Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01353

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,406,857	+		MPMX19_01351	0.71	+0.0
1,406,857	+		MPMX19_01351	0.71	+0.9
1,406,857	+		MPMX19_01351	0.71	-0.1
1,406,857	+		MPMX19_01351	0.71	-1.4
1,406,857	+		MPMX19_01351	0.71	-0.8
1,406,857	+		MPMX19_01351	0.71	-0.8
1,406,857	+		MPMX19_01351	0.71	-1.0
1,406,857	+		MPMX19_01351	0.71	-0.9
1,406,857	+		MPMX19_01351	0.71	-1.6
1,406,858	-		MPMX19_01351	0.71	-1.0
1,406,858	-		MPMX19_01351	0.71	+0.4
1,406,858	-		MPMX19_01351	0.71	+0.8
1,406,858	-		MPMX19_01351	0.71	-0.8
1,406,858	-		MPMX19_01351	0.71	+0.4
1,406,858	-		MPMX19_01351	0.71	-1.0
1,406,858	-		MPMX19_01351	0.71	-1.6
1,406,858	-		MPMX19_01351	0.71	-0.0
1,406,974	+				+0.5
1,406,974	+				-1.2
1,406,974	+				+2.0
1,406,974	+				+0.0
1,406,974	+				+1.6
1,406,974	+				+1.6
1,406,974	+				-2.6
1,406,974	+				-0.4
1,406,974	+				-1.6
1,406,974	+				-0.2
1,406,974	+				-1.0
1,406,974	+				+0.6
1,406,974	+				-0.4
1,406,974	+				-0.6
1,406,974	+				-1.4
1,406,974	+				+0.1
1,406,974	+				-0.6
1,406,974	+				-0.0
1,406,974	+				-0.2
1,406,974	+				-0.7
1,406,974	+				+0.3
1,406,974	+				-0.0
1,406,974	+				+0.5
1,406,974	+				-0.9
1,406,974	+				-1.8
1,406,974	+				+1.6
1,406,974	+				-2.2
1,406,974	+				-2.2
1,406,974	+				-1.0
1,406,974	+				+0.6
1,406,974	+				+0.1
1,406,974	+				-0.3
1,406,974	+				-0.9
1,406,974	+				-1.8
1,406,974	+				-1.5
1,406,974	+				-0.2
1,406,974	+				-0.2
1,406,974	+				-1.3
1,406,974	-				-0.8
1,406,975	-				-2.9
1,406,975	-				-1.2
1,406,975	-				-0.3
1,406,975	-				-1.5
1,406,975	-				+0.6
1,406,975	-				-1.0
1,406,975	-				+0.4
1,406,975	-				+0.2
1,406,975	-				-1.8
1,406,975	-				-0.7
1,406,975	-				-1.2
1,406,975	-				+0.1
1,406,975	-				-1.1
1,406,975	-				+0.3
1,406,975	-				+0.9
1,406,975	-				-1.8
1,406,975	-				-0.0
1,406,975	-				+1.2
1,406,975	-				+0.6
1,406,975	-				+0.3
1,406,975	-				-1.2
1,406,975	-				-0.1
1,406,975	-				-1.7
1,406,975	-				+0.2
1,406,975	-				-0.9
1,406,975	-				-0.6
1,406,975	-				+0.7
1,406,975	-				-0.0
1,406,975	-				+0.1
1,406,975	-				-1.1
1,406,975	-				-0.5
1,406,975	-				-0.0
1,406,975	-				-0.7
1,406,975	-				+0.6
1,406,981	+				-0.4
1,406,981	+				+0.6
1,406,981	+				-0.4
1,406,981	+				+1.0
1,406,981	+				+0.3
1,406,981	+				+0.2
1,406,981	+				+0.6
1,406,981	+				+0.4
1,406,981	+				+0.9
1,406,981	+				+0.2
1,406,981	+				+0.2
1,406,981	+				+1.0
1,406,981	+				+1.1
1,406,981	+				-1.2
1,406,981	+				-0.8
1,406,981	+				+1.2
1,406,981	+				+1.0
1,406,981	+				+0.6
1,406,981	+				-1.4
1,406,981	+				-0.8
1,406,981	+				-0.4
1,406,982	-				+0.8
1,406,982	-				-0.1
1,406,982	-				-1.2
1,406,982	-				-1.4
