Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01756

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,843,903	+				+0.1
1,843,966	+		MPMX19_01754	0.13	+0.3
1,843,966	+		MPMX19_01754	0.13	-0.8
1,843,966	+		MPMX19_01754	0.13	-2.0
1,843,966	+		MPMX19_01754	0.13	+0.1
1,843,967	-		MPMX19_01754	0.13	-1.4
1,843,967	-		MPMX19_01754	0.13	+0.8
1,843,967	-		MPMX19_01754	0.13	-0.2
1,843,967	-		MPMX19_01754	0.13	-0.9
1,843,967	-		MPMX19_01754	0.13	-0.5
1,844,233	+		MPMX19_01754	0.68	-0.1
1,844,233	+		MPMX19_01754	0.68	-2.3
1,844,233	+		MPMX19_01754	0.68	-0.3
1,844,233	+		MPMX19_01754	0.68	-1.5
1,844,234	-		MPMX19_01754	0.68	-0.4
1,844,234	-		MPMX19_01754	0.68	-1.7
1,844,234	-		MPMX19_01754	0.68	-0.8
1,844,234	-		MPMX19_01754	0.68	-0.8
1,844,234	-		MPMX19_01754	0.68	+0.1
1,844,234	-		MPMX19_01754	0.68	-1.4
1,844,234	-		MPMX19_01754	0.68	+0.2
1,844,234	-		MPMX19_01754	0.68	-0.3
1,844,234	-		MPMX19_01754	0.68	-0.5
1,844,472	+				-0.4
1,844,472	+				-1.2
1,844,473	-				-0.7
1,844,473	-				-1.3
1,844,473	-				-1.7
1,844,473	-				-1.7
1,844,473	-				+0.1
1,844,658	+		MPMX19_01755	0.48	+1.1
1,844,658	+		MPMX19_01755	0.48	-0.8
1,844,658	+		MPMX19_01755	0.48	-1.5
1,844,658	+		MPMX19_01755	0.48	+0.4
1,844,658	+		MPMX19_01755	0.48	-0.7
1,844,658	+		MPMX19_01755	0.48	+0.8
1,844,658	+		MPMX19_01755	0.48	+0.1
1,844,658	+		MPMX19_01755	0.48	-0.1
1,844,659	-		MPMX19_01755	0.48	-0.7
1,844,667	+		MPMX19_01755	0.50	-0.2
1,844,667	+		MPMX19_01755	0.50	-1.5
1,844,668	-		MPMX19_01755	0.50	+0.4
1,844,847	+				+1.0
1,844,847	+				-1.2
1,844,847	+				-0.5
1,844,848	-				-0.2
1,844,848	-				-0.9
1,844,848	-				-0.8
1,844,848	-				-0.7
1,844,848	-				-0.9
1,844,848	-				+0.9
1,844,848	-				+0.3
1,844,848	-				-1.0
1,844,848	-				+1.4
1,844,848	-				-0.4
1,844,856	+				-1.0
1,844,856	+				-0.2
1,844,856	+				-0.7
1,844,856	+				+0.0
1,844,856	+				-0.7
1,844,856	+				+0.2
1,844,857	-				-0.7
1,844,857	-				+0.5
1,844,857	-				-2.1
1,844,857	-				-0.4
1,844,857	-				-0.3
1,844,857	-				-0.2
1,844,857	-				-0.3
1,844,857	-				+0.0
1,844,860	+				+0.5
1,844,860	+				-0.8
1,844,860	+				-0.7
1,844,860	+				+0.8
1,844,860	+				+0.0
1,844,860	+				+1.5
1,844,860	+				+1.3
1,844,860	+				-1.8
1,844,860	+				+0.2
1,844,860	+				-0.6
1,844,860	+				-0.1
1,844,860	+				-2.0
1,844,860	+				-1.0
1,844,860	+				+0.1
1,844,860	+				-0.6
1,844,860	+				+1.3
1,844,860	+				+0.4
1,844,860	+				-1.0
1,844,860	+				-2.1
1,844,861	-				-1.9
1,844,861	-				+0.1
1,844,861	-				-1.8
1,844,861	-				-0.3
1,844,861	-				+0.3
1,844,861	-				+0.0
1,844,861	-				-0.5
1,844,861	-				-0.1
1,844,861	-				+0.2
1,844,861	-				+1.6
1,844,861	-				+0.6
1,844,861	-				+0.2
1,844,861	-				+0.9
1,844,861	-				-0.2
1,844,861	-				-0.2
1,844,861	-				-1.7
1,844,861	-				-0.0
1,844,861	-				-0.3
1,844,861	-				-0.7
1,844,861	-				+1.6
1,844,861	-				-1.1
1,844,861	-				+1.0
1,844,861	-				-0.6
1,845,319	+				-1.6
