Strain Fitness in Sphingobium sp. HT1-2 around GFF2696

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
2,717,668	+		GFF2695	0.23	-0.4
2,717,678	+		GFF2695	0.24	+0.7
2,717,686	-		GFF2695	0.24	+0.7
2,717,686	-		GFF2695	0.24	-2.0
2,717,686	-		GFF2695	0.24	+0.2
2,717,702	+		GFF2695	0.26	-0.2
2,717,704	+		GFF2695	0.26	+0.8
2,717,709	+		GFF2695	0.26	-0.6
2,717,718	-		GFF2695	0.27	-0.6
2,717,735	+		GFF2695	0.28	+0.2
2,717,736	-		GFF2695	0.28	+0.1
2,717,737	-		GFF2695	0.28	+0.2
2,717,737	-		GFF2695	0.28	-2.0
2,717,744	-		GFF2695	0.29	+0.4
2,717,744	-		GFF2695	0.29	+0.7
2,717,745	+		GFF2695	0.29	-1.2
2,717,749	+		GFF2695	0.29	-1.4
2,717,749	+		GFF2695	0.29	-2.4
2,717,780	+		GFF2695	0.32	-0.4
2,717,780	+		GFF2695	0.32	-2.0
2,717,782	+		GFF2695	0.32	-1.5
2,717,788	-		GFF2695	0.32	+0.3
2,717,788	-		GFF2695	0.32	+0.1
2,717,790	-		GFF2695	0.32	-1.3
2,717,790	-		GFF2695	0.32	-0.4
2,717,812	+		GFF2695	0.34	-0.7
2,717,822	+		GFF2695	0.35	-2.2
2,717,828	+		GFF2695	0.35	-0.8
2,717,830	+		GFF2695	0.35	+0.6
2,717,830	+		GFF2695	0.35	-0.2
2,717,838	-		GFF2695	0.36	+1.5
2,717,838	-		GFF2695	0.36	-0.0
2,717,855	-		GFF2695	0.37	-0.0
2,717,869	+		GFF2695	0.38	-0.9
2,717,871	+		GFF2695	0.39	-0.5
2,717,874	+		GFF2695	0.39	+0.5
2,717,874	+		GFF2695	0.39	-0.2
2,717,874	+		GFF2695	0.39	+0.1
2,717,882	-		GFF2695	0.39	-1.1
2,717,882	-		GFF2695	0.39	+0.8
2,717,892	+		GFF2695	0.40	+1.1
2,717,892	+		GFF2695	0.40	-0.2
2,717,894	+		GFF2695	0.40	-1.2
2,717,902	+		GFF2695	0.41	-1.9
2,717,908	+		GFF2695	0.41	+0.5
2,717,908	+		GFF2695	0.41	-1.4
2,717,916	-		GFF2695	0.42	+1.2
2,717,920	+		GFF2695	0.42	-0.0
2,717,954	+		GFF2695	0.45	+1.0
2,718,008	+		GFF2695	0.49	-0.1
2,718,008	+		GFF2695	0.49	-2.3
2,718,008	+		GFF2695	0.49	+0.2
2,718,008	+		GFF2695	0.49	+1.6
2,718,008	+		GFF2695	0.49	-0.5
2,718,013	+		GFF2695	0.50	-2.0
2,718,016	-		GFF2695	0.50	-1.2
2,718,023	+		GFF2695	0.50	-0.6
2,718,024	-		GFF2695	0.50	-0.8
2,718,043	-		GFF2695	0.52	+0.6
2,718,044	-		GFF2695	0.52	-1.9
2,718,049	+		GFF2695	0.52	-0.5
2,718,049	-		GFF2695	0.52	+0.1
2,718,049	-		GFF2695	0.52	-0.7
2,718,054	+		GFF2695	0.53	-0.4
2,718,055	+		GFF2695	0.53	+0.7
2,718,055	+		GFF2695	0.53	-2.1
2,718,055	+		GFF2695	0.53	-0.2
2,718,062	-		GFF2695	0.53	+0.5
2,718,062	-		GFF2695	0.53	+0.9
2,718,067	+		GFF2695	0.54	-3.6
2,718,074	-		GFF2695	0.54	-0.2
2,718,084	+		GFF2695	0.55	-2.2
2,718,094	+		GFF2695	0.56	-0.3
2,718,099	+		GFF2695	0.56	+0.1
2,718,099	+		GFF2695	0.56	+1.1
2,718,107	+		GFF2695	0.57	+0.5
2,718,107	-		GFF2695	0.57	+0.8
2,718,107	-		GFF2695	0.57	-0.3
2,718,107	-		GFF2695	0.57	+0.1
2,718,107	-		GFF2695	0.57	+0.5
