Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01991

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,074,916	+		MPMX19_01990	0.73	+0.6
2,074,917	-		MPMX19_01990	0.74	+0.2
2,074,917	-		MPMX19_01990	0.74	-2.4
2,074,971	+		MPMX19_01990	0.75	-2.9
2,074,971	+		MPMX19_01990	0.75	+0.3
2,074,971	+		MPMX19_01990	0.75	+0.3
2,074,971	+		MPMX19_01990	0.75	-1.4
2,074,997	+		MPMX19_01990	0.76	-0.2
2,074,997	+		MPMX19_01990	0.76	-0.9
2,074,997	+		MPMX19_01990	0.76	-1.2
2,074,997	+		MPMX19_01990	0.76	-0.5
2,074,997	+		MPMX19_01990	0.76	+0.8
2,074,998	-		MPMX19_01990	0.76	-1.5
2,074,998	-		MPMX19_01990	0.76	+0.1
2,074,998	-		MPMX19_01990	0.76	-0.4
2,074,998	-		MPMX19_01990	0.76	-0.4
2,074,998	-		MPMX19_01990	0.76	-0.5
2,074,998	-		MPMX19_01990	0.76	-0.2
2,074,998	-		MPMX19_01990	0.76	-0.5
2,075,022	+		MPMX19_01990	0.77	-1.1
2,075,022	+		MPMX19_01990	0.77	-1.8
2,075,023	-		MPMX19_01990	0.77	+0.9
2,075,023	-		MPMX19_01990	0.77	+0.6
2,075,105	+		MPMX19_01990	0.80	-0.1
2,075,106	-		MPMX19_01990	0.80	+0.9
2,075,135	+		MPMX19_01990	0.81	-0.3
2,075,135	+		MPMX19_01990	0.81	-1.2
2,075,135	+		MPMX19_01990	0.81	+1.6
2,075,135	+		MPMX19_01990	0.81	+0.7
2,075,136	-		MPMX19_01990	0.81	+0.6
2,075,136	-		MPMX19_01990	0.81	+0.5
2,075,136	-		MPMX19_01990	0.81	-0.9
2,075,136	-		MPMX19_01990	0.81	-1.5
2,075,160	+		MPMX19_01990	0.82	-0.1
2,075,160	+		MPMX19_01990	0.82	-0.4
2,075,160	+		MPMX19_01990	0.82	+0.4
2,075,160	+		MPMX19_01990	0.82	-1.2
2,075,161	-		MPMX19_01990	0.82	-0.9
2,075,161	-		MPMX19_01990	0.82	+1.4
2,075,484	+				-0.7
2,075,484	+				+0.4
2,075,484	+				+0.5
2,075,484	+				-1.1
2,075,484	+				-0.8
2,075,485	-				+1.6
2,075,485	-				-1.8
2,075,485	-				-1.5
2,075,528	+				-1.2
2,075,529	-				-1.1
2,075,947	+				+0.1
2,075,947	+				-0.1
2,075,947	+				-0.4
2,075,947	+				+0.6
2,075,947	+				-1.1
2,075,948	-				+0.8
2,075,948	-				-0.5
2,075,948	-				-1.7
2,075,948	-				+0.1
2,075,948	-				-1.5
2,076,559	+		MPMX19_01991	0.20	-1.1
2,076,559	+		MPMX19_01991	0.20	+1.8
2,076,559	+		MPMX19_01991	0.20	-2.8
2,076,560	-		MPMX19_01991	0.20	-1.4
2,076,560	-		MPMX19_01991	0.20	-0.5
2,076,560	-		MPMX19_01991	0.20	-0.4
2,076,560	-		MPMX19_01991	0.20	+0.2
2,076,998	+		MPMX19_01991	0.32	-0.0
2,076,998	+		MPMX19_01991	0.32	-1.5
2,076,999	-		MPMX19_01991	0.32	+0.2
2,076,999	-		MPMX19_01991	0.32	-0.7
2,077,435	+		MPMX19_01991	0.43	-0.4
2,077,435	+		MPMX19_01991	0.43	+1.6
2,077,627	+		MPMX19_01991	0.48	+0.6
2,077,627	+		MPMX19_01991	0.48	+0.3
2,077,627	+		MPMX19_01991	0.48	+0.6
2,077,627	+		MPMX19_01991	0.48	+0.5
2,077,627	+		MPMX19_01991	0.48	-0.2
2,078,605	+		MPMX19_01991	0.75	+0.1
2,078,605	+		MPMX19_01991	0.75	-0.8
2,078,605	+		MPMX19_01991	0.75	+0.1
2,078,605	+		MPMX19_01991	0.75	+0.2
2,078,605	+		MPMX19_01991	0.75	+1.1
2,078,606	-		MPMX19_01991	0.75	-1.8
