Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_06415 and arsC are separated by 367 nucleotides arsC and OKGIIK_06425 are separated by 23 nucleotides OKGIIK_06425 and scpB overlap by 4 nucleotides scpB and scpA overlap by 4 nucleotides
OKGIIK_06415: OKGIIK_06415 - Hydrolase, at 1,412,000 to 1,412,638
_06415
OKGIIK_06420: arsC - arsenate reductase (glutaredoxin), at 1,413,006 to 1,413,350
arsC
OKGIIK_06425: OKGIIK_06425 - Pseudouridine synthase, at 1,413,374 to 1,414,912
_06425
OKGIIK_06430: scpB - SMC-Scp complex subunit ScpB, at 1,414,909 to 1,415,724
scpB
OKGIIK_06435: scpA - Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family, at 1,415,721 to 1,416,653
scpA
Position (kb)
1413
1414
1415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1412.660 kb on + strand at 1412.660 kb on + strand at 1412.660 kb on + strand at 1412.660 kb on + strand at 1412.660 kb on + strand at 1412.661 kb on - strand at 1412.661 kb on - strand at 1412.661 kb on - strand at 1412.661 kb on - strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.737 kb on + strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.738 kb on - strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.741 kb on + strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.742 kb on - strand at 1412.816 kb on + strand at 1412.816 kb on + strand at 1412.816 kb on + strand at 1412.817 kb on - strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.847 kb on + strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.848 kb on - strand at 1412.894 kb on + strand at 1412.894 kb on + strand at 1412.894 kb on + strand at 1412.894 kb on + strand at 1412.895 kb on - strand at 1412.895 kb on - strand at 1412.895 kb on - strand at 1412.895 kb on - strand at 1413.160 kb on + strand, within arsC at 1413.161 kb on - strand, within arsC at 1413.161 kb on - strand, within arsC at 1413.161 kb on - strand, within arsC at 1413.161 kb on - strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.256 kb on + strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.257 kb on - strand, within arsC at 1413.337 kb on + strand at 1413.337 kb on + strand at 1413.337 kb on + strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.338 kb on - strand at 1413.487 kb on + strand at 1413.488 kb on - strand at 1413.488 kb on - strand at 1413.655 kb on - strand, within OKGIIK_06425 at 1413.655 kb on - strand, within OKGIIK_06425 at 1413.808 kb on + strand, within OKGIIK_06425 at 1415.241 kb on - strand, within scpB at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA at 1415.822 kb on - strand, within scpA