2,718,107	-		GFF2695	0.57	-0.8
2,718,107	-		GFF2695	0.57	-2.0
2,718,148	+		GFF2695	0.60	+0.3
2,718,150	+		GFF2695	0.60	-0.2
2,718,161	+		GFF2695	0.61	+0.4
2,718,161	+		GFF2695	0.61	+0.6
2,718,161	+		GFF2695	0.61	+0.0
2,718,163	+		GFF2695	0.61	+0.2
2,718,169	-		GFF2695	0.61	+1.2
2,718,169	-		GFF2695	0.61	+0.5
2,718,169	-		GFF2695	0.61	-0.7
2,718,169	-		GFF2695	0.61	+0.9
2,718,169	-		GFF2695	0.61	-0.7
2,718,169	-		GFF2695	0.61	-1.6
2,718,177	+		GFF2695	0.62	+0.5
2,718,233	+		GFF2695	0.66	-1.0
2,718,240	+		GFF2695	0.67	+0.4
2,718,240	+		GFF2695	0.67	+1.0
2,718,271	-		GFF2695	0.69	-1.6
2,718,293	+		GFF2695	0.71	-0.2
2,718,330	-		GFF2695	0.74	-1.3
2,718,351	+		GFF2695	0.75	-0.2
2,718,351	-		GFF2695	0.75	-0.8
2,718,351	-		GFF2695	0.75	+0.1
2,718,358	+		GFF2695	0.76	-0.2
2,718,359	-		GFF2695	0.76	+0.1
2,718,359	-		GFF2695	0.76	-1.5
2,718,366	+		GFF2695	0.77	+0.9
2,718,366	+		GFF2695	0.77	-0.2
2,718,366	-		GFF2695	0.77	+0.0
2,718,367	+		GFF2695	0.77	-1.0
2,718,374	-		GFF2695	0.77	+0.4
2,718,374	-		GFF2695	0.77	+0.5
2,718,374	-		GFF2695	0.77	+0.6
2,718,374	-		GFF2695	0.77	-0.7
2,718,376	-		GFF2695	0.77	+0.1
2,718,381	+		GFF2695	0.78	-0.9
2,718,381	+		GFF2695	0.78	-0.4
2,718,381	+		GFF2695	0.78	+0.2
2,718,381	+		GFF2695	0.78	-1.7
2,718,386	+		GFF2695	0.78	-1.4
2,718,389	-		GFF2695	0.78	-0.5
2,718,389	-		GFF2695	0.78	-0.5
2,718,394	-		GFF2695	0.79	+0.7
2,718,429	-		GFF2695	0.81	+0.8
2,718,435	+		GFF2695	0.82	-0.3
2,718,437	+		GFF2695	0.82	+0.4
2,718,443	-		GFF2695	0.82	+0.5
2,718,445	-		GFF2695	0.83	-1.0
2,718,469	-		GFF2695	0.84	-0.3
2,718,476	+		GFF2695	0.85	+1.0
2,718,476	+		GFF2695	0.85	+1.6
2,718,503	-		GFF2695	0.87	+0.3
2,718,510	+		GFF2695	0.88	-1.4
2,718,510	+		GFF2695	0.88	+0.6
2,718,510	+		GFF2695	0.88	+0.7
2,718,510	+		GFF2695	0.88	+0.3
2,718,538	-		GFF2695	0.90	-1.6
2,718,551	-				+0.2
2,718,559	-				+0.7
2,718,564	+				-0.5
2,718,572	+				-1.3
2,718,579	+				-1.6
2,718,587	-				-0.6
2,718,590	+				-0.1
2,718,590	+				+0.2
2,718,598	-				+0.0
2,718,598	-				-1.9
2,718,598	-				+0.3
2,718,598	-				+0.1
2,718,610	+				-0.3
2,718,618	-				-0.6
2,718,655	+				-0.7
2,718,655	+				-0.8
2,718,655	+				-0.4
2,718,655	+				-0.9
2,718,663	-				+0.2
2,718,663	-				-1.3
2,718,690	-				-0.2
2,718,701	+				-0.3
2,718,701	+				-0.2
2,718,709	-				-1.6
2,718,709	-				-2.3
2,718,730	+				-1.0
2,718,740	+				-1.2
2,718,742	-				+0.3
2,718,767	+		GFF2696	0.10	-0.3
2,718,770	-		GFF2696	0.10	-0.6
2,718,770	-		GFF2696	0.10	+0.9
2,718,770	-		GFF2696	0.10	-1.3
2,718,775	-		GFF2696	0.11	+0.8
2,718,775	-		GFF2696	0.11	+0.6
2,718,790	-		GFF2696	0.12	-0.5