2,078,606	-		MPMX19_01991	0.75	+0.2
2,078,908	+		MPMX19_01991	0.83	-1.5
2,078,908	+		MPMX19_01991	0.83	-1.0
2,078,908	+		MPMX19_01991	0.83	+0.6
2,078,908	+		MPMX19_01991	0.83	+0.1
2,078,909	-		MPMX19_01991	0.83	-1.2
2,078,909	-		MPMX19_01991	0.83	-1.4
2,078,909	-		MPMX19_01991	0.83	-0.0
2,078,909	-		MPMX19_01991	0.83	+0.5
2,079,061	+		MPMX19_01991	0.87	-1.4
2,079,061	+		MPMX19_01991	0.87	+0.6
2,079,061	+		MPMX19_01991	0.87	+0.2
2,079,061	+		MPMX19_01991	0.87	-0.8
2,079,061	+		MPMX19_01991	0.87	+0.6
2,079,061	+		MPMX19_01991	0.87	-1.4
2,079,061	+		MPMX19_01991	0.87	-0.1
2,079,061	+		MPMX19_01991	0.87	-2.4
2,079,062	-		MPMX19_01991	0.87	-0.2
2,079,062	-		MPMX19_01991	0.87	-0.4
2,079,062	-		MPMX19_01991	0.87	-0.4
2,079,062	-		MPMX19_01991	0.87	-0.9
2,079,062	-		MPMX19_01991	0.87	-1.2
2,079,062	-		MPMX19_01991	0.87	+1.0
2,079,062	-		MPMX19_01991	0.87	+0.5
2,079,062	-		MPMX19_01991	0.87	+0.5
2,079,062	-		MPMX19_01991	0.87	-1.4
2,079,310	+				-0.6
2,079,310	+				+0.9
2,079,310	+				+0.6
2,079,310	+				-1.9
2,079,310	+				-0.4
2,079,540	+				-1.4
2,079,540	+				-0.5
2,079,540	+				-1.5
2,079,540	+				+1.1
2,079,540	+				+0.0
2,079,540	+				-1.1
2,079,540	+				-0.5
2,079,540	+				-0.2
2,079,540	+				-0.6
2,079,540	+				+0.8
2,079,541	-				+0.1
2,079,541	-				-0.7
2,079,541	-				-0.7
2,079,541	-				+0.9
2,079,541	-				+0.2
2,079,541	-				+0.1
2,079,541	-				+1.1
2,079,541	-				-2.1
2,079,541	-				+0.4
2,080,028	+		MPMX19_01992	0.34	-0.3
2,080,028	+		MPMX19_01992	0.34	-0.7
2,080,028	+		MPMX19_01992	0.34	-2.3
2,080,028	+		MPMX19_01992	0.34	-0.8
2,080,028	+		MPMX19_01992	0.34	+1.0
2,080,029	-		MPMX19_01992	0.34	-1.4
2,080,029	-		MPMX19_01992	0.34	-1.6
2,080,029	-		MPMX19_01992	0.34	-1.3
2,080,029	-		MPMX19_01992	0.34	+0.2
2,080,029	-		MPMX19_01992	0.34	-1.4
2,080,029	-		MPMX19_01992	0.34	-0.9
2,080,029	-		MPMX19_01992	0.34	-1.4
2,080,029	-		MPMX19_01992	0.34	-0.2
2,080,029	-		MPMX19_01992	0.34	-0.4
2,080,029	-		MPMX19_01992	0.34	-0.1
2,080,029	-		MPMX19_01992	0.34	-0.8
2,080,029	-		MPMX19_01992	0.34	-1.4
2,080,076	+		MPMX19_01992	0.37	-0.2
2,080,076	+		MPMX19_01992	0.37	+0.1
2,080,076	+		MPMX19_01992	0.37	+1.1
2,080,076	+		MPMX19_01992	0.37	-1.3
2,080,076	+		MPMX19_01992	0.37	+0.4
2,080,076	+		MPMX19_01992	0.37	+1.1
2,080,076	+		MPMX19_01992	0.37	+0.7
2,080,076	+		MPMX19_01992	0.37	-1.7
2,080,077	-		MPMX19_01992	0.38	-0.8
2,080,077	-		MPMX19_01992	0.38	+0.4
2,080,077	-		MPMX19_01992	0.38	-0.8
2,080,077	-		MPMX19_01992	0.38	+0.9
2,080,091	+		MPMX19_01992	0.39	+0.9
2,080,091	+		MPMX19_01992	0.39	+2.5
2,080,092	-		MPMX19_01992	0.39	+0.9
2,080,092	-		MPMX19_01992	0.39	-1.7
2,080,310	+		MPMX19_01992	0.56	-0.0
2,080,310	+		MPMX19_01992	0.56	-0.1
2,080,311	-		MPMX19_01992	0.56	-0.6
2,080,311	-		MPMX19_01992	0.56	+0.9
2,080,311	-		MPMX19_01992	0.56	+1.1
