Strain Fitness in Sphingobium sp. HT1-2 around GFF1019

Experiment: EMM_noCarbon with Sucrose and Putrescine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Putrescine
1,018,559	-				-0.2
1,018,567	-				-1.6
1,018,579	+				-0.5
1,018,579	+				-0.2
1,018,579	+				-1.7
1,018,579	+				+0.4
1,018,587	-		GFF1018	0.11	+0.8
1,018,587	-		GFF1018	0.11	-1.1
1,018,587	-		GFF1018	0.11	+0.1
1,018,587	-		GFF1018	0.11	-1.2
1,018,598	+		GFF1018	0.12	-0.3
1,018,600	-		GFF1018	0.12	+0.0
1,018,617	-		GFF1018	0.14	+0.1
1,018,629	-		GFF1018	0.16	-1.1
1,018,629	-		GFF1018	0.16	-0.9
1,018,644	+		GFF1018	0.18	+0.8
1,018,644	+		GFF1018	0.18	+0.2
1,018,644	+		GFF1018	0.18	-1.0
1,018,644	+		GFF1018	0.18	-1.6
1,018,644	+		GFF1018	0.18	-0.7
1,018,644	+		GFF1018	0.18	+0.0
1,018,644	+		GFF1018	0.18	-0.2
1,018,644	+		GFF1018	0.18	+0.8
1,018,644	+		GFF1018	0.18	-0.8
1,018,647	-		GFF1018	0.18	-0.7
1,018,652	-		GFF1018	0.19	-0.8
1,018,652	-		GFF1018	0.19	-2.1
1,018,652	-		GFF1018	0.19	+0.1
1,018,652	-		GFF1018	0.19	-3.1
1,018,652	-		GFF1018	0.19	-2.8
1,018,657	+		GFF1018	0.19	-1.0
1,018,657	+		GFF1018	0.19	-0.1
1,018,657	+		GFF1018	0.19	+1.2
1,018,657	+		GFF1018	0.19	-1.2
1,018,657	+		GFF1018	0.19	+0.6
1,018,663	-		GFF1018	0.20	-1.3
1,018,663	-		GFF1018	0.20	-1.0
1,018,663	-		GFF1018	0.20	-1.0
1,018,670	-		GFF1018	0.21	-1.5
1,018,671	-		GFF1018	0.21	+0.7
1,018,676	-		GFF1018	0.22	-1.1
1,018,698	+		GFF1018	0.24	-1.1
1,018,705	+		GFF1018	0.25	+0.2
1,018,706	-		GFF1018	0.25	-1.2
1,018,720	+		GFF1018	0.27	+0.2
1,018,731	-		GFF1018	0.28	+0.7
1,018,731	-		GFF1018	0.28	-0.5
1,018,735	+		GFF1018	0.29	-0.7
1,018,735	+		GFF1018	0.29	+0.9
1,018,735	+		GFF1018	0.29	-0.2
1,018,743	-		GFF1018	0.30	+1.0
1,018,743	-		GFF1018	0.30	+0.8
1,018,769	+		GFF1018	0.33	-1.4
1,018,769	-		GFF1018	0.33	-0.6
1,018,775	+		GFF1018	0.34	-0.3
1,018,775	+		GFF1018	0.34	+0.5
1,018,775	+		GFF1018	0.34	-0.5
1,018,777	-		GFF1018	0.34	-1.2
1,018,777	-		GFF1018	0.34	+0.1
1,018,777	-		GFF1018	0.34	+1.5
1,018,777	-		GFF1018	0.34	+0.7
1,018,812	+		GFF1018	0.38	-0.2
1,018,839	-		GFF1018	0.41	-2.1
1,018,842	+		GFF1018	0.42	+0.3
1,018,861	+		GFF1018	0.44	+1.2
1,018,861	-		GFF1018	0.44	+0.8
