Strain Fitness in Sphingobium sp. HT1-2 around GFF1803

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,824,604	+		GFF1802	0.53	-0.4
1,824,607	-		GFF1802	0.54	-0.9
1,824,619	+		GFF1802	0.55	-0.3
1,824,631	-		GFF1802	0.56	-2.5
1,824,635	+		GFF1802	0.57	+0.5
1,824,635	+		GFF1802	0.57	+0.2
1,824,639	+		GFF1802	0.57	+0.9
1,824,639	+		GFF1802	0.57	-0.6
1,824,639	+		GFF1802	0.57	-1.8
1,824,642	-		GFF1802	0.57	-1.5
1,824,647	-		GFF1802	0.58	+0.0
1,824,647	-		GFF1802	0.58	-0.6
1,824,647	-		GFF1802	0.58	-1.4
1,824,668	+		GFF1802	0.60	+0.8
1,824,676	+		GFF1802	0.61	-1.2
1,824,689	+		GFF1802	0.62	-1.3
1,824,689	+		GFF1802	0.62	-0.6
1,824,697	-		GFF1802	0.63	+0.7
1,824,697	-		GFF1802	0.63	-1.9
1,824,697	-		GFF1802	0.63	-1.3
1,824,697	-		GFF1802	0.63	+0.2
1,824,699	+		GFF1802	0.64	-0.3
1,824,699	+		GFF1802	0.64	+0.4
1,824,703	+		GFF1802	0.64	-0.1
1,824,707	-		GFF1802	0.64	+0.1
1,824,707	-		GFF1802	0.64	-0.6
1,824,707	-		GFF1802	0.64	+1.7
1,824,707	-		GFF1802	0.64	-0.7
1,824,729	+		GFF1802	0.67	-0.0
1,824,729	+		GFF1802	0.67	-1.4
1,824,737	-		GFF1802	0.68	+0.0
1,824,737	-		GFF1802	0.68	+0.0
1,824,761	+		GFF1802	0.70	-0.4
1,824,770	+		GFF1802	0.71	-0.3
1,824,798	+		GFF1802	0.74	-3.3
1,824,814	+		GFF1802	0.76	-1.2
1,824,814	+		GFF1802	0.76	+0.1
1,824,822	-		GFF1802	0.77	+0.9
1,824,822	-		GFF1802	0.77	-0.3
1,824,829	-		GFF1802	0.77	+1.3
1,824,834	+		GFF1802	0.78	-1.4
1,824,839	+		GFF1802	0.79	-1.1
1,824,845	+		GFF1802	0.79	-0.4
1,824,845	+		GFF1802	0.79	-1.5
1,824,845	+		GFF1802	0.79	-0.7
1,824,845	+		GFF1802	0.79	+0.8
1,824,845	+		GFF1802	0.79	+0.0
1,824,845	+		GFF1802	0.79	-1.2
1,824,845	+		GFF1802	0.79	-0.3
1,824,848	-		GFF1802	0.80	-0.7
1,824,853	-		GFF1802	0.80	+0.1
1,824,853	-		GFF1802	0.80	-1.1
1,824,853	-		GFF1802	0.80	+0.2
1,824,853	-		GFF1802	0.80	+0.1
1,824,853	-		GFF1802	0.80	-1.3
1,824,853	-		GFF1802	0.80	-1.1
1,824,853	-		GFF1802	0.80	+0.3
1,824,853	-		GFF1802	0.80	-2.4
1,824,853	-		GFF1802	0.80	+0.3
1,824,853	-		GFF1802	0.80	+0.7
1,824,889	-		GFF1802	0.84	-1.9
1,824,891	+		GFF1802	0.84	-0.4
1,824,914	+		GFF1802	0.87	-0.3
1,824,923	-		GFF1802	0.88	+0.7
1,824,924	+		GFF1802	0.88	-1.1
1,824,955	-				-0.4
1,824,955	-				+0.6
1,824,957	+				+0.9
1,824,962	+				-1.0
1,824,962	+				-0.3
1,824,965	-				-0.6
1,824,990	-				+0.1