2,718,790	-		GFF2696	0.12	-1.3
2,718,803	-		GFF2696	0.14	-3.2
2,718,811	-		GFF2696	0.14	-0.2
2,718,866	+		GFF2696	0.19	-0.3
2,718,880	-		GFF2696	0.21	-0.3
2,718,885	-		GFF2696	0.21	+0.8
2,718,901	+		GFF2696	0.23	+0.4
2,718,911	+		GFF2696	0.24	-1.0
2,718,919	+		GFF2696	0.24	+0.6
2,718,919	+		GFF2696	0.24	-1.8
2,718,919	+		GFF2696	0.24	+0.3
2,718,921	+		GFF2696	0.25	-0.3
2,718,927	-		GFF2696	0.25	-1.6
2,718,928	+		GFF2696	0.25	+1.6
2,718,951	+		GFF2696	0.27	+0.9
2,718,964	+		GFF2696	0.29	+1.0
2,718,969	+		GFF2696	0.29	-0.8
2,718,969	+		GFF2696	0.29	-0.3
2,718,972	+		GFF2696	0.29	-0.7
2,718,972	-		GFF2696	0.29	+1.2
2,718,972	-		GFF2696	0.29	+0.2
2,718,977	-		GFF2696	0.30	+0.3
2,718,977	-		GFF2696	0.30	-2.2
2,718,977	-		GFF2696	0.30	-1.0
2,718,980	-		GFF2696	0.30	-0.9
2,718,980	-		GFF2696	0.30	+1.1
2,719,007	-		GFF2696	0.33	-2.0
2,719,023	+		GFF2696	0.34	-0.7
2,719,023	-		GFF2696	0.34	+0.7
2,719,028	+		GFF2696	0.35	-1.9
2,719,028	+		GFF2696	0.35	+0.3
2,719,031	-		GFF2696	0.35	-0.4
2,719,034	+		GFF2696	0.35	-0.8
2,719,036	-		GFF2696	0.35	-0.1
2,719,060	+		GFF2696	0.38	-1.2
2,719,068	-		GFF2696	0.38	+0.4
2,719,070	+		GFF2696	0.38	+0.8
2,719,105	+		GFF2696	0.42	+0.7
2,719,111	-		GFF2696	0.42	-1.0
2,719,114	+		GFF2696	0.43	-1.5
2,719,114	+		GFF2696	0.43	+0.5
2,719,114	+		GFF2696	0.43	+0.7
2,719,119	+		GFF2696	0.43	-0.4
2,719,122	-		GFF2696	0.43	+0.8
2,719,127	-		GFF2696	0.44	+0.2
2,719,127	-		GFF2696	0.44	+0.5
2,719,141	-		GFF2696	0.45	-0.5
2,719,147	+		GFF2696	0.46	-0.1
2,719,149	+		GFF2696	0.46	+0.2
2,719,167	+		GFF2696	0.48	+0.2
2,719,169	+		GFF2696	0.48	+1.1
2,719,170	-		GFF2696	0.48	-0.9
2,719,203	+		GFF2696	0.51	-0.7
2,719,231	-		GFF2696	0.54	-0.7
2,719,253	-		GFF2696	0.56	-2.8
2,719,253	-		GFF2696	0.56	-0.4
2,719,258	-		GFF2696	0.56	+0.5
2,719,258	-		GFF2696	0.56	+0.1
2,719,262	+		GFF2696	0.56	-2.2
2,719,262	+		GFF2696	0.56	+1.0
2,719,268	-		GFF2696	0.57	-0.1
2,719,270	-		GFF2696	0.57	-0.8
2,719,274	-		GFF2696	0.58	-1.7
2,719,285	+		GFF2696	0.59	-0.9
2,719,285	+		GFF2696	0.59	+0.5
2,719,285	+		GFF2696	0.59	+0.1
2,719,285	+		GFF2696	0.59	+0.0
2,719,293	-		GFF2696	0.59	-0.4
2,719,293	-		GFF2696	0.59	-1.3
2,719,293	-		GFF2696	0.59	-0.0
2,719,293	-		GFF2696	0.59	-0.9
2,719,293	-		GFF2696	0.59	+0.6
2,719,307	+		GFF2696	0.61	+0.5
2,719,307	+		GFF2696	0.61	+0.4
2,719,312	+		GFF2696	0.61	+0.5
2,719,312	+		GFF2696	0.61	+0.1
2,719,312	+		GFF2696	0.61	-1.7
2,719,320	+		GFF2696	0.62	-1.6
2,719,320	+		GFF2696	0.62	-1.5
2,719,320	+		GFF2696	0.62	-0.3
2,719,320	+		GFF2696	0.62	+1.2
2,719,320	+		GFF2696	0.62	-0.1
2,719,320	+		GFF2696	0.62	+0.1