1,018,888	-		GFF1018	0.47	-0.6
1,018,943	+		GFF1018	0.54	-2.2
1,018,961	-		GFF1018	0.56	-1.3
1,018,973	-		GFF1018	0.57	-1.3
1,018,981	+		GFF1018	0.58	-1.0
1,018,981	+		GFF1018	0.58	+0.2
1,018,989	-		GFF1018	0.59	+0.3
1,018,991	+		GFF1018	0.60	+0.2
1,018,992	+		GFF1018	0.60	-0.3
1,018,996	+		GFF1018	0.60	-0.2
1,018,996	+		GFF1018	0.60	+0.5
1,018,999	-		GFF1018	0.61	+0.6
1,018,999	-		GFF1018	0.61	+1.1
1,018,999	-		GFF1018	0.61	-0.3
1,019,014	-		GFF1018	0.62	-0.4
1,019,046	-		GFF1018	0.66	-2.2
1,019,082	-		GFF1018	0.71	+0.6
1,019,082	-		GFF1018	0.71	+0.3
1,019,103	-		GFF1018	0.73	-1.2
1,019,109	-		GFF1018	0.74	-1.6
1,019,110	+		GFF1018	0.74	-0.3
1,019,149	+		GFF1018	0.79	+0.0
1,019,175	+		GFF1018	0.82	+0.1
1,019,181	+		GFF1018	0.83	-0.1
1,019,183	-		GFF1018	0.83	-0.2
1,019,186	+		GFF1018	0.83	-0.6
1,019,194	-		GFF1018	0.84	-0.3
1,019,194	-		GFF1018	0.84	+0.1
1,019,194	-		GFF1018	0.84	+0.2
1,019,194	-		GFF1018	0.84	+0.1
1,019,209	-		GFF1018	0.86	-0.7
1,019,224	-		GFF1018	0.88	+0.9
1,019,231	-		GFF1018	0.89	+0.0
1,019,231	-		GFF1018	0.89	-0.0
1,019,239	-		GFF1018	0.90	-0.6
1,019,241	+		GFF1018	0.90	-1.3
1,019,241	-		GFF1018	0.90	-0.7
1,019,241	-		GFF1018	0.90	+1.0
1,019,256	+				-0.2
1,019,261	+				-2.6
1,019,261	+				+0.9
1,019,261	-				-0.2
1,019,266	+				-0.2
1,019,266	+				-0.9
1,019,269	-				-0.8
1,019,274	-				-1.6
1,019,276	+				+0.4
1,019,276	+				-0.2
1,019,279	-				-0.1
1,019,279	-				+0.4
1,019,279	-				+1.4
1,019,284	-				-1.2
1,019,284	-				-0.5
1,019,284	-				+1.5
1,019,284	-				-0.1
1,019,284	-				+0.3
1,019,284	-				-0.2
1,019,284	-				+0.3
1,019,284	-				+0.2
1,019,285	-				-1.6
1,019,285	-				-0.6
1,019,313	+				-0.6
1,019,323	+				-2.0
1,019,331	-				-1.7
1,019,344	-				-1.7
1,019,377	-				-0.3
1,019,384	+				-1.1
1,019,384	+				+0.6
1,019,387	+				-0.5
1,019,395	+				-0.9
1,019,403	-				+0.7
1,019,403	-				+0.4
1,019,403	-				+0.7
1,019,405	+				-0.6
1,019,408	-				-0.1
1,019,413	-				+0.4
1,019,423	-				+1.9
1,019,423	-				+0.5
1,019,423	-				+0.8
1,019,428	-				-0.5
1,019,428	-				+0.4
1,019,428	-				-2.6
1,019,435	+				-2.5
1,019,435	+				+0.7
1,019,435	-				+2.7
1,019,469	-				-2.1
