Strain Fitness in Sphingobium sp. HT1-2 around GFF1370

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,392,293	+		GFF1369	0.15	-0.4
1,392,293	-		GFF1369	0.15	-1.2
1,392,307	-		GFF1369	0.16	-2.0
1,392,324	-		GFF1369	0.18	+0.3
1,392,324	-		GFF1369	0.18	+0.2
1,392,341	+		GFF1369	0.19	-0.0
1,392,341	+		GFF1369	0.19	+0.3
1,392,347	+		GFF1369	0.20	-1.0
1,392,349	-		GFF1369	0.20	-0.1
1,392,349	-		GFF1369	0.20	-1.0
1,392,355	-		GFF1369	0.20	-0.6
1,392,394	+		GFF1369	0.24	-0.2
1,392,394	+		GFF1369	0.24	-0.1
1,392,399	+		GFF1369	0.24	-1.6
1,392,399	+		GFF1369	0.24	-1.9
1,392,399	+		GFF1369	0.24	+0.4
1,392,404	+		GFF1369	0.25	-0.7
1,392,404	+		GFF1369	0.25	-0.6
1,392,407	-		GFF1369	0.25	-0.7
1,392,407	-		GFF1369	0.25	-0.9
1,392,407	-		GFF1369	0.25	-0.6
1,392,412	-		GFF1369	0.25	-0.2
1,392,412	-		GFF1369	0.25	-0.7
1,392,422	+		GFF1369	0.26	-1.4
1,392,422	-		GFF1369	0.26	-0.8
1,392,430	-		GFF1369	0.27	-0.2
1,392,432	+		GFF1369	0.27	-0.4
1,392,443	+		GFF1369	0.28	-0.2
1,392,446	+		GFF1369	0.28	-0.9
1,392,450	+		GFF1369	0.29	-0.6
1,392,454	+		GFF1369	0.29	-0.5
1,392,454	-		GFF1369	0.29	+1.6
1,392,475	-		GFF1369	0.31	-0.8
1,392,520	+		GFF1369	0.35	-0.9
1,392,528	-		GFF1369	0.35	+1.4
1,392,543	-		GFF1369	0.37	-0.0
1,392,543	-		GFF1369	0.37	-0.1
1,392,562	+		GFF1369	0.38	-1.6
1,392,570	-		GFF1369	0.39	-0.9
1,392,571	-		GFF1369	0.39	+0.5
1,392,571	-		GFF1369	0.39	+0.9
1,392,585	+		GFF1369	0.40	+0.2
1,392,590	-		GFF1369	0.41	-2.3
1,392,593	-		GFF1369	0.41	-1.2
1,392,593	-		GFF1369	0.41	+0.3
1,392,593	-		GFF1369	0.41	-0.9
1,392,604	+		GFF1369	0.42	+0.5
1,392,604	+		GFF1369	0.42	-0.5
1,392,604	+		GFF1369	0.42	+0.9
1,392,604	+		GFF1369	0.42	-0.4
1,392,604	+		GFF1369	0.42	-0.6
1,392,604	+		GFF1369	0.42	+1.7
1,392,604	+		GFF1369	0.42	+0.2
1,392,604	+		GFF1369	0.42	-1.0
1,392,604	+		GFF1369	0.42	-1.1
1,392,604	+		GFF1369	0.42	-0.2
1,392,604	+		GFF1369	0.42	-0.6
1,392,604	+		GFF1369	0.42	-0.4
1,392,604	+		GFF1369	0.42	-1.1
1,392,604	+		GFF1369	0.42	-0.2
1,392,612	-		GFF1369	0.43	-0.5
1,392,612	-		GFF1369	0.43	-1.3
1,392,612	-		GFF1369	0.43	+0.9
1,392,612	-		GFF1369	0.43	-1.7
1,392,612	-		GFF1369	0.43	-1.1
1,392,612	-		GFF1369	0.43	+0.5
