Strain Fitness in Sphingobium sp. HT1-2 around GFF2363

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,384,169	-		GFF2362	0.17	+0.3
2,384,170	+		GFF2362	0.17	-0.0
2,384,177	-		GFF2362	0.17	-1.4
2,384,181	-		GFF2362	0.18	+0.4
2,384,191	-		GFF2362	0.19	-1.1
2,384,203	+		GFF2362	0.20	+0.3
2,384,221	+		GFF2362	0.21	+0.9
2,384,228	+		GFF2362	0.22	-1.9
2,384,240	+		GFF2362	0.23	-0.8
2,384,240	+		GFF2362	0.23	+0.2
2,384,240	+		GFF2362	0.23	-2.0
2,384,240	+		GFF2362	0.23	+0.5
2,384,240	+		GFF2362	0.23	-0.7
2,384,243	-		GFF2362	0.23	+0.6
2,384,247	-		GFF2362	0.24	-0.4
2,384,248	-		GFF2362	0.24	+0.7
2,384,248	-		GFF2362	0.24	+0.1
2,384,248	-		GFF2362	0.24	-0.8
2,384,248	-		GFF2362	0.24	-1.9
2,384,252	+		GFF2362	0.24	+0.5
2,384,277	+		GFF2362	0.26	-0.4
2,384,277	+		GFF2362	0.26	+0.5
2,384,287	+		GFF2362	0.27	+0.5
2,384,287	+		GFF2362	0.27	-0.5
2,384,287	+		GFF2362	0.27	+0.5
2,384,287	+		GFF2362	0.27	-0.7
2,384,287	+		GFF2362	0.27	+0.4
2,384,287	+		GFF2362	0.27	-1.2
2,384,287	+		GFF2362	0.27	+0.2
2,384,287	+		GFF2362	0.27	+0.2
2,384,287	+		GFF2362	0.27	-0.8
2,384,287	+		GFF2362	0.27	-0.5
2,384,287	+		GFF2362	0.27	-0.2
2,384,287	+		GFF2362	0.27	-2.5
2,384,287	+		GFF2362	0.27	-1.5
2,384,287	+		GFF2362	0.27	+1.1
2,384,287	+		GFF2362	0.27	-0.4
2,384,287	+		GFF2362	0.27	+0.2
2,384,287	+		GFF2362	0.27	-2.3
2,384,295	-		GFF2362	0.28	-1.5
2,384,295	-		GFF2362	0.28	+0.2
2,384,295	-		GFF2362	0.28	-0.4
2,384,295	-		GFF2362	0.28	-0.9
2,384,295	-		GFF2362	0.28	-0.5
2,384,295	-		GFF2362	0.28	-0.8
2,384,295	-		GFF2362	0.28	+0.8
2,384,295	-		GFF2362	0.28	-1.7
2,384,295	-		GFF2362	0.28	-0.9
2,384,295	-		GFF2362	0.28	-2.1
2,384,295	-		GFF2362	0.28	-0.4
2,384,295	-		GFF2362	0.28	+0.5
2,384,295	-		GFF2362	0.28	+0.2
2,384,295	-		GFF2362	0.28	+0.3
2,384,300	+		GFF2362	0.28	+0.3
2,384,304	-		GFF2362	0.29	-0.8
2,384,324	+		GFF2362	0.30	+0.6
2,384,348	+		GFF2362	0.32	+0.1
2,384,359	+		GFF2362	0.33	+0.1
2,384,362	-		GFF2362	0.34	-0.7
2,384,367	-		GFF2362	0.34	-0.2
2,384,378	-		GFF2362	0.35	-0.3
2,384,380	+		GFF2362	0.35	-0.0
2,384,441	+		GFF2362	0.40	+0.2
2,384,454	-		GFF2362	0.42	-0.5
2,384,529	-		GFF2362	0.48	-1.3
2,384,550	+		GFF2362	0.50	-0.2
2,384,550	+		GFF2362	0.50	+0.1
2,384,560	+		GFF2362	0.51	+0.0
2,384,560	+		GFF2362	0.51	-0.4
2,384,568	-		GFF2362	0.52	-0.8
2,384,568	-		GFF2362	0.52	-0.4
2,384,568	-		GFF2362	0.52	-0.3
2,384,568	-		GFF2362	0.52	-0.8
2,384,568	-		GFF2362	0.52	+0.2
2,384,575	-		GFF2362	0.52	-2.4
2,384,575	-		GFF2362	0.52	+0.2
2,384,584	+		GFF2362	0.53	-0.2
2,384,587	-		GFF2362	0.53	+0.2
2,384,624	+		GFF2362	0.56	+0.8
2,384,625	+		GFF2362	0.56	+0.5
2,384,633	-		GFF2362	0.57	+0.4
