Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05879

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
7,895	+		MPMX19_05877	0.88	-0.5
7,895	+		MPMX19_05877	0.88	-0.1
7,895	+		MPMX19_05877	0.88	-2.5
7,895	+		MPMX19_05877	0.88	+0.1
7,895	+		MPMX19_05877	0.88	-0.7
7,895	+		MPMX19_05877	0.88	-0.9
7,895	+		MPMX19_05877	0.88	-0.1
7,896	-		MPMX19_05877	0.88	+0.5
7,896	-		MPMX19_05877	0.88	+1.4
8,025	+				+1.6
8,025	+				-0.1
8,025	+				-0.7
8,025	+				-2.6
8,025	+				-0.9
8,025	+				+0.4
8,025	+				-0.8
8,025	+				-0.5
8,025	+				-2.2
8,026	-				-0.3
8,026	-				-1.3
8,026	-				+0.3
8,208	+		MPMX19_05878	0.23	+0.5
8,208	+		MPMX19_05878	0.23	+0.6
8,208	+		MPMX19_05878	0.23	-0.7
8,208	+		MPMX19_05878	0.23	+0.8
8,208	+		MPMX19_05878	0.23	-1.2
8,209	-		MPMX19_05878	0.23	+0.3
8,209	-		MPMX19_05878	0.23	+0.5
8,209	-		MPMX19_05878	0.23	-1.3
8,209	-		MPMX19_05878	0.23	+0.3
8,472	+		MPMX19_05878	0.55	-1.1
8,472	+		MPMX19_05878	0.55	-1.3
8,472	+		MPMX19_05878	0.55	-0.2
8,473	-		MPMX19_05878	0.55	+1.0
8,473	-		MPMX19_05878	0.55	-0.1
8,473	-		MPMX19_05878	0.55	+0.9
8,473	-		MPMX19_05878	0.55	-0.6
8,473	-		MPMX19_05878	0.55	-0.5
8,560	-		MPMX19_05878	0.66	-1.6
8,560	-		MPMX19_05878	0.66	-2.2
8,646	+		MPMX19_05878	0.77	-0.2
8,646	+		MPMX19_05878	0.77	-0.5
8,646	+		MPMX19_05878	0.77	-3.3
8,646	+		MPMX19_05878	0.77	+0.5
8,646	+		MPMX19_05878	0.77	+0.1
8,646	+		MPMX19_05878	0.77	+0.9
8,646	+		MPMX19_05878	0.77	-0.5
8,647	-		MPMX19_05878	0.77	-1.1
8,647	-		MPMX19_05878	0.77	-0.1
8,647	-		MPMX19_05878	0.77	+0.2
8,647	-		MPMX19_05878	0.77	-0.8
8,647	-		MPMX19_05878	0.77	-1.1
8,647	-		MPMX19_05878	0.77	-0.9
8,870	+				-0.0
8,870	+				-0.9
8,871	-				-0.0
8,871	-				+0.4
8,885	+				-1.0
8,885	+				-0.5
8,886	-				+0.2
8,957	+		MPMX19_05879	0.11	-0.9
8,957	+		MPMX19_05879	0.11	-1.2
8,957	+		MPMX19_05879	0.11	-0.7
8,957	+		MPMX19_05879	0.11	-0.4
8,957	+		MPMX19_05879	0.11	+0.5
8,957	+		MPMX19_05879	0.11	-0.6
8,958	-		MPMX19_05879	0.11	-1.2
8,958	-		MPMX19_05879	0.11	-0.1
9,089	+		MPMX19_05879	0.31	-2.8
9,089	+		MPMX19_05879	0.31	-0.9
9,089	+		MPMX19_05879	0.31	-1.3
9,090	-		MPMX19_05879	0.31	-0.3
9,140	+		MPMX19_05879	0.39	-0.2
9,140	+		MPMX19_05879	0.39	-0.9