1,019,474	-				+0.4
1,019,507	-				-0.1
1,019,509	+				-0.6
1,019,512	-				-1.6
1,019,512	-				+0.3
1,019,517	-				-0.8
1,019,541	-				-1.8
1,019,543	+				+0.2
1,019,597	+		GFF1019	0.10	+0.5
1,019,597	+		GFF1019	0.10	-0.6
1,019,600	-		GFF1019	0.11	+1.1
1,019,602	+		GFF1019	0.11	-0.5
1,019,602	+		GFF1019	0.11	+0.7
1,019,602	+		GFF1019	0.11	-0.1
1,019,605	-		GFF1019	0.11	-0.7
1,019,605	-		GFF1019	0.11	-1.5
1,019,605	-		GFF1019	0.11	-2.0
1,019,607	+		GFF1019	0.12	+0.4
1,019,610	-		GFF1019	0.12	+0.1
1,019,615	-		GFF1019	0.13	+0.3
1,019,618	+		GFF1019	0.13	-1.2
1,019,641	-		GFF1019	0.16	+1.3
1,019,650	-		GFF1019	0.17	-0.5
1,019,656	-		GFF1019	0.18	-1.4
1,019,684	-		GFF1019	0.22	-0.6
1,019,690	-		GFF1019	0.22	-1.6
1,019,707	-		GFF1019	0.25	+1.1
1,019,725	-		GFF1019	0.27	-1.0
1,019,729	+		GFF1019	0.27	-1.7
1,019,729	+		GFF1019	0.27	+0.8
1,019,734	+		GFF1019	0.28	-0.6
1,019,737	-		GFF1019	0.28	-0.2
1,019,737	-		GFF1019	0.28	+0.4
1,019,737	-		GFF1019	0.28	+1.8
1,019,761	+		GFF1019	0.32	-0.2
1,019,761	-		GFF1019	0.32	-1.3
1,019,779	-		GFF1019	0.34	+0.3
1,019,782	+		GFF1019	0.34	-2.3
1,019,783	-		GFF1019	0.35	-2.0
1,019,783	-		GFF1019	0.35	-1.1
1,019,790	-		GFF1019	0.35	-0.0
1,019,792	+		GFF1019	0.36	-0.1
1,019,797	+		GFF1019	0.36	+0.5
1,019,815	-		GFF1019	0.39	+1.1
1,019,835	+		GFF1019	0.41	+0.4
1,019,835	+		GFF1019	0.41	-2.0
1,019,835	+		GFF1019	0.41	-0.5
1,019,840	+		GFF1019	0.42	-0.6
1,019,840	+		GFF1019	0.42	-0.7
1,019,843	-		GFF1019	0.42	+0.2
1,019,843	-		GFF1019	0.42	-1.0
1,019,843	-		GFF1019	0.42	-0.5
1,019,850	+		GFF1019	0.43	-1.2
1,019,858	-		GFF1019	0.44	+1.2
1,019,858	-		GFF1019	0.44	-1.8
1,019,858	-		GFF1019	0.44	-1.6
1,019,861	+		GFF1019	0.45	+1.5
1,019,885	+		GFF1019	0.48	-1.6
1,019,885	+		GFF1019	0.48	-2.5
1,019,902	+		GFF1019	0.50	-2.0
1,019,907	+		GFF1019	0.51	+0.8
1,019,907	+		GFF1019	0.51	-1.3
1,019,908	+		GFF1019	0.51	+1.0
1,019,910	-		GFF1019	0.51	-0.2
1,019,910	-		GFF1019	0.51	+0.4
1,019,917	+		GFF1019	0.52	+0.1
1,019,970	-		GFF1019	0.59	+0.5
1,019,970	-		GFF1019	0.59	+0.8
1,019,984	+		GFF1019	0.61	-0.2
1,019,985	+		GFF1019	0.61	-0.7
1,019,990	+		GFF1019	0.62	-0.5
1,019,990	+		GFF1019	0.62	-0.9