2,384,638	+		GFF2362	0.58	-2.8
2,384,639	+		GFF2362	0.58	+1.3
2,384,646	+		GFF2362	0.58	+0.3
2,384,647	-		GFF2362	0.58	+0.0
2,384,647	-		GFF2362	0.58	-0.4
2,384,654	-		GFF2362	0.59	+1.0
2,384,670	+		GFF2362	0.60	-0.0
2,384,673	-		GFF2362	0.61	+0.8
2,384,684	-		GFF2362	0.62	-0.5
2,384,707	+		GFF2362	0.64	-0.5
2,384,715	-		GFF2362	0.64	-0.1
2,384,753	+		GFF2362	0.68	-0.0
2,384,756	-		GFF2362	0.68	+0.6
2,384,801	-		GFF2362	0.72	-2.5
2,384,846	+		GFF2362	0.76	-2.3
2,384,846	-		GFF2362	0.76	+0.0
2,384,852	+		GFF2362	0.76	-0.5
2,384,854	-		GFF2362	0.76	+1.8
2,384,859	-		GFF2362	0.77	+0.7
2,384,967	+		GFF2362	0.86	+0.7
2,384,967	+		GFF2362	0.86	-1.4
2,384,967	+		GFF2362	0.86	-0.4
2,384,967	+		GFF2362	0.86	+0.8
2,384,967	+		GFF2362	0.86	-1.0
2,384,967	+		GFF2362	0.86	-2.4
2,384,967	+		GFF2362	0.86	+0.1
2,384,967	+		GFF2362	0.86	+0.2
2,384,967	+		GFF2362	0.86	+1.5
2,384,968	+		GFF2362	0.86	-0.2
2,384,970	-		GFF2362	0.87	-0.3
2,384,975	-		GFF2362	0.87	+1.2
2,384,975	-		GFF2362	0.87	+0.6
2,384,975	-		GFF2362	0.87	-1.5
2,384,975	-		GFF2362	0.87	-0.3
2,384,975	-		GFF2362	0.87	-0.5
2,384,975	-		GFF2362	0.87	+0.4
2,384,975	-		GFF2362	0.87	-1.3
2,384,997	+		GFF2362	0.89	+0.5
2,385,013	-				-0.7
2,385,047	-				+0.8
2,385,052	-				+0.5
2,385,052	-				+0.9
2,385,052	-				+0.8
2,385,052	-				-0.8
2,385,067	-				+1.4
2,385,100	+				+1.0
2,385,108	-				-0.5
2,385,119	+				+0.1
2,385,119	-				-0.0
2,385,119	-				-1.0
2,385,125	-				-2.4
2,385,126	-				-1.7
2,385,127	-				-2.0
2,385,127	-				-0.1
2,385,166	+				-0.7
2,385,217	+		GFF2363	0.11	-1.0
2,385,225	-		GFF2363	0.12	+0.8
2,385,230	-		GFF2363	0.13	-2.1
2,385,295	-		GFF2363	0.23	+0.0
2,385,297	+		GFF2363	0.23	-0.3
2,385,305	-		GFF2363	0.24	-0.1
2,385,307	+		GFF2363	0.24	-1.0
2,385,307	+		GFF2363	0.24	+0.0
2,385,307	+		GFF2363	0.24	+0.6
2,385,310	-		GFF2363	0.25	-1.8
2,385,315	-		GFF2363	0.26	-0.5
2,385,320	-		GFF2363	0.26	+0.0
2,385,320	-		GFF2363	0.26	+0.3
2,385,320	-		GFF2363	0.26	-0.5
2,385,320	-		GFF2363	0.26	-0.2
2,385,322	+		GFF2363	0.27	-0.9
2,385,397	+		GFF2363	0.38	-1.2
2,385,397	+		GFF2363	0.38	-1.7
2,385,397	+		GFF2363	0.38	+0.5
2,385,397	+		GFF2363	0.38	-1.4
2,385,397	+		GFF2363	0.38	-2.0
2,385,397	+		GFF2363	0.38	+0.3
2,385,397	+		GFF2363	0.38	-1.2
2,385,397	+		GFF2363	0.38	-0.1
2,385,397	+		GFF2363	0.38	+0.0
2,385,402	+		GFF2363	0.38	-2.2
2,385,405	-		GFF2363	0.39	-0.2
2,385,405	-		GFF2363	0.39	-1.2
2,385,405	-		GFF2363	0.39	-0.5
2,385,407	+		GFF2363	0.39	-0.5
2,385,417	+		GFF2363	0.41	-1.0
2,385,422	+		GFF2363	0.41	+0.1
2,385,422	+		GFF2363	0.41	+0.9
2,385,422	+		GFF2363	0.41	-0.4
2,385,432	-		GFF2363	0.43	-0.6
2,385,442	+		GFF2363	0.44	+0.2
