Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01246

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,294,043	+		MPMX19_01244	0.54	-1.3
1,294,043	+		MPMX19_01244	0.54	-0.3
1,294,043	+		MPMX19_01244	0.54	+1.0
1,294,043	+		MPMX19_01244	0.54	-1.5
1,294,043	+		MPMX19_01244	0.54	-1.2
1,294,043	+		MPMX19_01244	0.54	+0.3
1,294,043	+		MPMX19_01244	0.54	-0.6
1,294,044	-		MPMX19_01244	0.54	-1.5
1,294,044	-		MPMX19_01244	0.54	+0.7
1,294,044	-		MPMX19_01244	0.54	+0.5
1,294,044	-		MPMX19_01244	0.54	-0.5
1,294,044	-		MPMX19_01244	0.54	-1.4
1,294,260	+				-0.3
1,294,260	+				-0.6
1,294,260	+				-0.9
1,294,261	-				-0.5
1,294,261	-				+0.5
1,294,261	-				-0.4
1,294,281	+				-0.7
1,294,290	+				-1.1
1,294,290	+				-1.1
1,294,290	+				+0.1
1,294,290	+				-2.3
1,294,290	+				+1.5
1,294,290	+				-1.5
1,294,290	+				-0.2
1,294,290	+				+0.1
1,294,290	+				-0.6
1,294,290	+				-1.1
1,294,290	+				+0.9
1,294,290	+				-1.2
1,294,290	+				-1.1
1,294,290	+				-0.7
1,294,290	+				+0.3
1,294,290	+				+0.3
1,294,290	+				+0.5
1,294,290	+				-0.2
1,294,290	+				-0.1
1,294,290	+				-0.9
1,294,291	-				-0.8
1,294,291	-				-0.5
1,294,291	-				-0.8
1,294,291	-				+1.2
1,294,291	-				-0.9
1,294,291	-				+1.1
1,294,291	-				+0.9
1,294,291	-				-0.0
1,294,291	-				-1.6
1,294,291	-				-1.8
1,294,291	-				-0.3
1,294,291	-				+0.7
1,294,291	-				+0.7
1,294,291	-				-1.0
1,294,291	-				-0.3
1,294,291	-				-1.1
1,294,291	-				+1.1
1,294,291	-				-1.1
1,294,291	-				-0.8
1,294,291	-				+1.1
1,294,291	-				-2.1
1,294,291	-				+0.7
1,294,291	-				+0.4
1,294,309	+		MPMX19_01245	0.11	+0.2
1,294,309	+		MPMX19_01245	0.11	-1.1
1,294,309	+		MPMX19_01245	0.11	-0.9
1,294,309	+		MPMX19_01245	0.11	-1.9
1,294,309	+		MPMX19_01245	0.11	-0.9
1,294,309	+		MPMX19_01245	0.11	+0.6
1,294,309	+		MPMX19_01245	0.11	-0.1
1,294,309	+		MPMX19_01245	0.11	-0.7
1,294,309	+		MPMX19_01245	0.11	-0.1
1,294,309	+		MPMX19_01245	0.11	+0.0
1,294,309	+		MPMX19_01245	0.11	+0.4
1,294,309	+		MPMX19_01245	0.11	-0.2
1,294,309	+		MPMX19_01245	0.11	+1.4
1,294,309	+		MPMX19_01245	0.11	-0.7
1,294,310	-		MPMX19_01245	0.11	-0.2
1,294,310	-		MPMX19_01245	0.11	-0.6
1,294,310	-		MPMX19_01245	0.11	-0.5
1,294,310	-		MPMX19_01245	0.11	-1.1
1,294,310	-		MPMX19_01245	0.11	-0.4
1,294,310	-		MPMX19_01245	0.11	+0.2
1,294,310	-		MPMX19_01245	0.11	+0.5
1,294,310	-		MPMX19_01245	0.11	-0.9
1,294,310	-		MPMX19_01245	0.11	-0.3
1,294,310	-		MPMX19_01245	0.11	+0.3
1,294,310	-		MPMX19_01245	0.11	-0.5
1,294,310	-		MPMX19_01245	0.11	-1.3
1,294,310	-		MPMX19_01245	0.11	+0.1
1,294,310	-		MPMX19_01245	0.11	-0.4
1,294,333	+		MPMX19_01245	0.14	-0.0
1,294,333	+		MPMX19_01245	0.14	+0.7
1,294,333	+		MPMX19_01245	0.14	-0.3
1,294,335	+		MPMX19_01245	0.14	+0.3
1,294,335	+		MPMX19_01245	0.14	-1.1
1,294,335	+		MPMX19_01245	0.14	-0.1
1,294,335	+		MPMX19_01245	0.14	-1.4
1,294,335	+		MPMX19_01245	0.14	+1.5
1,294,335	+		MPMX19_01245	0.14	-1.1
1,294,335	+		MPMX19_01245	0.14	-0.4
1,294,335	+		MPMX19_01245	0.14	-0.1
1,294,335	+		MPMX19_01245	0.14	+0.9
1,294,335	+		MPMX19_01245	0.14	-1.5
1,294,335	+		MPMX19_01245	0.14	+0.1
1,294,335	+		MPMX19_01245	0.14	-0.7
1,295,123	+				+1.0
1,295,123	+				-0.3
1,296,544	+				-0.9
1,296,544	+				-1.0
1,296,545	-				-1.7
1,296,545	-				+0.1
1,296,545	-				-1.3
1,296,545	-				-2.1
1,296,553	+				-0.8
1,296,553	+				-0.3
1,296,553	+				-0.6
1,296,553	+				-0.2
1,296,553	+				-1.2
1,296,553	+				+1.5
1,296,553	+				-1.6
1,296,554	-				+0.6
1,296,554	-				+0.7
1,296,554	-				-0.2
1,296,554	-				+0.1
1,296,554	-				+1.1
1,296,554	-				+0.7
1,296,554	-				+1.5
1,296,604	+				-0.1
1,296,604	+				+0.4
1,296,985	+		MPMX19_01247	0.55	-2.2
1,296,985	+		MPMX19_01247	0.55	-1.8
1,296,986	-		MPMX19_01247	0.56	-1.2
1,297,268	+				-0.3
1,297,269	-				+0.4
1,297,353	+				+1.2
1,297,353	+				+0.7
1,297,353	+				+0.4
1,297,353	+				-0.3
1,297,353	+				-1.0
1,297,353	+				+0.4
1,297,353	+				-0.8
1,297,353	+				+3.3
1,297,353	+				-0.9
1,297,354	-				-0.9
1,297,354	-				-1.2
1,297,354	-				+1.1
1,297,354	-				-1.1
1,297,354	-				-1.7
1,297,392	-				-0.3
1,297,401	+				-0.6
1,297,401	+				-2.9
1,297,402	-				+1.1
1,297,418	+				-0.5
1,297,418	+				-0.0
1,297,418	+				-0.6
1,297,419	-				-0.3
1,297,422	+				+0.4
1,297,423	-				-1.3
1,297,423	-				-0.8
1,297,451	+				-0.5
1,297,451	+				-0.4
1,297,451	+				-0.9
1,297,452	-				-0.8
1,297,452	-				-0.9
1,297,452	-				-0.2
1,297,452	-				-0.9
1,297,452	-				+0.0