1,845,319	+				-0.3
1,845,319	+				+0.6
1,845,319	+				-1.1
1,845,319	+				+0.0
1,845,319	+				+0.1
1,845,319	+				+0.0
1,845,319	+				+0.3
1,845,319	+				-1.2
1,845,319	+				-0.3
1,845,319	+				-1.7
1,845,319	+				+0.6
1,845,319	+				-1.4
1,845,319	+				-0.7
1,845,319	+				-0.5
1,845,320	-				+0.4
1,845,320	-				+0.3
1,845,320	-				+0.6
1,845,320	-				-0.4
1,845,320	-				-0.6
1,845,320	-				-0.4
1,845,320	-				-0.9
1,845,320	-				-0.9
1,845,320	-				-1.4
1,845,320	-				-0.4
1,845,320	-				-0.5
1,845,320	-				-1.6
1,845,320	-				-0.3
1,845,320	-				-0.3
1,845,320	-				-1.1
1,845,320	-				-0.2
1,845,320	-				-1.8
1,845,353	+				+0.6
1,845,354	-				+0.5
1,845,354	-				-1.3
1,845,358	+				-0.1
1,845,359	-				-0.4
1,845,359	-				-0.4
1,845,359	-				+1.6
1,845,359	-				+0.0
1,845,396	-				+1.3
1,845,478	+				-1.2
1,845,478	+				+0.1
1,845,478	+				+0.2
1,845,478	+				-1.0
1,845,478	+				-0.4
1,845,478	+				+0.3
1,845,478	+				+1.3
1,845,478	+				+1.5
1,845,478	+				+0.0
1,845,478	+				-1.0
1,845,478	+				+0.2
1,845,478	+				-0.4
1,845,478	+				-0.4
1,845,478	+				-0.1
1,845,478	+				-0.1
1,845,478	+				+0.3
1,845,478	+				-1.7
1,845,478	+				-0.4
1,845,478	+				-2.1
1,845,478	+				-0.3
1,845,479	-				-2.2
1,845,479	-				+0.3
1,845,479	-				-0.7
1,845,479	-				+0.4
1,845,479	-				-1.3
1,845,479	-				-0.2
1,845,479	-				-0.4
1,845,479	-				+0.7
1,845,479	-				+0.2
1,845,479	-				-1.5
1,845,479	-				-1.4
1,845,479	-				-1.4
1,845,479	-				-1.8
1,845,479	-				-0.7
1,845,479	-				+0.4
1,845,479	-				+0.6
1,845,479	-				-1.2
1,845,479	-				+0.0
1,845,479	-				+0.6
1,845,479	-				-2.0
1,845,479	-				-1.8
1,845,479	-				-1.5
1,845,479	-				+0.0
1,845,479	-				+0.1
1,845,479	-				-1.0
1,845,479	-				+0.2
1,845,505	+				+0.2
1,845,505	+				+0.6
1,845,505	+				-1.4
1,845,505	+				-1.4
1,845,505	+				-0.6
1,845,505	+				+0.0
1,845,506	-				+0.2
1,845,506	-				-0.7
1,845,506	-				-2.0
1,845,506	-				+2.3
1,845,506	-				-1.4
1,845,506	-				-1.0
1,845,506	-				-0.7
1,845,868	+		MPMX19_01757	0.44	+2.2
1,845,868	+		MPMX19_01757	0.44	-0.2
1,845,868	+		MPMX19_01757	0.44	-0.1
1,845,868	+		MPMX19_01757	0.44	+1.6
1,845,869	-		MPMX19_01757	0.44	-1.4
1,845,869	-		MPMX19_01757	0.44	-1.5
1,845,880	+		MPMX19_01757	0.46	+0.2
1,845,880	+		MPMX19_01757	0.46	-0.4
1,845,880	+		MPMX19_01757	0.46	+0.6
1,845,880	+		MPMX19_01757	0.46	-0.4
1,845,880	+		MPMX19_01757	0.46	+0.8
1,845,880	+		MPMX19_01757	0.46	+0.1
1,845,880	+		MPMX19_01757	0.46	-0.8
1,845,880	+		MPMX19_01757	0.46	-1.1
1,845,880	+		MPMX19_01757	0.46	-2.1
1,845,881	-		MPMX19_01757	0.46	-1.4
1,845,881	-		MPMX19_01757	0.46	-0.2
1,845,881	-		MPMX19_01757	0.46	+0.5
1,845,881	-		MPMX19_01757	0.46	+0.6
1,845,881	-		MPMX19_01757	0.46	-0.3
1,845,881	-		MPMX19_01757	0.46	+0.3
1,845,881	-		MPMX19_01757	0.46	-0.3
1,845,900	+		MPMX19_01757	0.48	+1.4
1,845,900	+		MPMX19_01757	0.48	+1.2
1,845,901	-		MPMX19_01757	0.48	+1.2