2,080,311	-		MPMX19_01992	0.56	-0.2
2,080,328	+		MPMX19_01992	0.57	+0.4
2,080,328	+		MPMX19_01992	0.57	-1.9
2,080,328	+		MPMX19_01992	0.57	-1.5
2,080,328	+		MPMX19_01992	0.57	+1.0
2,080,328	+		MPMX19_01992	0.57	+0.3
2,080,328	+		MPMX19_01992	0.57	+0.2
2,080,328	+		MPMX19_01992	0.57	+1.8
2,080,328	+		MPMX19_01992	0.57	+0.1
2,080,328	+		MPMX19_01992	0.57	-0.4
2,080,328	+		MPMX19_01992	0.57	-0.1
2,080,328	+		MPMX19_01992	0.57	+0.2
2,080,328	+		MPMX19_01992	0.57	+1.2
2,080,328	+		MPMX19_01992	0.57	-0.6
2,080,328	+		MPMX19_01992	0.57	-1.1
2,080,329	-		MPMX19_01992	0.57	-1.4
2,080,329	-		MPMX19_01992	0.57	+0.2
2,080,329	-		MPMX19_01992	0.57	+1.3
2,080,329	-		MPMX19_01992	0.57	-0.5
2,080,329	-		MPMX19_01992	0.57	+0.2
2,080,329	-		MPMX19_01992	0.57	-0.4
2,080,329	-		MPMX19_01992	0.57	-1.3
2,080,329	-		MPMX19_01992	0.57	-0.2
2,080,329	-		MPMX19_01992	0.57	-0.4
2,080,445	+		MPMX19_01992	0.67	+0.1
2,080,445	+		MPMX19_01992	0.67	+0.2
2,080,445	+		MPMX19_01992	0.67	-0.6
2,080,445	+		MPMX19_01992	0.67	-1.7
2,080,445	+		MPMX19_01992	0.67	-0.8
2,080,445	+		MPMX19_01992	0.67	+0.3
2,080,445	+		MPMX19_01992	0.67	+0.1
2,080,445	+		MPMX19_01992	0.67	-1.9
2,080,445	+		MPMX19_01992	0.67	+0.4
2,080,445	+		MPMX19_01992	0.67	+0.1
2,080,445	+		MPMX19_01992	0.67	-0.8
2,080,445	+		MPMX19_01992	0.67	-0.3
2,080,445	+		MPMX19_01992	0.67	-0.7
2,080,445	+		MPMX19_01992	0.67	-0.4
2,080,445	+		MPMX19_01992	0.67	-0.1
2,080,445	+		MPMX19_01992	0.67	-1.2
2,080,445	+		MPMX19_01992	0.67	-2.1
2,080,445	+		MPMX19_01992	0.67	-2.1
2,080,445	+		MPMX19_01992	0.67	-0.2
2,080,445	+		MPMX19_01992	0.67	-1.5
2,080,445	+		MPMX19_01992	0.67	+0.2
2,080,445	+		MPMX19_01992	0.67	+0.4
2,080,446	-		MPMX19_01992	0.67	-0.3
2,080,446	-		MPMX19_01992	0.67	-0.6
2,080,446	-		MPMX19_01992	0.67	-1.8
2,080,446	-		MPMX19_01992	0.67	-0.9
2,080,446	-		MPMX19_01992	0.67	+0.1
2,080,446	-		MPMX19_01992	0.67	-0.6
2,080,446	-		MPMX19_01992	0.67	-0.9
2,080,446	-		MPMX19_01992	0.67	-0.9
2,080,446	-		MPMX19_01992	0.67	+1.6
2,080,446	-		MPMX19_01992	0.67	+0.6
2,080,446	-		MPMX19_01992	0.67	+1.0
2,080,446	-		MPMX19_01992	0.67	-0.4
2,080,446	-		MPMX19_01992	0.67	-2.3
2,080,446	-		MPMX19_01992	0.67	-0.1
2,080,446	-		MPMX19_01992	0.67	-0.9
2,080,446	-		MPMX19_01992	0.67	-0.6
2,080,446	-		MPMX19_01992	0.67	+0.3
2,080,446	-		MPMX19_01992	0.67	-0.7
2,080,446	-		MPMX19_01992	0.67	-0.5
2,080,517	+		MPMX19_01992	0.72	+1.5
2,080,517	+		MPMX19_01992	0.72	-1.4
2,080,517	+		MPMX19_01992	0.72	+0.2
2,080,517	+		MPMX19_01992	0.72	-1.8
2,080,517	+		MPMX19_01992	0.72	+0.4
2,080,517	+		MPMX19_01992	0.72	-1.2
2,080,517	+		MPMX19_01992	0.72	-0.1
2,080,517	+		MPMX19_01992	0.72	-1.2
2,080,518	-		MPMX19_01992	0.72	+0.2
2,080,518	-		MPMX19_01992	0.72	-1.0
2,080,518	-		MPMX19_01992	0.72	-0.0
2,080,518	-		MPMX19_01992	0.72	+0.9
2,080,518	-		MPMX19_01992	0.72	-1.2