Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_08450

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
1,851,267	-	tolQ	OKGIIK_08445	0.22	-1.0
1,851,282	-	tolQ	OKGIIK_08445	0.25	+0.4
1,851,282	-	tolQ	OKGIIK_08445	0.25	-1.2
1,851,471	-	tolQ	OKGIIK_08445	0.54	-2.6
1,851,647	-	tolQ	OKGIIK_08445	0.81	-0.7
1,851,647	-	tolQ	OKGIIK_08445	0.81	+0.1
1,851,647	-	tolQ	OKGIIK_08445	0.81	-0.5
1,851,647	-	tolQ	OKGIIK_08445	0.81	-1.3
1,851,647	-	tolQ	OKGIIK_08445	0.81	+0.0
1,851,829	+				-1.1
1,851,829	+				-2.3
1,851,829	+				+0.6
1,851,829	+				-0.1
1,851,829	+				+0.0
1,851,829	+				-2.0
1,851,829	+				-0.3
1,851,829	+				+0.7
1,851,829	+				+0.1
1,851,829	+				+0.6
1,851,829	+				-0.7
1,851,829	+				+0.1
1,851,829	+				+0.7
1,851,830	-				-0.3
1,851,830	-				-1.5
1,851,830	-				-0.7
1,851,830	-				+0.3
1,851,830	-				-0.3
1,851,830	-				+1.3
1,851,830	-				+1.0
1,851,830	-				-0.9
1,851,885	-				+0.7
1,851,973	-				-0.8
1,851,973	-				-1.5
1,852,001	+				-0.4
1,852,001	+				+0.5
1,852,001	+				-1.9
1,852,002	-				-0.8
1,852,113	+		OKGIIK_08450	0.10	-1.3
1,852,113	+		OKGIIK_08450	0.10	-0.7
1,852,113	+		OKGIIK_08450	0.10	-0.7
1,852,113	+		OKGIIK_08450	0.10	+0.9
1,852,113	+		OKGIIK_08450	0.10	-0.5
1,852,113	+		OKGIIK_08450	0.10	+0.6
1,852,113	+		OKGIIK_08450	0.10	+0.4
1,852,113	+		OKGIIK_08450	0.10	+0.1
1,852,114	-		OKGIIK_08450	0.10	-0.1
1,852,114	-		OKGIIK_08450	0.10	-0.5
1,852,114	-		OKGIIK_08450	0.10	-0.0
1,852,114	-		OKGIIK_08450	0.10	-1.8
1,852,556	+		OKGIIK_08450	0.29	-1.0
1,852,556	+		OKGIIK_08450	0.29	+0.6
1,852,556	+		OKGIIK_08450	0.29	-1.0
1,852,556	+		OKGIIK_08450	0.29	-0.8
1,852,556	+		OKGIIK_08450	0.29	+1.1
1,852,556	+		OKGIIK_08450	0.29	+0.2
1,852,556	+		OKGIIK_08450	0.29	+0.9
1,852,556	+		OKGIIK_08450	0.29	-1.6
1,852,557	-		OKGIIK_08450	0.29	+0.8
1,852,557	-		OKGIIK_08450	0.29	-1.5
1,852,557	-		OKGIIK_08450	0.29	-0.5
1,852,557	-		OKGIIK_08450	0.29	-1.7
1,852,557	-		OKGIIK_08450	0.29	+0.1
1,852,588	+		OKGIIK_08450	0.30	-1.0
1,852,589	-		OKGIIK_08450	0.30	-1.4
1,852,781	+		OKGIIK_08450	0.38	+0.6
1,852,781	+		OKGIIK_08450	0.38	+0.3
1,852,781	+		OKGIIK_08450	0.38	-0.0
1,852,781	+		OKGIIK_08450	0.38	-0.3
1,852,781	+		OKGIIK_08450	0.38	+0.9
1,852,781	+		OKGIIK_08450	0.38	+0.1
1,852,782	-		OKGIIK_08450	0.38	+0.4
1,852,782	-		OKGIIK_08450	0.38	-0.3
1,852,782	-		OKGIIK_08450	0.38	+0.7
1,852,782	-		OKGIIK_08450	0.38	-0.7
1,852,782	-		OKGIIK_08450	0.38	-1.0
1,852,782	-		OKGIIK_08450	0.38	-1.5
1,853,262	+		OKGIIK_08450	0.58	+0.4
1,853,263	-		OKGIIK_08450	0.58	-0.0
1,853,263	-		OKGIIK_08450	0.58	-0.7
1,853,300	+		OKGIIK_08450	0.60	-1.5
1,853,301	-		OKGIIK_08450	0.60	+0.0
1,853,381	+		OKGIIK_08450	0.63	-1.0
1,853,381	+		OKGIIK_08450	0.63	+0.0
1,853,401	+		OKGIIK_08450	0.64	-1.0
1,853,402	-		OKGIIK_08450	0.64	+0.1
1,853,654	+		OKGIIK_08450	0.75	+0.4
1,853,654	+		OKGIIK_08450	0.75	+1.5
1,853,654	+		OKGIIK_08450	0.75	-0.6
1,853,654	+		OKGIIK_08450	0.75	-0.2
1,853,792	+		OKGIIK_08450	0.80	-2.7
1,853,792	+		OKGIIK_08450	0.80	-0.7
1,853,793	-		OKGIIK_08450	0.80	-0.9
1,853,793	-		OKGIIK_08450	0.80	+0.3
1,854,208	+				-0.5
1,854,209	-				-0.1
1,854,245	+				-0.9
1,854,246	-				-0.0
1,854,246	-				+0.8
1,854,246	-				-1.4
1,854,246	-				-1.3
1,854,246	-				-0.9
1,855,010	-				-0.8
1,855,010	-				+1.2