2,385,444	+		GFF2363	0.45	-1.3
2,385,444	+		GFF2363	0.45	-0.1
2,385,444	+		GFF2363	0.45	+1.0
2,385,452	-		GFF2363	0.46	+1.2
2,385,452	-		GFF2363	0.46	+1.2
2,385,452	-		GFF2363	0.46	-0.8
2,385,452	-		GFF2363	0.46	-0.4
2,385,452	-		GFF2363	0.46	+0.8
2,385,458	+		GFF2363	0.47	-0.8
2,385,463	+		GFF2363	0.47	+0.7
2,385,468	+		GFF2363	0.48	-0.5
2,385,468	+		GFF2363	0.48	+0.7
2,385,468	+		GFF2363	0.48	+0.9
2,385,472	+		GFF2363	0.49	-0.4
2,385,476	-		GFF2363	0.49	+0.4
2,385,477	+		GFF2363	0.49	+0.0
2,385,490	-		GFF2363	0.51	-2.2
2,385,491	+		GFF2363	0.51	-0.9
2,385,491	+		GFF2363	0.51	-0.5
2,385,491	+		GFF2363	0.51	-0.2
2,385,491	+		GFF2363	0.51	+0.8
2,385,499	-		GFF2363	0.53	-0.7
2,385,499	-		GFF2363	0.53	-0.6
2,385,499	-		GFF2363	0.53	-0.5
2,385,522	+		GFF2363	0.56	+0.3
2,385,522	+		GFF2363	0.56	-1.4
2,385,542	+		GFF2363	0.59	-0.7
2,385,547	+		GFF2363	0.60	-1.0
2,385,564	-		GFF2363	0.62	+0.5
2,385,564	-		GFF2363	0.62	-1.8
2,385,577	+		GFF2363	0.64	+0.6
2,385,577	+		GFF2363	0.64	+0.3
2,385,577	+		GFF2363	0.64	+0.6
2,385,585	-		GFF2363	0.65	-0.5
2,385,585	-		GFF2363	0.65	+0.9
2,385,585	-		GFF2363	0.65	+0.7
2,385,638	+		GFF2363	0.73	-1.2
2,385,646	-		GFF2363	0.74	+0.5
2,385,646	-		GFF2363	0.74	+1.4
2,385,646	-		GFF2363	0.74	+0.3
2,385,647	+		GFF2363	0.74	-0.5
2,385,647	+		GFF2363	0.74	-1.3
2,385,647	+		GFF2363	0.74	+0.2
2,385,654	-		GFF2363	0.76	+0.1
2,385,655	-		GFF2363	0.76	+0.7
2,385,655	-		GFF2363	0.76	-0.5
2,385,655	-		GFF2363	0.76	+0.0
2,385,655	-		GFF2363	0.76	-1.4
2,385,657	+		GFF2363	0.76	-0.3
2,385,665	-		GFF2363	0.77	-1.4
2,385,665	-		GFF2363	0.77	-2.0
2,385,667	+		GFF2363	0.77	-1.3
2,385,667	+		GFF2363	0.77	-1.4
2,385,669	+		GFF2363	0.78	-0.3
2,385,675	-		GFF2363	0.79	-0.8
2,385,675	-		GFF2363	0.79	+0.6
2,385,684	+		GFF2363	0.80	-0.2
2,385,692	+		GFF2363	0.81	-0.0
2,385,692	+		GFF2363	0.81	-2.2
2,385,692	+		GFF2363	0.81	+1.0
2,385,697	+		GFF2363	0.82	+1.0
2,385,697	+		GFF2363	0.82	-0.0
2,385,700	-		GFF2363	0.82	+0.2
2,385,700	-		GFF2363	0.82	-0.9
2,385,711	+		GFF2363	0.84	-0.6
2,385,712	+		GFF2363	0.84	+0.3
2,385,720	-		GFF2363	0.85	-1.8
2,385,727	+		GFF2363	0.86	-0.9
2,385,730	-		GFF2363	0.87	-2.1
2,385,730	-		GFF2363	0.87	-0.5
2,385,730	-		GFF2363	0.87	+0.3
2,385,730	-		GFF2363	0.87	-2.5
2,385,735	-		GFF2363	0.87	-0.7
2,385,757	+				-1.3
2,385,760	+				-2.3
2,385,767	+				-2.5
2,385,803	+				-0.6
2,385,803	+				+0.5
2,385,803	+				+0.9
2,385,803	+				-1.0
2,385,811	-				-0.5
2,385,811	-				+0.7
2,385,811	-				-0.7
2,385,813	+				+0.9
2,385,818	+				-0.0
2,385,821	-				-1.3
2,385,821	-				-0.1
2,385,852	+				+0.3
2,385,859	+				-0.6
2,385,864	-				-0.6
2,385,867	+				-0.1