1,019,991	+		GFF1019	0.62	-1.3
1,019,993	-		GFF1019	0.62	+1.4
1,020,025	+		GFF1019	0.66	+0.5
1,020,027	-		GFF1019	0.66	-0.2
1,020,027	-		GFF1019	0.66	+0.2
1,020,035	-		GFF1019	0.67	-1.7
1,020,071	+		GFF1019	0.72	-0.9
1,020,076	+		GFF1019	0.73	+1.4
1,020,076	+		GFF1019	0.73	-1.2
1,020,081	+		GFF1019	0.73	-0.7
1,020,081	+		GFF1019	0.73	-0.6
1,020,081	+		GFF1019	0.73	-0.7
1,020,081	+		GFF1019	0.73	+0.0
1,020,081	+		GFF1019	0.73	-2.0
1,020,081	+		GFF1019	0.73	-0.5
1,020,084	-		GFF1019	0.74	+1.3
1,020,084	-		GFF1019	0.74	+0.0
1,020,084	-		GFF1019	0.74	-1.1
1,020,084	-		GFF1019	0.74	-1.6
1,020,084	-		GFF1019	0.74	+0.4
1,020,084	-		GFF1019	0.74	-2.2
1,020,084	-		GFF1019	0.74	+1.7
1,020,084	-		GFF1019	0.74	+0.2
1,020,089	-		GFF1019	0.75	-0.1
1,020,089	-		GFF1019	0.75	-0.0
1,020,089	-		GFF1019	0.75	+0.4
1,020,089	-		GFF1019	0.75	+0.2
1,020,114	-		GFF1019	0.78	+1.4
1,020,128	-		GFF1019	0.80	-0.9
1,020,130	-		GFF1019	0.80	-2.5
1,020,155	+		GFF1019	0.83	+0.4
1,020,163	-		GFF1019	0.84	+0.5
1,020,176	+		GFF1019	0.86	-0.9
1,020,187	+		GFF1019	0.87	-1.9
1,020,245	-				+0.4
1,020,250	+				-0.1
1,020,267	+				+1.7
1,020,275	-				-0.8
1,020,282	+				+0.0
1,020,300	-				-0.8
1,020,307	-				+0.4
1,020,343	+				-0.9
1,020,390	+				-1.0
1,020,398	-				-1.1
1,020,424	+				+0.4
1,020,428	+				-1.6
1,020,433	+		GFF1020	0.10	+0.8
1,020,464	+		GFF1020	0.14	-0.1
1,020,482	-		GFF1020	0.16	+0.2
1,020,500	+		GFF1020	0.19	+0.6
1,020,505	+		GFF1020	0.19	-0.5
1,020,505	+		GFF1020	0.19	+0.6
1,020,505	+		GFF1020	0.19	-2.7
1,020,505	+		GFF1020	0.19	-1.0
1,020,510	+		GFF1020	0.20	-0.5
1,020,512	+		GFF1020	0.20	+1.2
1,020,512	+		GFF1020	0.20	+0.1
1,020,512	+		GFF1020	0.20	+1.1
1,020,513	-		GFF1020	0.20	+1.1
1,020,513	-		GFF1020	0.20	+0.4
1,020,513	-		GFF1020	0.20	-1.3
1,020,518	-		GFF1020	0.21	-1.1
1,020,518	-		GFF1020	0.21	-2.2
1,020,520	-		GFF1020	0.21	+0.1
1,020,520	-		GFF1020	0.21	-1.6
1,020,520	-		GFF1020	0.21	+0.2
1,020,520	-		GFF1020	0.21	-1.8
1,020,530	+		GFF1020	0.22	-0.2
1,020,532	+		GFF1020	0.23	-0.6
1,020,532	-		GFF1020	0.23	-1.1
1,020,538	-		GFF1020	0.23	+0.3
1,020,567	+		GFF1020	0.27	-0.9
1,020,576	-		GFF1020	0.28	+0.2
1,020,586	+		GFF1020	0.29	-2.2