1,406,982	-				-0.4
1,406,982	-				-1.2
1,406,982	-				+0.3
1,406,982	-				+0.3
1,406,982	-				-0.8
1,406,982	-				+1.3
1,406,983	-				+0.2
1,406,986	+				-1.8
1,406,987	-				-1.2
1,406,987	-				-0.9
1,406,987	-				-1.7
1,407,034	+		MPMX19_01352	0.11	-0.2
1,407,035	-		MPMX19_01352	0.11	-0.7
1,407,035	-		MPMX19_01352	0.11	+0.2
1,407,035	-		MPMX19_01352	0.11	+0.3
1,407,035	-		MPMX19_01352	0.11	-1.0
1,407,142	+		MPMX19_01352	0.28	-1.6
1,407,142	+		MPMX19_01352	0.28	+0.2
1,407,142	+		MPMX19_01352	0.28	+0.9
1,407,142	+		MPMX19_01352	0.28	+1.1
1,407,142	+		MPMX19_01352	0.28	-1.7
1,407,143	-		MPMX19_01352	0.28	-0.5
1,407,143	-		MPMX19_01352	0.28	+0.3
1,407,143	-		MPMX19_01352	0.28	-0.5
1,407,143	-		MPMX19_01352	0.28	+0.6
1,407,143	-		MPMX19_01352	0.28	+0.2
1,407,143	-		MPMX19_01352	0.28	+0.3
1,407,143	-		MPMX19_01352	0.28	+0.6
1,407,143	-		MPMX19_01352	0.28	+0.1
1,407,376	+		MPMX19_01352	0.63	+0.2
1,407,377	-		MPMX19_01352	0.63	-1.1
1,407,377	-		MPMX19_01352	0.63	-0.4
1,407,502	+		MPMX19_01352	0.82	-0.5
1,407,502	+		MPMX19_01352	0.82	+0.3
1,407,502	+		MPMX19_01352	0.82	+0.2
1,407,502	+		MPMX19_01352	0.82	+0.7
1,407,654	+				-0.4
1,407,654	+				-0.8
1,407,654	+				-0.5
1,407,654	+				-1.9
1,407,654	+				-0.9
1,407,655	-				+0.5
1,407,655	-				-1.8
1,407,655	-				-2.7
1,407,655	-				-0.1
1,407,885	+		MPMX19_01353	0.73	-0.4
1,407,885	+		MPMX19_01353	0.73	-0.0
1,407,885	+		MPMX19_01353	0.73	-1.2
1,407,885	+		MPMX19_01353	0.73	-1.2
1,407,886	-		MPMX19_01353	0.74	-0.1
1,407,886	-		MPMX19_01353	0.74	-0.8
1,407,991	+				+1.1
1,407,992	-				-1.2
1,408,009	+				-0.4
1,408,009	+				-0.1
1,408,009	+				-0.4
1,408,021	-				-0.4
1,408,040	-				+0.4
1,408,182	+				+0.6
1,408,182	+				-0.0
1,408,182	+				+0.6
1,408,182	+				-0.1
1,408,182	+				-0.1
1,408,183	-				+1.2
1,408,183	-				-0.7
1,408,227	-				-0.2
1,408,304	+				-0.1
1,408,305	-				+0.7
1,408,305	-				-0.1
1,408,305	-				-0.4
1,408,305	-				-0.2
1,408,343	+		MPMX19_01354	0.12	-0.0
1,408,343	+		MPMX19_01354	0.12	-1.2
1,408,343	+		MPMX19_01354	0.12	-0.2
1,408,343	+		MPMX19_01354	0.12	-0.3
1,408,343	+		MPMX19_01354	0.12	-0.0
1,408,343	+		MPMX19_01354	0.12	-1.4
1,408,344	-		MPMX19_01354	0.12	-0.4
1,408,344	-		MPMX19_01354	0.12	-1.9
1,408,344	-		MPMX19_01354	0.12	-0.5
1,408,344	-		MPMX19_01354	0.12	+0.6
1,408,349	+		MPMX19_01354	0.12	-0.9
1,408,349	+		MPMX19_01354	0.12	+0.1
1,408,349	+		MPMX19_01354	0.12	+0.2
1,408,349	+		MPMX19_01354	0.12	+0.8
1,408,349	+		MPMX19_01354	0.12	-0.0
1,408,349	+		MPMX19_01354	0.12	-1.2
1,408,349	+		MPMX19_01354	0.12	-0.0
1,408,349	+		MPMX19_01354	0.12	-0.4
1,408,349	+		MPMX19_01354	0.12	+0.6
1,408,349	+		MPMX19_01354	0.12	-0.8
1,408,349	+		MPMX19_01354	0.12	+0.3
1,408,349	+		MPMX19_01354	0.12	-1.3
