Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01589

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,662,489	+				+0.3
1,662,489	+				+0.9
1,662,489	+				-0.1
1,662,489	+				-1.7
1,662,489	+				-1.3
1,662,489	+				-0.5
1,662,489	+				-1.3
1,662,490	-				-0.9
1,662,490	-				+0.9
1,662,490	-				+0.6
1,662,490	-				+0.4
1,662,490	-				-0.4
1,662,490	-				-1.6
1,662,555	+		MPMX19_01588	0.16	+1.2
1,662,555	+		MPMX19_01588	0.16	+0.2
1,662,555	+		MPMX19_01588	0.16	-1.4
1,662,556	-		MPMX19_01588	0.16	-0.8
1,662,556	-		MPMX19_01588	0.16	+0.5
1,662,556	-		MPMX19_01588	0.16	-0.7
1,662,556	-		MPMX19_01588	0.16	+0.7
1,662,633	+		MPMX19_01588	0.28	+0.6
1,662,633	+		MPMX19_01588	0.28	-1.3
1,662,633	+		MPMX19_01588	0.28	-0.7
1,662,633	+		MPMX19_01588	0.28	-0.3
1,662,633	+		MPMX19_01588	0.28	-0.3
1,662,633	+		MPMX19_01588	0.28	+0.0
1,662,633	+		MPMX19_01588	0.28	+0.1
1,662,634	-		MPMX19_01588	0.29	-1.4
1,662,634	-		MPMX19_01588	0.29	+0.7
1,662,634	-		MPMX19_01588	0.29	-0.5
1,662,634	-		MPMX19_01588	0.29	-0.3
1,662,634	-		MPMX19_01588	0.29	-0.9
1,662,738	+		MPMX19_01588	0.46	+0.0
1,662,738	+		MPMX19_01588	0.46	-1.0
1,662,738	+		MPMX19_01588	0.46	-0.1
1,662,738	+		MPMX19_01588	0.46	-1.5
1,662,738	+		MPMX19_01588	0.46	-0.1
1,662,738	+		MPMX19_01588	0.46	-0.6
1,662,738	+		MPMX19_01588	0.46	-0.1
1,662,738	+		MPMX19_01588	0.46	+0.2
1,662,738	+		MPMX19_01588	0.46	+0.3
1,662,738	+		MPMX19_01588	0.46	+0.8
1,662,738	+		MPMX19_01588	0.46	+0.0
1,662,738	+		MPMX19_01588	0.46	-1.0
1,662,739	-		MPMX19_01588	0.46	-0.3
1,662,739	-		MPMX19_01588	0.46	-0.7
1,662,739	-		MPMX19_01588	0.46	+0.1
1,662,739	-		MPMX19_01588	0.46	+0.2
1,662,739	-		MPMX19_01588	0.46	-1.3
1,662,739	-		MPMX19_01588	0.46	-0.6
1,662,739	-		MPMX19_01588	0.46	-0.3
1,662,739	-		MPMX19_01588	0.46	-0.7
1,662,739	-		MPMX19_01588	0.46	+1.5
1,662,739	-		MPMX19_01588	0.46	-2.9
1,662,739	-		MPMX19_01588	0.46	-0.2
1,662,739	-		MPMX19_01588	0.46	-0.9
1,662,771	+		MPMX19_01588	0.51	+0.7
1,662,771	+		MPMX19_01588	0.51	-0.6
1,662,771	+		MPMX19_01588	0.51	-1.3
1,662,771	+		MPMX19_01588	0.51	-0.8
1,662,771	+		MPMX19_01588	0.51	-0.4
1,662,771	+		MPMX19_01588	0.51	-1.4
1,662,771	+		MPMX19_01588	0.51	+0.4
1,662,771	+		MPMX19_01588	0.51	-1.4
1,662,771	+		MPMX19_01588	0.51	+0.1
1,662,771	+		MPMX19_01588	0.51	-1.0
1,662,771	+		MPMX19_01588	0.51	-0.8
1,662,772	-		MPMX19_01588	0.51	+0.4
1,662,772	-		MPMX19_01588	0.51	-0.8
1,662,772	-		MPMX19_01588	0.51	-1.6
1,662,772	-		MPMX19_01588	0.51	-1.8
1,662,772	-		MPMX19_01588	0.51	-1.7
1,662,772	-		MPMX19_01588	0.51	-1.1
1,662,772	-		MPMX19_01588	0.51	-1.1
1,662,916	-		MPMX19_01588	0.75	-1.1
1,663,138	+				+0.2
1,663,138	+				+0.5
1,663,138	+				-2.0
1,663,138	+				-0.6
1,663,138	+				+0.5