2,719,320	+		GFF2696	0.62	+0.3
2,719,320	+		GFF2696	0.62	-0.6
2,719,320	+		GFF2696	0.62	-0.7
2,719,320	+		GFF2696	0.62	-0.0
2,719,320	+		GFF2696	0.62	-0.2
2,719,320	+		GFF2696	0.62	+0.2
2,719,320	-		GFF2696	0.62	+0.8
2,719,322	+		GFF2696	0.62	-0.5
2,719,322	+		GFF2696	0.62	-0.2
2,719,322	+		GFF2696	0.62	-1.7
2,719,326	-		GFF2696	0.62	-0.7
2,719,328	-		GFF2696	0.63	-0.1
2,719,328	-		GFF2696	0.63	+1.1
2,719,328	-		GFF2696	0.63	+0.8
2,719,328	-		GFF2696	0.63	-0.0
2,719,328	-		GFF2696	0.63	+0.7
2,719,328	-		GFF2696	0.63	+0.6
2,719,328	-		GFF2696	0.63	+1.2
2,719,328	-		GFF2696	0.63	-1.2
2,719,328	-		GFF2696	0.63	+0.2
2,719,328	-		GFF2696	0.63	-1.2
2,719,328	-		GFF2696	0.63	+0.4
2,719,328	-		GFF2696	0.63	+0.3
2,719,328	-		GFF2696	0.63	+0.2
2,719,328	-		GFF2696	0.63	-0.2
2,719,328	-		GFF2696	0.63	+0.4
2,719,328	-		GFF2696	0.63	+0.8
2,719,328	-		GFF2696	0.63	+0.8
2,719,329	+		GFF2696	0.63	+0.1
2,719,330	-		GFF2696	0.63	-0.4
2,719,330	-		GFF2696	0.63	-1.1
2,719,330	-		GFF2696	0.63	+0.8
2,719,334	+		GFF2696	0.63	-0.3
2,719,339	+		GFF2696	0.64	+0.7
2,719,347	+		GFF2696	0.64	+1.7
2,719,347	-		GFF2696	0.64	+0.5
2,719,352	+		GFF2696	0.65	-0.3
2,719,352	+		GFF2696	0.65	-1.8
2,719,355	-		GFF2696	0.65	-0.4
2,719,362	+		GFF2696	0.66	-0.6
2,719,371	-		GFF2696	0.67	+0.4
2,719,386	+		GFF2696	0.68	-0.3
2,719,436	+		GFF2696	0.73	-0.5
2,719,444	-		GFF2696	0.73	+0.9
2,719,449	+		GFF2696	0.74	-0.2
2,719,462	-		GFF2696	0.75	-0.7
2,719,485	+		GFF2696	0.77	-0.0
2,719,501	-		GFF2696	0.79	+0.3
2,719,503	-		GFF2696	0.79	+0.0
2,719,503	-		GFF2696	0.79	-0.1
2,719,508	-		GFF2696	0.79	+0.2
2,719,513	+		GFF2696	0.80	-2.0
2,719,518	+		GFF2696	0.80	+0.8
2,719,518	+		GFF2696	0.80	-1.3
2,719,518	+		GFF2696	0.80	+0.5
2,719,520	+		GFF2696	0.80	-0.3
2,719,521	-		GFF2696	0.81	+0.2
2,719,522	-		GFF2696	0.81	-0.0
2,719,532	+		GFF2696	0.82	-0.6
2,719,540	-		GFF2696	0.82	+1.0
2,719,550	-		GFF2696	0.83	-0.7
2,719,558	+		GFF2696	0.84	+0.0
2,719,558	+		GFF2696	0.84	+0.7
2,719,558	+		GFF2696	0.84	-0.9
2,719,563	+		GFF2696	0.85	-0.3
2,719,563	+		GFF2696	0.85	+1.2
2,719,563	+		GFF2696	0.85	+0.8
2,719,566	-		GFF2696	0.85	-0.5
2,719,566	-		GFF2696	0.85	+0.1
2,719,566	-		GFF2696	0.85	+0.6
2,719,571	-		GFF2696	0.85	+0.9
2,719,577	+		GFF2696	0.86	-0.3
2,719,577	+		GFF2696	0.86	-0.4
2,719,585	+		GFF2696	0.87	+0.1
2,719,587	+		GFF2696	0.87	+0.3
2,719,587	+		GFF2696	0.87	-1.4
2,719,593	-		GFF2696	0.87	-0.8
2,719,593	-		GFF2696	0.87	+0.0
2,719,595	-		GFF2696	0.87	+0.3
2,719,595	-		GFF2696	0.87	-0.3
2,719,595	-		GFF2696	0.87	-0.8
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