1,392,612	-		GFF1369	0.43	+1.8
1,392,648	+		GFF1369	0.46	+1.4
1,392,656	-		GFF1369	0.46	-0.4
1,392,676	+		GFF1369	0.48	-2.3
1,392,677	+		GFF1369	0.48	+0.8
1,392,677	+		GFF1369	0.48	-0.2
1,392,677	+		GFF1369	0.48	-0.8
1,392,677	+		GFF1369	0.48	-1.6
1,392,677	+		GFF1369	0.48	-0.3
1,392,677	+		GFF1369	0.48	-0.1
1,392,684	-		GFF1369	0.49	-1.2
1,392,684	-		GFF1369	0.49	+0.3
1,392,684	-		GFF1369	0.49	+1.9
1,392,684	-		GFF1369	0.49	-2.9
1,392,685	-		GFF1369	0.49	-0.9
1,392,685	-		GFF1369	0.49	+0.2
1,392,685	-		GFF1369	0.49	-1.7
1,392,685	-		GFF1369	0.49	-0.1
1,392,685	-		GFF1369	0.49	-0.0
1,392,685	-		GFF1369	0.49	-0.4
1,392,685	-		GFF1369	0.49	-0.6
1,392,685	-		GFF1369	0.49	+1.0
1,392,687	+		GFF1369	0.49	+0.0
1,392,687	+		GFF1369	0.49	-0.3
1,392,687	+		GFF1369	0.49	-0.3
1,392,695	-		GFF1369	0.50	-0.7
1,392,695	-		GFF1369	0.50	-0.8
1,392,712	+		GFF1369	0.51	+0.6
1,392,715	+		GFF1369	0.52	+0.5
1,392,715	-		GFF1369	0.52	-1.6
1,392,720	-		GFF1369	0.52	-0.1
1,392,727	+		GFF1369	0.53	-0.8
1,392,732	+		GFF1369	0.53	-0.4
1,392,736	-		GFF1369	0.53	+0.4
1,392,746	-		GFF1369	0.54	+0.1
1,392,746	-		GFF1369	0.54	-0.9
1,392,746	-		GFF1369	0.54	+1.0
1,392,757	+		GFF1369	0.55	-0.6
1,392,757	+		GFF1369	0.55	+0.3
1,392,757	+		GFF1369	0.55	+1.2
1,392,765	-		GFF1369	0.56	-1.4
1,392,765	-		GFF1369	0.56	+0.4
1,392,765	-		GFF1369	0.56	+0.4
1,392,790	+		GFF1369	0.58	+0.2
1,392,794	+		GFF1369	0.58	-0.9
1,392,799	+		GFF1369	0.59	-0.5
1,392,807	-		GFF1369	0.60	+0.1
1,392,811	+		GFF1369	0.60	-2.4
1,392,813	+		GFF1369	0.60	-0.6
1,392,813	+		GFF1369	0.60	+0.6
1,392,820	+		GFF1369	0.61	-0.4
1,392,831	+		GFF1369	0.62	-1.2
1,392,869	-		GFF1369	0.65	-0.9
1,392,877	+		GFF1369	0.66	-0.5
1,392,877	+		GFF1369	0.66	+0.5
1,392,882	+		GFF1369	0.66	-1.9
1,392,882	+		GFF1369	0.66	-0.5
1,392,885	-		GFF1369	0.66	+0.4
1,392,887	+		GFF1369	0.66	+1.0
1,392,892	+		GFF1369	0.67	-1.8
1,392,895	-		GFF1369	0.67	-0.9
1,392,900	-		GFF1369	0.68	+0.4
1,392,906	-		GFF1369	0.68	-1.2
1,392,939	+		GFF1369	0.71	-1.3
1,392,949	+		GFF1369	0.72	+0.0
1,392,951	+		GFF1369	0.72	+1.5
1,392,957	-		GFF1369	0.73	-2.2
1,392,959	-		GFF1369	0.73	-0.7
1,392,960	+		GFF1369	0.73	+0.4
1,392,960	+		GFF1369	0.73	+0.4