1,663,138	+				-0.3
1,663,138	+				-1.4
1,663,138	+				-2.3
1,663,138	+				+0.5
1,663,138	+				-0.1
1,663,138	+				-1.1
1,663,138	+				+0.5
1,663,138	+				-0.4
1,663,138	+				-1.6
1,663,138	+				-0.3
1,663,138	+				-0.4
1,663,138	+				-0.5
1,663,139	-				-0.5
1,663,139	-				+0.0
1,663,139	-				-0.5
1,663,139	-				-0.8
1,663,139	-				+0.2
1,663,139	-				-0.3
1,663,139	-				+0.7
1,663,139	-				+0.4
1,663,139	-				-1.3
1,663,139	-				-0.1
1,663,139	-				-2.0
1,663,139	-				-0.7
1,663,161	+				-0.6
1,663,161	+				-1.8
1,663,161	+				-0.7
1,663,161	+				-0.3
1,663,161	+				+0.7
1,663,161	+				-0.5
1,663,161	+				-1.6
1,663,161	+				-2.0
1,663,161	+				-1.0
1,663,161	+				+0.2
1,663,161	+				-1.2
1,663,161	+				+0.2
1,663,161	+				+0.3
1,663,161	+				-0.6
1,663,162	-				-2.1
1,663,162	-				+0.7
1,663,162	-				-0.8
1,663,162	-				-1.4
1,663,162	-				-0.1
1,663,162	-				-1.3
1,663,162	-				+0.2
1,663,162	-				-0.4
1,663,162	-				-1.1
1,663,162	-				-0.4
1,663,162	-				-1.4
1,663,163	+				-2.2
1,663,163	+				+0.9
1,663,164	-				-0.2
1,663,164	-				-1.3
1,664,418	+				-2.3
1,664,418	+				+0.3
1,664,419	-				-1.4
1,664,419	-				-1.3
1,664,545	-		MPMX19_01590	0.19	-0.7
1,664,545	-		MPMX19_01590	0.19	+0.7
1,664,545	-		MPMX19_01590	0.19	+2.3
1,664,571	+		MPMX19_01590	0.22	+0.6
1,664,571	+		MPMX19_01590	0.22	-2.0
1,664,799	+		MPMX19_01590	0.52	-1.6
1,664,799	+		MPMX19_01590	0.52	-1.8
1,664,799	+		MPMX19_01590	0.52	-0.3
1,664,799	+		MPMX19_01590	0.52	-0.4
1,664,799	+		MPMX19_01590	0.52	+3.3
1,664,799	+		MPMX19_01590	0.52	-0.5
1,664,799	+		MPMX19_01590	0.52	-0.1
1,664,799	+		MPMX19_01590	0.52	-0.7
1,664,799	+		MPMX19_01590	0.52	-0.3
1,664,799	+		MPMX19_01590	0.52	-0.1
1,664,799	+		MPMX19_01590	0.52	-0.7
1,664,799	+		MPMX19_01590	0.52	-0.7
1,664,799	+		MPMX19_01590	0.52	-1.1
1,664,799	+		MPMX19_01590	0.52	+0.1
1,664,799	+		MPMX19_01590	0.52	-0.5
1,664,799	+		MPMX19_01590	0.52	+0.1
1,664,799	+		MPMX19_01590	0.52	-1.3
1,664,799	+		MPMX19_01590	0.52	-0.8
1,664,800	-		MPMX19_01590	0.52	+0.8
1,664,800	-		MPMX19_01590	0.52	+0.4
1,664,800	-		MPMX19_01590	0.52	-1.1
1,664,800	-		MPMX19_01590	0.52	-1.0
1,664,800	-		MPMX19_01590	0.52	+0.4
1,664,800	-		MPMX19_01590	0.52	-0.3
1,664,800	-		MPMX19_01590	0.52	+0.2
1,664,800	-		MPMX19_01590	0.52	-0.6
1,664,800	-		MPMX19_01590	0.52	+0.7
1,664,800	-		MPMX19_01590	0.52	-0.6
1,664,800	-		MPMX19_01590	0.52	+1.1
1,664,800	-		MPMX19_01590	0.52	+0.2
1,664,800	-		MPMX19_01590	0.52	-0.7
1,664,800	-		MPMX19_01590	0.52	-0.7
1,664,800	-		MPMX19_01590	0.52	-2.3
1,664,800	-		MPMX19_01590	0.52	-1.0
1,665,027	+		MPMX19_01590	0.82	-0.2
1,665,028	-		MPMX19_01590	0.82	-0.3
1,665,028	-		MPMX19_01590	0.82	-0.3
1,665,214	+				-0.1
1,665,214	+				+0.5
1,665,215	-				+1.4