1,825,027	+				+0.8
1,825,027	+				-0.7
1,825,027	+				+0.8
1,825,027	+				+0.8
1,825,027	+				-0.6
1,825,039	+				-0.7
1,825,045	-				-0.3
1,825,079	+				-0.7
1,825,084	+				-0.9
1,825,107	+				-1.3
1,825,107	+				+0.7
1,825,107	+				+0.1
1,825,115	-				-1.1
1,825,117	-				+0.4
1,825,125	+				-0.5
1,825,138	+				-0.7
1,825,146	-				+0.8
1,825,188	+				-0.3
1,825,235	+				-1.1
1,825,235	+				+0.7
1,825,240	+				+0.1
1,825,243	-				+0.9
1,825,245	+				-1.1
1,825,245	+				-0.5
1,825,245	+				+0.0
1,825,246	+				-0.5
1,825,253	-				+1.0
1,825,253	-				+0.3
1,825,254	-				+0.6
1,825,279	+				-1.6
1,825,287	-				+0.3
1,825,310	-				-0.0
1,825,320	+				-0.7
1,825,328	-				+0.3
1,825,349	+				-0.8
1,825,354	+				+1.5
1,825,354	+				-1.9
1,825,362	-				-0.4
1,825,362	-				-0.4
1,825,395	-				+0.8
1,825,419	+				+2.0
1,825,429	-				+1.1
1,825,439	+				-1.9
1,825,441	+				-0.9
1,825,449	-				-1.4
1,825,449	-				-0.0
1,825,483	+				-1.5
1,825,483	+				-1.3
1,825,483	+				-0.2
1,825,483	+				-0.9
1,825,491	-				-2.3
1,825,491	-				-1.7
1,825,491	-				-1.4
1,825,491	-				+0.3
1,825,518	-				-0.5
1,825,518	-				-0.0
1,825,520	-				-0.4
1,825,534	+				-0.6
1,825,534	+				+1.1
1,825,577	-				+0.0
1,825,619	+		GFF1803	0.14	-2.5
1,825,619	+		GFF1803	0.14	+1.2
1,825,619	+		GFF1803	0.14	-1.1
1,825,619	+		GFF1803	0.14	+1.5
1,825,619	+		GFF1803	0.14	+0.7
1,825,624	+		GFF1803	0.16	+0.4
1,825,624	+		GFF1803	0.16	+0.8
1,825,624	+		GFF1803	0.16	+0.0
1,825,624	+		GFF1803	0.16	+0.1
1,825,624	+		GFF1803	0.16	-1.0
1,825,624	+		GFF1803	0.16	+0.7
1,825,624	+		GFF1803	0.16	-0.1
1,825,624	+		GFF1803	0.16	-1.2
1,825,627	-		GFF1803	0.17	-1.3
1,825,627	-		GFF1803	0.17	-1.1
1,825,632	-		GFF1803	0.19	+0.9
1,825,654	-		GFF1803	0.26	-0.4
1,825,677	+		GFF1803	0.34	-0.1
1,825,742	+		GFF1803	0.57	-0.8
1,825,742	+		GFF1803	0.57	+1.0
1,825,742	+		GFF1803	0.57	+0.8
1,825,742	+		GFF1803	0.57	+1.1
1,825,750	-		GFF1803	0.59	-1.4
1,825,750	-		GFF1803	0.59	+1.2
1,825,750	-		GFF1803	0.59	+0.8
1,825,822	-		GFF1803	0.84	-2.2
1,825,851	+				-0.4
1,825,851	-				+1.2
1,825,856	+				-1.5
1,825,856	+				-1.9
1,825,859	-				-1.7
1,825,861	+				-1.4
1,825,869	-				+1.7
1,825,882	+				-1.4
1,825,882	+				+0.3
1,825,882	+				-0.7
1,825,896	-				-0.7
1,825,901	-				-1.0
1,825,907	+				-0.5