9,140	+		MPMX19_05879	0.39	-0.3
9,140	+		MPMX19_05879	0.39	-1.7
9,141	-		MPMX19_05879	0.39	+1.1
9,141	-		MPMX19_05879	0.39	-0.7
9,141	-		MPMX19_05879	0.39	-1.9
9,141	-		MPMX19_05879	0.39	-0.4
9,141	-		MPMX19_05879	0.39	+0.5
9,158	+		MPMX19_05879	0.42	+0.5
9,158	+		MPMX19_05879	0.42	-0.5
9,371	+		MPMX19_05879	0.74	+0.3
9,371	+		MPMX19_05879	0.74	-1.5
9,372	-		MPMX19_05879	0.75	-3.2
9,519	-				-0.6
9,571	-				-0.1
9,588	+				-0.7
9,588	+				-0.9
9,588	+				+0.1
9,588	+				-0.7
9,589	-				-1.2
9,589	-				-0.5
9,589	-				-0.8
9,633	+		MPMX19_05880	0.12	+0.1
9,633	+		MPMX19_05880	0.12	+0.1
9,633	+		MPMX19_05880	0.12	-0.1
9,633	+		MPMX19_05880	0.12	-0.3
9,633	+		MPMX19_05880	0.12	-2.4
9,634	-		MPMX19_05880	0.12	+0.5
9,634	-		MPMX19_05880	0.12	-0.8
9,634	-		MPMX19_05880	0.12	+0.1
9,634	-		MPMX19_05880	0.12	-2.2
9,654	+		MPMX19_05880	0.15	-0.8
9,654	+		MPMX19_05880	0.15	-1.1
9,654	+		MPMX19_05880	0.15	-0.5
9,654	+		MPMX19_05880	0.15	-0.5
9,655	-		MPMX19_05880	0.15	-0.3
9,783	+		MPMX19_05880	0.34	-0.6
9,783	+		MPMX19_05880	0.34	-0.2
9,816	+		MPMX19_05880	0.39	-0.4
9,816	+		MPMX19_05880	0.39	-0.9
9,816	+		MPMX19_05880	0.39	-1.4
9,816	+		MPMX19_05880	0.39	-0.1
9,816	+		MPMX19_05880	0.39	-0.9
9,816	+		MPMX19_05880	0.39	-0.9
9,816	+		MPMX19_05880	0.39	+0.4
9,816	+		MPMX19_05880	0.39	-1.5
9,817	-		MPMX19_05880	0.39	+0.6
9,817	-		MPMX19_05880	0.39	+0.3
9,817	-		MPMX19_05880	0.39	-1.1
9,915	+		MPMX19_05880	0.54	-0.9
9,915	+		MPMX19_05880	0.54	+1.4
9,915	+		MPMX19_05880	0.54	-0.5
9,915	+		MPMX19_05880	0.54	-1.0
9,916	-		MPMX19_05880	0.54	-2.5
10,047	+		MPMX19_05880	0.73	+0.3
10,047	+		MPMX19_05880	0.73	+1.9
10,047	+		MPMX19_05880	0.73	-0.4
10,047	+		MPMX19_05880	0.73	+0.3
10,047	+		MPMX19_05880	0.73	+1.1
10,047	+		MPMX19_05880	0.73	-1.8
10,047	+		MPMX19_05880	0.73	-1.1
10,047	+		MPMX19_05880	0.73	-1.5
10,048	-		MPMX19_05880	0.74	+0.5
10,048	-		MPMX19_05880	0.74	-1.5
10,048	-		MPMX19_05880	0.74	+0.5
10,048	-		MPMX19_05880	0.74	-0.4
10,048	-		MPMX19_05880	0.74	+0.1
10,048	-		MPMX19_05880	0.74	+0.1
10,179	+				+0.1
10,179	+				+0.5
10,180	-				-0.7
10,180	-				-0.5
10,180	-				+1.6
10,180	-				+0.3
10,218	+				-1.1
10,218	+				+1.6
10,218	+				-0.0
10,218	+				-0.3
10,219	-				+1.4