Experiment: growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17970 and SGL_RS17975 are separated by 119 nucleotides SGL_RS17975 and SGL_RS17980 are separated by 130 nucleotides SGL_RS17980 and SGL_RS17985 are separated by 102 nucleotides
SGL_RS17970: SGL_RS17970 - hypothetical protein, at 3,484,623 to 3,485,717
_RS17970
SGL_RS17975: SGL_RS17975 - hypothetical protein, at 3,485,837 to 3,486,562
_RS17975
SGL_RS17980: SGL_RS17980 - hypothetical protein, at 3,486,693 to 3,489,911
_RS17980
SGL_RS17985: SGL_RS17985 - hypothetical protein, at 3,490,014 to 3,491,501
_RS17985
Position (kb)
3486
3487
3488
3489
3490 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3486.184 kb on + strand, within SGL_RS17975 at 3486.438 kb on - strand, within SGL_RS17975 at 3486.588 kb on - strand at 3487.092 kb on - strand, within SGL_RS17980 at 3487.177 kb on - strand, within SGL_RS17980 at 3487.521 kb on + strand, within SGL_RS17980 at 3487.776 kb on + strand, within SGL_RS17980 at 3487.802 kb on + strand, within SGL_RS17980 at 3488.316 kb on + strand, within SGL_RS17980 at 3488.362 kb on - strand, within SGL_RS17980 at 3488.420 kb on + strand, within SGL_RS17980 at 3488.429 kb on + strand, within SGL_RS17980 at 3488.657 kb on + strand, within SGL_RS17980 at 3488.675 kb on - strand, within SGL_RS17980 at 3488.676 kb on - strand, within SGL_RS17980 at 3488.724 kb on + strand, within SGL_RS17980 at 3489.533 kb on - strand, within SGL_RS17980 at 3489.540 kb on - strand, within SGL_RS17980 at 3489.810 kb on - strand at 3490.039 kb on - strand at 3490.233 kb on + strand, within SGL_RS17985 at 3490.259 kb on - strand, within SGL_RS17985 at 3490.286 kb on - strand, within SGL_RS17985 at 3490.370 kb on + strand, within SGL_RS17985 at 3490.474 kb on + strand, within SGL_RS17985 at 3490.474 kb on + strand, within SGL_RS17985 at 3490.474 kb on + strand, within SGL_RS17985 at 3490.610 kb on - strand, within SGL_RS17985 at 3490.614 kb on + strand, within SGL_RS17985 at 3490.689 kb on + strand, within SGL_RS17985 at 3490.708 kb on - strand, within SGL_RS17985 at 3490.761 kb on + strand, within SGL_RS17985 at 3490.793 kb on + strand, within SGL_RS17985 at 3490.825 kb on - strand, within SGL_RS17985 at 3490.907 kb on + strand, within SGL_RS17985 at 3490.908 kb on + strand, within SGL_RS17985
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation remove 3,486,184 + SGL_RS17975 0.48 +0.2 3,486,438 - SGL_RS17975 0.83 -0.1 3,486,588 - +0.4 3,487,092 - SGL_RS17980 0.12 +0.3 3,487,177 - SGL_RS17980 0.15 +0.3 3,487,521 + SGL_RS17980 0.26 +0.7 3,487,776 + SGL_RS17980 0.34 +0.1 3,487,802 + SGL_RS17980 0.34 -0.3 3,488,316 + SGL_RS17980 0.50 +0.1 3,488,362 - SGL_RS17980 0.52 +0.1 3,488,420 + SGL_RS17980 0.54 +0.2 3,488,429 + SGL_RS17980 0.54 +0.2 3,488,657 + SGL_RS17980 0.61 +1.4 3,488,675 - SGL_RS17980 0.62 -0.2 3,488,676 - SGL_RS17980 0.62 +0.2 3,488,724 + SGL_RS17980 0.63 +0.5 3,489,533 - SGL_RS17980 0.88 +0.4 3,489,540 - SGL_RS17980 0.88 +0.8 3,489,810 - -0.6 3,490,039 - -0.2 3,490,233 + SGL_RS17985 0.15 +3.0 3,490,259 - SGL_RS17985 0.16 -0.4 3,490,286 - SGL_RS17985 0.18 -0.1 3,490,370 + SGL_RS17985 0.24 +0.2 3,490,474 + SGL_RS17985 0.31 -0.1 3,490,474 + SGL_RS17985 0.31 -0.1 3,490,474 + SGL_RS17985 0.31 +0.0 3,490,610 - SGL_RS17985 0.40 -0.1 3,490,614 + SGL_RS17985 0.40 -0.1 3,490,689 + SGL_RS17985 0.45 +0.6 3,490,708 - SGL_RS17985 0.47 -0.1 3,490,761 + SGL_RS17985 0.50 -0.1 3,490,793 + SGL_RS17985 0.52 +0.3 3,490,825 - SGL_RS17985 0.55 -0.1 3,490,907 + SGL_RS17985 0.60 -0.2 3,490,908 + SGL_RS17985 0.60 -0.2
Or see this region's nucleotide sequence