1,825,909	-				-1.0
1,825,912	+				-0.2
1,825,915	-				-1.7
1,825,915	-				-0.7
1,825,915	-				-1.1
1,825,945	-				-0.6
1,825,981	-				+1.1
1,825,998	-				-0.7
1,826,001	+				-1.3
1,826,012	-				-1.0
1,826,030	-				-0.9
1,826,031	+				-0.0
1,826,062	+				-0.8
1,826,070	-				+0.1
1,826,124	+				-0.0
1,826,124	+				-1.0
1,826,132	-				+1.2
1,826,145	+				+0.0
1,826,148	+				-0.6
1,826,148	-				-0.9
1,826,166	+		GFF1804	0.11	-0.6
1,826,174	-		GFF1804	0.11	-0.5
1,826,189	-		GFF1804	0.13	+0.3
1,826,203	+		GFF1804	0.14	-0.3
1,826,203	+		GFF1804	0.14	+0.6
1,826,203	+		GFF1804	0.14	-0.4
1,826,211	+		GFF1804	0.15	-3.2
1,826,211	-		GFF1804	0.15	-0.7
1,826,211	-		GFF1804	0.15	-0.7
1,826,211	-		GFF1804	0.15	-0.4
1,826,211	-		GFF1804	0.15	+0.8
1,826,241	-		GFF1804	0.17	-0.1
1,826,250	-		GFF1804	0.18	-0.3
1,826,257	+		GFF1804	0.18	-0.3
1,826,260	-		GFF1804	0.19	-1.3
1,826,285	+		GFF1804	0.21	-1.7
1,826,285	+		GFF1804	0.21	-3.0
1,826,312	+		GFF1804	0.23	+0.4
1,826,340	+		GFF1804	0.25	-0.9
1,826,343	-		GFF1804	0.25	-0.7
1,826,343	-		GFF1804	0.25	+1.6
1,826,348	-		GFF1804	0.26	-0.2
1,826,350	+		GFF1804	0.26	+1.1
1,826,350	+		GFF1804	0.26	-0.6
1,826,362	-		GFF1804	0.27	+1.3
1,826,362	-		GFF1804	0.27	-0.9
1,826,376	-		GFF1804	0.28	-0.4
1,826,383	+		GFF1804	0.29	-0.4
1,826,383	+		GFF1804	0.29	-1.7
1,826,407	+		GFF1804	0.31	-0.3
1,826,407	+		GFF1804	0.31	+0.2
1,826,415	-		GFF1804	0.31	-1.1
1,826,415	-		GFF1804	0.31	+0.7
1,826,415	-		GFF1804	0.31	-1.6
1,826,425	+		GFF1804	0.32	+0.9
1,826,458	+		GFF1804	0.35	+0.2
1,826,462	-		GFF1804	0.35	+0.1
1,826,462	-		GFF1804	0.35	-0.2
1,826,492	+		GFF1804	0.38	+0.8
1,826,520	+		GFF1804	0.40	-0.5
1,826,554	-		GFF1804	0.43	+0.3
1,826,568	+		GFF1804	0.44	-0.8
1,826,654	+		GFF1804	0.51	+1.9
1,826,654	+		GFF1804	0.51	+1.0
1,826,684	-		GFF1804	0.53	+0.7
1,826,689	-		GFF1804	0.54	-1.5
1,826,705	+		GFF1804	0.55	-0.5
1,826,709	+		GFF1804	0.55	-0.6
1,826,711	-		GFF1804	0.56	+1.0
1,826,717	-		GFF1804	0.56	-2.7
1,826,738	-		GFF1804	0.58	-0.7
1,826,738	-		GFF1804	0.58	+0.0
1,826,789	+		GFF1804	0.62	-1.4
1,826,789	+		GFF1804	0.62	+1.2
1,826,789	+		GFF1804	0.62	-0.0
1,826,806	+		GFF1804	0.63	+0.6
1,826,811	+		GFF1804	0.64	-1.2
1,826,824	-		GFF1804	0.65	+0.5
1,826,826	+		GFF1804	0.65	+0.0
1,826,832	-		GFF1804	0.66	+0.1