1,392,970	+		GFF1369	0.74	+0.7
1,392,978	-		GFF1369	0.74	+0.1
1,392,978	-		GFF1369	0.74	-1.9
1,392,985	+		GFF1369	0.75	+0.5
1,392,985	+		GFF1369	0.75	-0.1
1,392,985	+		GFF1369	0.75	-1.2
1,392,993	-		GFF1369	0.76	+1.6
1,392,993	-		GFF1369	0.76	+0.3
1,393,001	-		GFF1369	0.76	-0.7
1,393,001	-		GFF1369	0.76	-1.5
1,393,009	-		GFF1369	0.77	-0.6
1,393,038	+		GFF1369	0.80	+0.7
1,393,074	-		GFF1369	0.83	-0.8
1,393,077	+		GFF1369	0.83	-2.1
1,393,108	+		GFF1369	0.86	-0.2
1,393,113	+		GFF1369	0.86	-0.6
1,393,113	+		GFF1369	0.86	-1.3
1,393,116	-		GFF1369	0.86	-0.8
1,393,124	-		GFF1369	0.87	-2.3
1,393,156	+		GFF1369	0.90	-1.6
1,393,156	+		GFF1369	0.90	+0.3
1,393,163	+				-0.6
1,393,163	+				-1.0
1,393,164	-				-1.7
1,393,171	-				-0.0
1,393,171	-				-0.8
1,393,181	+				+0.1
1,393,213	-				-2.1
1,393,221	+				-1.9
1,393,257	+				-0.6
1,393,258	-				-0.3
1,393,265	-				+0.5
1,393,266	+				-1.5
1,393,273	-				+0.6
1,393,284	-				+0.3
1,393,284	-				-2.3
1,393,321	+				+0.8
1,393,329	-				+1.0
1,393,351	-				-0.6
1,393,351	-				-1.1
1,393,372	-				+0.1
1,393,383	-		GFF1370	0.10	+1.9
1,393,391	+		GFF1370	0.11	-0.3
1,393,391	+		GFF1370	0.11	-2.3
1,393,391	+		GFF1370	0.11	-0.2
1,393,391	+		GFF1370	0.11	+0.3
1,393,391	+		GFF1370	0.11	-0.3
1,393,391	+		GFF1370	0.11	+0.7
1,393,391	+		GFF1370	0.11	+0.6
1,393,391	+		GFF1370	0.11	-0.7
1,393,399	-		GFF1370	0.12	+1.1
1,393,399	-		GFF1370	0.12	+0.9
1,393,399	-		GFF1370	0.12	+1.0
1,393,420	+		GFF1370	0.14	-1.5
1,393,461	+		GFF1370	0.18	+0.3
1,393,463	+		GFF1370	0.18	-2.1
1,393,487	+		GFF1370	0.20	-1.8
1,393,495	-		GFF1370	0.21	+0.1
1,393,516	-		GFF1370	0.23	+0.6
1,393,558	-		GFF1370	0.27	-0.8
1,393,575	+		GFF1370	0.29	-1.1
1,393,575	+		GFF1370	0.29	+0.4
1,393,583	-		GFF1370	0.30	+0.8
1,393,583	-		GFF1370	0.30	+0.4
1,393,593	-		GFF1370	0.31	+0.3
1,393,607	+		GFF1370	0.32	+1.4
1,393,615	-		GFF1370	0.33	-2.0
1,393,623	+		GFF1370	0.34	-0.4
1,393,631	+		GFF1370	0.34	-0.9
1,393,639	-		GFF1370	0.35	-1.4
1,393,645	-		GFF1370	0.36	-0.8
1,393,645	-		GFF1370	0.36	-2.2
1,393,645	-		GFF1370	0.36	-0.9
1,393,649	-		GFF1370	0.36	-0.5
1,393,661	+		GFF1370	0.37	+0.9
1,393,661	-		GFF1370	0.37	-1.5
1,393,693	+		GFF1370	0.40	-1.2