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 1,412,660 + +1.0 1,412,660 + -0.8 1,412,660 + +1.3 1,412,660 + +0.9 1,412,660 + -0.8 1,412,661 - +0.6 1,412,661 - -1.2 1,412,661 - +0.3 1,412,661 - +0.1 1,412,737 + +0.9 1,412,737 + -0.1 1,412,737 + -2.4 1,412,737 + -0.8 1,412,737 + -0.1 1,412,737 + -0.1 1,412,737 + +0.6 1,412,737 + +0.3 1,412,738 - -0.9 1,412,738 - -1.3 1,412,738 - -0.1 1,412,738 - +0.3 1,412,738 - -0.1 1,412,738 - -2.0 1,412,738 - -2.4 1,412,741 + +1.6 1,412,741 + -0.9 1,412,741 + -0.1 1,412,741 + +0.9 1,412,741 + +1.2 1,412,741 + +0.4 1,412,741 + +0.3 1,412,741 + -0.4 1,412,741 + -1.1 1,412,741 + -1.4 1,412,742 - -0.9 1,412,742 - -0.9 1,412,742 - +0.0 1,412,742 - +0.9 1,412,742 - -0.5 1,412,742 - +0.3 1,412,742 - -0.4 1,412,742 - +1.2 1,412,742 - -0.7 1,412,742 - -0.7 1,412,742 - -1.9 1,412,742 - +0.9 1,412,816 + +0.8 1,412,816 + +0.1 1,412,816 + -0.1 1,412,817 - -0.5 1,412,847 + +0.9 1,412,847 + +0.3 1,412,847 + +0.1 1,412,847 + -1.8 1,412,847 + -0.2 1,412,847 + +1.1 1,412,847 + -2.8 1,412,847 + +0.0 1,412,848 - -1.0 1,412,848 - +0.7 1,412,848 - +0.1 1,412,848 - +2.2 1,412,848 - -0.4 1,412,848 - +0.8 1,412,848 - +0.7 1,412,848 - -1.1 1,412,848 - -0.3 1,412,848 - -0.2 1,412,848 - +0.6 1,412,848 - -1.4 1,412,894 + +0.5 1,412,894 + +1.2 1,412,894 + -0.2 1,412,894 + -0.6 1,412,895 - +0.9 1,412,895 - +0.8 1,412,895 - +1.9 1,412,895 - -1.4 1,413,160 + arsC OKGIIK_06420 0.45 -1.4 1,413,161 - arsC OKGIIK_06420 0.45 -0.1 1,413,161 - arsC OKGIIK_06420 0.45 +0.9 1,413,161 - arsC OKGIIK_06420 0.45 +1.0 1,413,161 - arsC OKGIIK_06420 0.45 +1.9 1,413,256 + arsC OKGIIK_06420 0.72 -1.1 1,413,256 + arsC OKGIIK_06420 0.72 -0.4 1,413,256 + arsC OKGIIK_06420 0.72 +0.0 1,413,256 + arsC OKGIIK_06420 0.72 +0.2 1,413,256 + arsC OKGIIK_06420 0.72 -0.4 1,413,256 + arsC OKGIIK_06420 0.72 -0.4 1,413,256 + arsC OKGIIK_06420 0.72 +0.5 1,413,256 + arsC OKGIIK_06420 0.72 +1.5 1,413,256 + arsC OKGIIK_06420 0.72 -0.1 1,413,256 + arsC OKGIIK_06420 0.72 -1.1 1,413,257 - arsC OKGIIK_06420 0.73 +0.9 1,413,257 - arsC OKGIIK_06420 0.73 -0.4 1,413,257 - arsC OKGIIK_06420 0.73 -0.7 1,413,257 - arsC OKGIIK_06420 0.73 +1.2 1,413,257 - arsC OKGIIK_06420 0.73 +1.6 1,413,257 - arsC OKGIIK_06420 0.73 -0.3 1,413,257 - arsC OKGIIK_06420 0.73 +0.6 1,413,257 - arsC OKGIIK_06420 0.73 -0.4 1,413,257 - arsC OKGIIK_06420 0.73 -0.1 1,413,257 - arsC OKGIIK_06420 0.73 -0.1 1,413,257 - arsC OKGIIK_06420 0.73 -0.1 1,413,257 - arsC OKGIIK_06420 0.73 -1.0 1,413,257 - arsC OKGIIK_06420 0.73 -0.1 1,413,337 + +0.0 1,413,337 + +0.3 1,413,337 + -1.7 1,413,338 - -1.3 1,413,338 - +0.9 1,413,338 - -0.6 1,413,338 - -0.4 1,413,338 - -0.4 1,413,338 - -0.1 1,413,338 - +0.9 1,413,338 - -0.3 1,413,338 - -0.4 1,413,338 - -0.5 1,413,338 - -0.9 1,413,338 - -0.4 1,413,338 - +0.1 1,413,338 - -3.0 1,413,487 + -1.6 1,413,488 - -0.4 1,413,488 - +0.2 1,413,655 - OKGIIK_06425 0.18 -0.2 1,413,655 - OKGIIK_06425 0.18 +1.9 1,413,808 + OKGIIK_06425 0.28 -1.1 1,415,241 - scpB OKGIIK_06430 0.41 -2.2 1,415,822 - scpA OKGIIK_06435 0.11 +0.4 1,415,822 - scpA OKGIIK_06435 0.11 -0.3 1,415,822 - scpA OKGIIK_06435 0.11 -0.1 1,415,822 - scpA OKGIIK_06435 0.11 -0.7 1,415,822 - scpA OKGIIK_06435 0.11 +0.0 1,415,822 - scpA OKGIIK_06435 0.11 +0.7 1,415,822 - scpA OKGIIK_06435 0.11 +1.6 1,415,822 - scpA OKGIIK_06435 0.11 -0.9 1,415,822 - scpA OKGIIK_06435 0.11 +0.2 1,415,822 - scpA OKGIIK_06435 0.11 +0.3
Or see this region's nucleotide sequence