1,408,349	+		MPMX19_01354	0.12	-1.9
1,408,349	+		MPMX19_01354	0.12	-0.6
1,408,349	+		MPMX19_01354	0.12	-0.0
1,408,349	+		MPMX19_01354	0.12	-0.3
1,408,349	+		MPMX19_01354	0.12	-0.2
1,408,349	+		MPMX19_01354	0.12	-1.5
1,408,349	+		MPMX19_01354	0.12	-2.9
1,408,349	+		MPMX19_01354	0.12	-0.8
1,408,349	+		MPMX19_01354	0.12	-0.8
1,408,349	+		MPMX19_01354	0.12	+0.2
1,408,349	+		MPMX19_01354	0.12	+0.8
1,408,349	+		MPMX19_01354	0.12	-0.6
1,408,349	+		MPMX19_01354	0.12	-0.4
1,408,349	+		MPMX19_01354	0.12	-0.4
1,408,349	+		MPMX19_01354	0.12	+0.5
1,408,349	+		MPMX19_01354	0.12	-0.2
1,408,349	+		MPMX19_01354	0.12	+1.2
1,408,349	+		MPMX19_01354	0.12	+0.4
1,408,349	+		MPMX19_01354	0.12	+0.6
1,408,349	+		MPMX19_01354	0.12	-0.3
1,408,350	-		MPMX19_01354	0.12	+0.6
1,408,350	-		MPMX19_01354	0.12	-0.7
1,408,350	-		MPMX19_01354	0.12	+0.8
1,408,350	-		MPMX19_01354	0.12	-0.6
1,408,350	-		MPMX19_01354	0.12	-0.2
1,408,350	-		MPMX19_01354	0.12	+0.7
1,408,350	-		MPMX19_01354	0.12	+0.4
1,408,350	-		MPMX19_01354	0.12	-0.2
1,408,350	-		MPMX19_01354	0.12	-0.0
1,408,350	-		MPMX19_01354	0.12	-0.0
1,408,350	-		MPMX19_01354	0.12	-0.6
1,408,350	-		MPMX19_01354	0.12	-0.7
1,408,350	-		MPMX19_01354	0.12	-0.1
1,408,350	-		MPMX19_01354	0.12	-1.8
1,408,350	-		MPMX19_01354	0.12	+0.3
1,408,350	-		MPMX19_01354	0.12	-0.1
1,408,350	-		MPMX19_01354	0.12	-0.9
1,408,350	-		MPMX19_01354	0.12	+0.1
1,408,350	-		MPMX19_01354	0.12	-0.9
1,408,350	-		MPMX19_01354	0.12	-0.8
1,408,350	-		MPMX19_01354	0.12	-0.7
1,408,350	-		MPMX19_01354	0.12	-0.0
1,408,350	-		MPMX19_01354	0.12	+0.9
1,408,350	-		MPMX19_01354	0.12	-1.2
1,408,350	-		MPMX19_01354	0.12	-1.1
1,408,350	-		MPMX19_01354	0.12	+0.3
1,408,350	-		MPMX19_01354	0.12	+0.6
1,408,350	-		MPMX19_01354	0.12	-1.0
1,408,350	-		MPMX19_01354	0.12	-0.2
1,408,350	-		MPMX19_01354	0.12	-1.0
1,408,454	+		MPMX19_01354	0.18	-2.1
1,408,454	+		MPMX19_01354	0.18	+0.6
1,408,454	+		MPMX19_01354	0.18	+0.1
1,408,454	+		MPMX19_01354	0.18	+1.4
1,408,454	+		MPMX19_01354	0.18	-0.3
1,408,454	+		MPMX19_01354	0.18	+0.3
1,408,454	+		MPMX19_01354	0.18	-0.4
1,408,454	+		MPMX19_01354	0.18	-0.8
1,408,454	+		MPMX19_01354	0.18	-0.9
1,408,454	+		MPMX19_01354	0.18	+1.2
1,408,454	+		MPMX19_01354	0.18	-0.4
1,408,454	+		MPMX19_01354	0.18	+0.7
1,408,454	+		MPMX19_01354	0.18	-2.8
1,408,455	-		MPMX19_01354	0.18	-0.8
1,408,455	-		MPMX19_01354	0.18	-0.2
1,408,455	-		MPMX19_01354	0.18	-0.5
1,408,455	-		MPMX19_01354	0.18	-0.4
1,408,455	-		MPMX19_01354	0.18	-1.1
1,408,455	-		MPMX19_01354	0.18	-0.1
1,408,455	-		MPMX19_01354	0.18	+0.6
1,408,455	-		MPMX19_01354	0.18	-1.6
1,408,455	-		MPMX19_01354	0.18	-0.5
1,408,455	-		MPMX19_01354	0.18	-0.2
1,408,455	-		MPMX19_01354	0.18	-0.8