1,020,599	-		GFF1020	0.31	+0.6
1,020,601	+		GFF1020	0.31	-0.5
1,020,601	+		GFF1020	0.31	+0.4
1,020,629	+		GFF1020	0.35	-0.3
1,020,634	+		GFF1020	0.35	-1.4
1,020,634	+		GFF1020	0.35	-0.3
1,020,636	+		GFF1020	0.36	-1.5
1,020,639	+		GFF1020	0.36	-1.6
1,020,642	-		GFF1020	0.36	-1.5
1,020,642	-		GFF1020	0.36	-1.1
1,020,642	-		GFF1020	0.36	-0.6
1,020,642	-		GFF1020	0.36	-1.1
1,020,642	-		GFF1020	0.36	-0.8
1,020,652	-		GFF1020	0.38	-0.2
1,020,681	+		GFF1020	0.41	+0.1
1,020,701	-		GFF1020	0.44	-1.5
1,020,715	+		GFF1020	0.45	-0.6
1,020,718	+		GFF1020	0.46	-0.6
1,020,737	-		GFF1020	0.48	+0.2
1,020,739	-		GFF1020	0.48	+1.4
1,020,771	-		GFF1020	0.52	+0.9
1,020,794	-		GFF1020	0.55	-0.6
1,020,799	-		GFF1020	0.56	+1.3
1,020,812	-		GFF1020	0.57	-1.3
1,020,874	-		GFF1020	0.65	+0.9
1,020,907	-		GFF1020	0.69	-1.0
1,020,923	+		GFF1020	0.71	+0.5
1,020,931	-		GFF1020	0.72	+0.9
1,020,932	+		GFF1020	0.72	-0.3
1,020,932	+		GFF1020	0.72	-2.3
1,020,932	+		GFF1020	0.72	+0.5
1,020,935	-		GFF1020	0.73	+0.0
1,020,939	+		GFF1020	0.73	+0.9
1,020,939	+		GFF1020	0.73	-0.2
1,020,947	-		GFF1020	0.74	+1.0
1,020,966	+		GFF1020	0.76	-0.1
1,020,972	-		GFF1020	0.77	-0.7
1,021,017	-		GFF1020	0.83	+1.5
1,021,057	+		GFF1020	0.88	+0.2
1,021,057	+		GFF1020	0.88	+0.8
1,021,066	+		GFF1020	0.89	+0.8
1,021,066	+		GFF1020	0.89	+0.2
1,021,066	+		GFF1020	0.89	-0.0
1,021,066	+		GFF1020	0.89	+2.0
1,021,066	+		GFF1020	0.89	-0.2
1,021,066	+		GFF1020	0.89	+0.0
1,021,067	+		GFF1020	0.89	+0.4
1,021,075	-				+0.7
1,021,086	+				+1.1
1,021,093	+				-0.9
1,021,101	-				+0.3
1,021,116	+				-0.8
1,021,119	-				-0.5
1,021,134	+				+0.5
1,021,137	-				-1.5
1,021,159	+				+0.2
1,021,167	-				-1.0
1,021,167	-				+0.7
1,021,181	+				+0.7
1,021,184	-				-1.0
1,021,184	-				+1.1
1,021,184	-				-2.1
1,021,186	+				-0.2
1,021,186	+				-1.0
1,021,186	+				-2.0
1,021,186	-				-2.9
1,021,186	-				-0.2
1,021,194	-				-0.2
1,021,212	-				-1.4
1,021,229	+				-1.3
1,021,237	+				+0.6
1,021,237	+				-1.0
1,021,237	+				+1.0
1,021,237	+				-0.5
1,021,238	-				-2.0
1,021,238	-				-1.1
1,021,238	-				+0.6
1,021,247	+				-2.0
1,021,258	-		GFF1021	0.11	+0.8
1,021,280	+		GFF1021	0.13	+0.4