1,393,725	-		GFF1370	0.44	-1.2
1,393,727	+		GFF1370	0.44	+1.4
1,393,762	-		GFF1370	0.47	+0.7
1,393,778	+		GFF1370	0.49	+0.1
1,393,791	-		GFF1370	0.50	-0.3
1,393,799	-		GFF1370	0.51	-1.1
1,393,817	+		GFF1370	0.53	-1.2
1,393,818	+		GFF1370	0.53	+1.5
1,393,818	+		GFF1370	0.53	-0.4
1,393,822	+		GFF1370	0.53	-1.9
1,393,830	-		GFF1370	0.54	+0.8
1,393,847	+		GFF1370	0.56	-0.3
1,393,849	+		GFF1370	0.56	+0.3
1,393,849	+		GFF1370	0.56	+0.4
1,393,855	-		GFF1370	0.56	-0.9
1,393,857	-		GFF1370	0.57	-1.5
1,393,857	-		GFF1370	0.57	+0.5
1,393,857	-		GFF1370	0.57	+0.2
1,393,857	-		GFF1370	0.57	-1.2
1,393,857	-		GFF1370	0.57	+0.9
1,393,889	+		GFF1370	0.60	-1.4
1,393,897	-		GFF1370	0.60	-0.8
1,393,901	+		GFF1370	0.61	-0.9
1,393,902	-		GFF1370	0.61	-0.3
1,393,902	-		GFF1370	0.61	-1.4
1,393,937	-		GFF1370	0.64	-0.4
1,393,946	-		GFF1370	0.65	-0.0
1,393,968	+		GFF1370	0.67	+0.3
1,393,993	-		GFF1370	0.70	+0.1
1,393,993	-		GFF1370	0.70	+0.1
1,394,048	-		GFF1370	0.75	-1.1
1,394,058	-		GFF1370	0.76	-2.5
1,394,071	-		GFF1370	0.78	-0.7
1,394,086	+		GFF1370	0.79	-0.4
1,394,086	+		GFF1370	0.79	+0.9
1,394,086	+		GFF1370	0.79	-0.5
1,394,091	+		GFF1370	0.80	-1.4
1,394,108	+		GFF1370	0.81	-1.7
1,394,113	+		GFF1370	0.82	-0.6
1,394,113	+		GFF1370	0.82	-0.7
1,394,115	+		GFF1370	0.82	+1.1
1,394,115	+		GFF1370	0.82	+0.6
1,394,115	+		GFF1370	0.82	-0.3
1,394,121	-		GFF1370	0.82	-0.5
1,394,121	-		GFF1370	0.82	+0.4
1,394,121	-		GFF1370	0.82	+0.1
1,394,121	-		GFF1370	0.82	+0.5
1,394,123	-		GFF1370	0.83	-0.4
1,394,161	+		GFF1370	0.86	-1.1
1,394,169	-		GFF1370	0.87	-1.0
1,394,171	+		GFF1370	0.87	-0.8
1,394,172	+		GFF1370	0.87	-0.7
1,394,172	+		GFF1370	0.87	-0.8
1,394,172	+		GFF1370	0.87	-1.1
1,394,184	-		GFF1370	0.89	-1.0
1,394,197	-		GFF1370	0.90	+1.5
1,394,202	-				-0.9
1,394,227	-				-0.3
1,394,262	-				-1.1
1,394,292	-				-0.3
1,394,297	-				-1.6
1,394,297	-				-0.3
1,394,297	-				-0.7
1,394,297	-				+0.8
1,394,297	-				+0.3
1,394,301	-				+0.4
1,394,307	-				-0.9
1,394,309	+				-0.7
1,394,320	+				+0.1
1,394,320	+				+0.4
1,394,320	+				-2.1
1,394,320	+				-0.4
1,394,320	+				-0.4
1,394,320	+				+0.1
1,394,328	-				-1.3
1,394,328	-				-0.4
1,394,328	-				+0.1