2,385,869	-				+0.3
2,385,881	+				-1.7
2,385,884	-				-0.2
2,385,890	-				+0.5
2,385,929	+		GFF2364	0.12	+0.0
2,385,932	-		GFF2364	0.13	+0.8
2,385,937	-		GFF2364	0.13	+0.1
2,385,937	-		GFF2364	0.13	-0.1
2,385,966	-		GFF2364	0.17	-0.2
2,385,966	-		GFF2364	0.17	+0.5
2,385,966	-		GFF2364	0.17	+0.9
2,385,966	-		GFF2364	0.17	-0.7
2,385,966	-		GFF2364	0.17	-0.6
2,385,971	-		GFF2364	0.18	-0.1
2,385,999	+		GFF2364	0.21	+0.4
2,386,007	-		GFF2364	0.22	-0.5
2,386,008	+		GFF2364	0.22	-0.3
2,386,009	+		GFF2364	0.22	+0.3
2,386,016	-		GFF2364	0.23	-0.9
2,386,016	-		GFF2364	0.23	-2.0
2,386,017	-		GFF2364	0.23	+0.2
2,386,019	+		GFF2364	0.23	+0.3
2,386,022	+		GFF2364	0.24	+1.5
2,386,027	+		GFF2364	0.24	+0.6
2,386,029	-		GFF2364	0.25	+0.5
2,386,030	-		GFF2364	0.25	+0.7
2,386,034	-		GFF2364	0.25	-0.2
2,386,035	-		GFF2364	0.25	+1.6
2,386,043	+		GFF2364	0.26	-1.0
2,386,048	+		GFF2364	0.27	-2.5
2,386,049	-		GFF2364	0.27	-0.9
2,386,053	+		GFF2364	0.27	-1.4
2,386,053	+		GFF2364	0.27	-2.8
2,386,056	-		GFF2364	0.28	+0.0
2,386,056	-		GFF2364	0.28	-0.3
2,386,061	-		GFF2364	0.28	-1.1
2,386,071	-		GFF2364	0.30	-1.6
2,386,081	+		GFF2364	0.31	+1.3
2,386,081	+		GFF2364	0.31	-2.7
2,386,084	-		GFF2364	0.31	-0.2
2,386,103	+		GFF2364	0.33	+0.4
2,386,110	-		GFF2364	0.34	+1.1
2,386,151	+		GFF2364	0.39	-1.2
2,386,180	+		GFF2364	0.43	-2.1
2,386,181	+		GFF2364	0.43	-1.0
2,386,181	+		GFF2364	0.43	-0.4
2,386,181	+		GFF2364	0.43	-0.6
2,386,181	+		GFF2364	0.43	+0.6
2,386,188	-		GFF2364	0.44	+1.0
2,386,189	-		GFF2364	0.44	-0.7
2,386,206	+		GFF2364	0.46	-0.8
2,386,206	-		GFF2364	0.46	-0.4
2,386,239	-		GFF2364	0.50	+0.8
2,386,261	+		GFF2364	0.53	-1.1
2,386,266	+		GFF2364	0.53	+0.3
2,386,266	+		GFF2364	0.53	+0.5
2,386,266	+		GFF2364	0.53	-0.5
2,386,274	-		GFF2364	0.54	+0.0
2,386,274	-		GFF2364	0.54	+1.0
2,386,321	+		GFF2364	0.60	-1.9
2,386,321	+		GFF2364	0.60	+0.2
2,386,321	+		GFF2364	0.60	-2.5
2,386,324	-		GFF2364	0.60	+0.9
2,386,329	-		GFF2364	0.61	-0.9
2,386,329	-		GFF2364	0.61	-0.3
2,386,340	-		GFF2364	0.62	+0.9
2,386,352	+		GFF2364	0.64	-1.5
2,386,352	+		GFF2364	0.64	+0.0
2,386,352	+		GFF2364	0.64	-0.4
2,386,352	+		GFF2364	0.64	+0.4
2,386,352	+		GFF2364	0.64	+0.2
2,386,352	+		GFF2364	0.64	-1.0
2,386,360	-		GFF2364	0.64	+0.7
2,386,360	-		GFF2364	0.64	-0.0
2,386,360	-		GFF2364	0.64	-0.3
2,386,360	-		GFF2364	0.64	+0.2
2,386,360	-		GFF2364	0.64	+0.2
2,386,360	-		GFF2364	0.64	+0.0
2,386,360	-		GFF2364	0.64	-0.2
2,386,360	-		GFF2364	0.64	-0.8
2,386,360	-		GFF2364	0.64	+0.6
2,386,360	-		GFF2364	0.64	-0.8
2,386,365	-		GFF2364	0.65	-2.7
2,386,365	-		GFF2364	0.65	-1.0
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