Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06288

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
48,098	-		MPMX19_06287	0.61	+0.1
48,665	-				+0.1
48,665	-				-1.7
48,665	-				-0.7
48,665	-				-1.2
48,665	-				-0.4
48,665	-				-0.9
48,665	-				+0.2
48,665	-				+0.2
48,665	-				+0.1
48,665	-				-0.4
48,665	-				+0.1
48,665	-				+1.3
48,808	+				+1.3
48,917	+				+0.8
48,918	-				-0.6
48,918	-				+0.0
49,035	+				+0.7
49,036	-				+0.1
49,068	-				+1.5
49,068	-				-0.3
49,068	-				+1.8
49,068	-				-0.3
49,073	+				-0.5
49,073	+				-1.3
49,073	+				-0.5
49,073	+				-1.4
49,073	+				-1.4
49,073	+				-0.5
49,074	-				-0.8
49,074	-				-0.1
49,074	-				-2.7
49,074	-				+0.9
49,074	-				-1.4
49,074	-				-0.7
49,074	-				-0.9
49,490	-		MPMX19_06288	0.15	-1.5
49,937	-		MPMX19_06288	0.33	-0.9
50,388	-		MPMX19_06288	0.51	+1.3
50,388	-		MPMX19_06288	0.51	-0.6
50,388	-		MPMX19_06288	0.51	-1.1
50,395	-		MPMX19_06288	0.51	-0.6
50,395	-		MPMX19_06288	0.51	-0.4
50,395	-		MPMX19_06288	0.51	+0.3
50,841	+		MPMX19_06288	0.69	-1.2
50,841	+		MPMX19_06288	0.69	+0.2
50,841	+		MPMX19_06288	0.69	+0.1
50,841	+		MPMX19_06288	0.69	-0.2
50,841	+		MPMX19_06288	0.69	-0.2
50,841	+		MPMX19_06288	0.69	-0.7
50,952	-		MPMX19_06288	0.73	-0.2
51,165	+		MPMX19_06288	0.81	-0.5
51,165	+		MPMX19_06288	0.81	-0.5
51,310	-		MPMX19_06288	0.87	-1.7
51,310	-		MPMX19_06288	0.87	-1.5
51,310	-		MPMX19_06288	0.87	-1.3
51,310	-		MPMX19_06288	0.87	-0.9
51,310	-		MPMX19_06288	0.87	-0.7
51,310	-		MPMX19_06288	0.87	-0.4
51,310	-		MPMX19_06288	0.87	-0.9
51,449	-				+2.3
51,449	-				+0.2
51,549	+				+0.1
51,549	+				-0.3
51,549	+				+0.7
51,549	+				-1.5
51,549	+				-1.1
51,549	+				+0.5
51,549	+				-1.9
51,550	-				-0.9
51,550	-				+0.9
51,550	-				-0.8
51,550	-				+0.8
51,550	-				-1.5
51,550	-				+0.9
51,550	-				+0.5
51,550	-				-0.4
51,550	-				+0.3
51,550	-				-1.2
51,550	-				+1.4
51,550	-				-0.0
51,579	+				-0.2
51,580	-				-0.4
51,580	-				-0.3
51,580	-				-1.7
51,580	-				-1.1
51,580	-				+0.6
51,580	-				-1.3
51,580	-				-0.3
51,580	-				-1.2
51,580	-				-0.1
51,622	-				+0.6
51,622	-				-1.5
51,622	-				-1.5
51,818	-				+0.2
51,843	-				-0.1
51,843	-				-1.0
52,046	+				-0.6
52,046	+				+0.3
52,047	-				-0.4
52,047	-				-0.4
52,047	-				-1.7
52,048	+				-0.9
52,049	-				-0.3
52,061	+				-0.8
52,061	+				-1.0
52,062	-				-1.7
52,074	-				-0.5
52,109	+				-1.1
52,110	-				-2.3
52,110	-				-1.9
52,110	-				+0.8
52,146	+				-0.6
52,146	+				-1.9
52,146	+				-0.8
52,147	-				-0.8
52,251	-		MPMX19_06289	0.19	+1.1
52,495	-		MPMX19_06289	0.85	+0.3
52,520	+				+0.5
52,520	+				+0.5
52,520	+				-1.9
52,520	+				+0.2
52,520	+				-2.7
52,521	-				+0.1
52,521	-				-1.0
52,521	-				+0.3
52,521	-				-0.1
52,521	-				-0.1
52,521	-				-0.4
52,521	-				+0.1
52,521	-				-0.3
52,521	-				-0.1
52,628	+				-1.8