1,394,335	-				+0.6
1,394,346	+				-0.3
1,394,346	-				-0.7
1,394,368	+				+0.1
1,394,375	+				+1.7
1,394,375	+				-0.5
1,394,376	-				-1.1
1,394,376	-				-0.9
1,394,378	-				-0.9
1,394,383	-				-1.4
1,394,384	-				+0.3
1,394,392	+				+0.3
1,394,392	+				-0.4
1,394,392	+				+0.4
1,394,392	+				-0.4
1,394,392	+				-0.5
1,394,392	+				-2.3
1,394,392	+				+0.3
1,394,395	-				-0.2
1,394,397	+				+1.1
1,394,400	-				-0.5
1,394,405	-				+0.8
1,394,405	-				-0.3
1,394,405	-				-2.0
1,394,410	-				+0.9
1,394,412	-				-0.1
1,394,469	+		GFF1371	0.13	-0.2
1,394,479	+		GFF1371	0.14	-0.7
1,394,481	+		GFF1371	0.14	-0.4
1,394,481	+		GFF1371	0.14	-1.1
1,394,489	+		GFF1371	0.15	-0.7
1,394,489	-		GFF1371	0.15	+0.2
1,394,489	-		GFF1371	0.15	-1.6
1,394,523	+		GFF1371	0.18	-0.3
1,394,523	+		GFF1371	0.18	-0.9
1,394,523	+		GFF1371	0.18	-0.2
1,394,523	+		GFF1371	0.18	-0.9
1,394,523	+		GFF1371	0.18	+0.4
1,394,531	-		GFF1371	0.18	-0.1
1,394,531	-		GFF1371	0.18	+0.6
1,394,531	-		GFF1371	0.18	-0.6
1,394,531	-		GFF1371	0.18	-0.2
1,394,531	-		GFF1371	0.18	-3.3
1,394,540	+		GFF1371	0.19	-0.8
1,394,540	-		GFF1371	0.19	-0.2
1,394,573	-		GFF1371	0.22	-1.0
1,394,588	+		GFF1371	0.23	-2.3
1,394,601	-		GFF1371	0.24	+0.0
1,394,611	+		GFF1371	0.25	+0.1
1,394,612	+		GFF1371	0.25	-0.7
1,394,620	-		GFF1371	0.26	-0.1
1,394,631	-		GFF1371	0.27	-1.0
1,394,636	-		GFF1371	0.27	+1.0
1,394,636	-		GFF1371	0.27	+0.5
1,394,652	+		GFF1371	0.28	-2.1
1,394,660	-		GFF1371	0.29	-0.4
1,394,680	+		GFF1371	0.31	-0.0
1,394,688	-		GFF1371	0.31	-0.1
1,394,688	-		GFF1371	0.31	-0.3
1,394,688	-		GFF1371	0.31	-0.4
1,394,688	-		GFF1371	0.31	-0.6
1,394,688	-		GFF1371	0.31	+1.2
1,394,693	-		GFF1371	0.32	+0.3
1,394,715	-		GFF1371	0.34	+0.5
1,394,715	-		GFF1371	0.34	-3.0
1,394,736	+		GFF1371	0.35	-1.1
1,394,773	+		GFF1371	0.38	-0.5
1,394,773	+		GFF1371	0.38	-1.3
1,394,774	+		GFF1371	0.38	-1.5
1,394,778	+		GFF1371	0.39	-0.1
1,394,778	+		GFF1371	0.39	+0.1
1,394,786	-		GFF1371	0.39	+0.1
1,394,792	+		GFF1371	0.40	+0.7
1,394,793	+		GFF1371	0.40	+0.1
1,394,793	+		GFF1371	0.40	-1.1
1,394,801	-		GFF1371	0.41	+0.5
1,394,811	-		GFF1371	0.42	-1.7
1,394,843	-		GFF1371	0.44	+0.4
1,394,859	+		GFF1371	0.45	-1.7