1,408,455	-		MPMX19_01354	0.18	-0.5
1,408,455	-		MPMX19_01354	0.18	-1.0
1,408,455	-		MPMX19_01354	0.18	-0.4
1,408,455	-		MPMX19_01354	0.18	+1.2
1,408,455	-		MPMX19_01354	0.18	-1.4
1,408,455	-		MPMX19_01354	0.18	-0.6
1,408,455	-		MPMX19_01354	0.18	+0.4
1,408,455	-		MPMX19_01354	0.18	+0.7
1,408,455	-		MPMX19_01354	0.18	-1.0
1,408,466	+		MPMX19_01354	0.19	-0.8
1,408,466	+		MPMX19_01354	0.19	+0.1
1,408,466	+		MPMX19_01354	0.19	-0.7
1,408,466	+		MPMX19_01354	0.19	-0.9
1,408,466	+		MPMX19_01354	0.19	-0.4
1,408,466	+		MPMX19_01354	0.19	-1.2
1,408,466	+		MPMX19_01354	0.19	-0.0
1,408,467	-		MPMX19_01354	0.19	-1.9
1,408,467	-		MPMX19_01354	0.19	-2.3
1,408,467	-		MPMX19_01354	0.19	+1.3
1,408,467	-		MPMX19_01354	0.19	-0.8
1,408,467	-		MPMX19_01354	0.19	+0.6
1,408,467	-		MPMX19_01354	0.19	-0.0
1,408,467	-		MPMX19_01354	0.19	+0.9
1,408,467	-		MPMX19_01354	0.19	-0.6
1,408,505	+		MPMX19_01354	0.21	-1.7
1,408,505	+		MPMX19_01354	0.21	-1.2
1,408,505	+		MPMX19_01354	0.21	+0.6
1,408,505	+		MPMX19_01354	0.21	-0.3
1,408,505	+		MPMX19_01354	0.21	-0.4
1,408,505	+		MPMX19_01354	0.21	-1.4
1,408,505	+		MPMX19_01354	0.21	-1.3
1,408,505	+		MPMX19_01354	0.21	+0.2
1,408,505	+		MPMX19_01354	0.21	-1.0
1,408,505	+		MPMX19_01354	0.21	+1.0
1,408,505	+		MPMX19_01354	0.21	-0.3
1,408,506	-		MPMX19_01354	0.21	-0.8
1,408,506	-		MPMX19_01354	0.21	-0.2
1,408,506	-		MPMX19_01354	0.21	+0.2
1,408,506	-		MPMX19_01354	0.21	-0.8
1,408,506	-		MPMX19_01354	0.21	-0.0
1,408,506	-		MPMX19_01354	0.21	-0.1
1,408,506	-		MPMX19_01354	0.21	-1.1
1,408,506	-		MPMX19_01354	0.21	+1.0
1,408,506	-		MPMX19_01354	0.21	+0.6
1,408,506	-		MPMX19_01354	0.21	-0.2
1,408,506	-		MPMX19_01354	0.21	-0.5
1,408,506	-		MPMX19_01354	0.21	-0.6
1,408,506	-		MPMX19_01354	0.21	+0.2
1,408,506	-		MPMX19_01354	0.21	+0.2
1,408,517	+		MPMX19_01354	0.22	-0.4
1,408,517	+		MPMX19_01354	0.22	-0.0
1,408,517	+		MPMX19_01354	0.22	+0.2
1,408,517	+		MPMX19_01354	0.22	-2.0
1,408,517	+		MPMX19_01354	0.22	-1.2
1,408,518	-		MPMX19_01354	0.22	-0.0
1,408,518	-		MPMX19_01354	0.22	+0.0
1,408,518	-		MPMX19_01354	0.22	+0.4
1,408,518	-		MPMX19_01354	0.22	+0.2
1,408,518	-		MPMX19_01354	0.22	-0.1
1,408,518	-		MPMX19_01354	0.22	-0.2
1,408,595	+		MPMX19_01354	0.26	+0.2
1,408,596	-		MPMX19_01354	0.26	-0.6
1,408,830	-		MPMX19_01354	0.40	-1.0
1,408,830	-		MPMX19_01354	0.40	-0.6
1,408,830	-		MPMX19_01354	0.40	-1.7
1,408,830	-		MPMX19_01354	0.40	-1.0
1,408,830	-		MPMX19_01354	0.40	-2.2
1,408,830	-		MPMX19_01354	0.40	-0.2
1,408,830	-		MPMX19_01354	0.40	+0.2
1,408,830	-		MPMX19_01354	0.40	+0.8
1,408,830	-		MPMX19_01354	0.40	-0.7
1,408,830	-		MPMX19_01354	0.40	-0.1
1,408,830	-		MPMX19_01354	0.40	-0.3
1,408,830	-		MPMX19_01354	0.40	+1.0
1,408,830	-		MPMX19_01354	0.40	+0.5