1,394,887	+		GFF1371	0.48	+0.8
1,394,900	-		GFF1371	0.49	+0.5
1,394,900	-		GFF1371	0.49	-0.1
1,394,906	+		GFF1371	0.49	-1.3
1,394,906	+		GFF1371	0.49	+0.5
1,394,906	+		GFF1371	0.49	+0.8
1,394,906	+		GFF1371	0.49	+0.5
1,394,907	+		GFF1371	0.49	+0.6
1,394,907	+		GFF1371	0.49	+0.2
1,394,915	-		GFF1371	0.50	-0.7
1,394,915	-		GFF1371	0.50	+1.1
1,394,921	+		GFF1371	0.51	+0.2
1,394,921	+		GFF1371	0.51	-0.6
1,394,929	-		GFF1371	0.51	-0.4
1,394,929	-		GFF1371	0.51	+0.2
1,394,929	-		GFF1371	0.51	+1.3
1,394,935	+		GFF1371	0.52	+0.5
1,394,944	-		GFF1371	0.53	+0.1
1,394,951	+		GFF1371	0.53	+0.2
1,394,973	+		GFF1371	0.55	-0.3
1,394,973	+		GFF1371	0.55	-1.0
1,394,983	+		GFF1371	0.56	-0.8
1,394,983	+		GFF1371	0.56	-2.7
1,394,991	-		GFF1371	0.56	-0.1
1,395,029	-		GFF1371	0.60	-0.5
1,395,029	-		GFF1371	0.60	-0.9
1,395,044	-		GFF1371	0.61	-1.4
1,395,050	-		GFF1371	0.61	-0.3
1,395,060	+		GFF1371	0.62	+0.1
1,395,060	+		GFF1371	0.62	+0.1
1,395,068	-		GFF1371	0.63	+0.5
1,395,070	+		GFF1371	0.63	-0.7
1,395,070	+		GFF1371	0.63	+0.9
1,395,070	+		GFF1371	0.63	-0.9
1,395,070	+		GFF1371	0.63	+0.6
1,395,070	+		GFF1371	0.63	-0.5
1,395,070	+		GFF1371	0.63	-0.8
1,395,070	+		GFF1371	0.63	+0.3
1,395,070	+		GFF1371	0.63	-1.5
1,395,070	+		GFF1371	0.63	+0.1
1,395,070	+		GFF1371	0.63	+0.4
1,395,078	+		GFF1371	0.64	-0.3
1,395,078	+		GFF1371	0.64	+1.6
1,395,078	+		GFF1371	0.64	-1.0
1,395,078	+		GFF1371	0.64	-0.5
1,395,078	-		GFF1371	0.64	+1.3
1,395,078	-		GFF1371	0.64	+0.2
1,395,078	-		GFF1371	0.64	-1.2
1,395,078	-		GFF1371	0.64	-1.3
1,395,078	-		GFF1371	0.64	+0.3
1,395,078	-		GFF1371	0.64	+0.2
1,395,078	-		GFF1371	0.64	+0.2
1,395,078	-		GFF1371	0.64	+0.4
1,395,078	-		GFF1371	0.64	-1.0
1,395,078	-		GFF1371	0.64	-2.3
1,395,086	-		GFF1371	0.64	-1.0
1,395,130	-		GFF1371	0.68	-2.0
1,395,146	-		GFF1371	0.69	-0.9
1,395,160	-		GFF1371	0.70	-0.9
1,395,184	+		GFF1371	0.72	-0.7
1,395,184	+		GFF1371	0.72	+0.3
1,395,184	+		GFF1371	0.72	-1.0
1,395,192	-		GFF1371	0.73	+0.1
1,395,192	-		GFF1371	0.73	+0.5
1,395,192	-		GFF1371	0.73	-2.6
1,395,192	-		GFF1371	0.73	-0.3
1,395,228	-		GFF1371	0.76	-1.2
1,395,250	+		GFF1371	0.78	-0.2
1,395,260	-		GFF1371	0.79	-1.1
1,395,288	-		GFF1371	0.81	+0.4