Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06140 and MPMX19_06141 are separated by 331 nucleotides MPMX19_06141 and MPMX19_06142 are separated by 10 nucleotides MPMX19_06142 and MPMX19_06143 are separated by 101 nucleotides
MPMX19_06140: MPMX19_06140 - Alanine racemase, biosynthetic, at 327,617 to 328,738
_06140
MPMX19_06141: MPMX19_06141 - Intermembrane phospholipid transport system permease protein MlaE, at 329,070 to 329,846
_06141
MPMX19_06142: MPMX19_06142 - putative ribonucleotide transport ATP-binding protein mkl, at 329,857 to 330,630
_06142
MPMX19_06143: MPMX19_06143 - Endonuclease III, at 330,732 to 331,412
_06143
Position (kb) 329
330 Strain fitness (log2 ratio) -2
-1
0
1 at 328.721 kb on + strand at 328.722 kb on - strand at 328.722 kb on - strand at 328.722 kb on - strand at 328.736 kb on + strand at 328.736 kb on + strand at 328.737 kb on - strand at 328.796 kb on - strand at 328.905 kb on - strand at 328.905 kb on - strand at 328.905 kb on - strand at 328.905 kb on - strand at 329.003 kb on + strand at 329.003 kb on + strand at 329.003 kb on + strand at 329.020 kb on + strand at 329.020 kb on + strand at 329.020 kb on + strand at 329.020 kb on + strand at 329.021 kb on - strand at 329.021 kb on - strand at 329.068 kb on + strand at 329.068 kb on + strand at 329.069 kb on - strand at 329.181 kb on + strand, within MPMX19_06141 at 329.224 kb on - strand, within MPMX19_06141 at 329.224 kb on - strand, within MPMX19_06141 at 329.286 kb on + strand, within MPMX19_06141 at 329.287 kb on - strand, within MPMX19_06141 at 329.481 kb on + strand, within MPMX19_06141 at 329.487 kb on + strand, within MPMX19_06141 at 329.488 kb on - strand, within MPMX19_06141 at 329.488 kb on - strand, within MPMX19_06141 at 329.616 kb on + strand, within MPMX19_06141 at 329.616 kb on + strand, within MPMX19_06141 at 329.617 kb on - strand, within MPMX19_06141 at 329.617 kb on - strand, within MPMX19_06141 at 329.617 kb on - strand, within MPMX19_06141 at 329.617 kb on - strand, within MPMX19_06141 at 329.715 kb on + strand, within MPMX19_06141 at 329.811 kb on + strand at 329.811 kb on + strand at 329.812 kb on - strand at 329.812 kb on - strand at 330.193 kb on - strand, within MPMX19_06142 at 330.505 kb on + strand, within MPMX19_06142 at 330.505 kb on + strand, within MPMX19_06142 at 330.505 kb on + strand, within MPMX19_06142 at 330.506 kb on - strand, within MPMX19_06142 at 330.506 kb on - strand, within MPMX19_06142 at 330.565 kb on + strand at 330.565 kb on + strand at 330.566 kb on - strand at 330.628 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 328,721 + -0.0 328,722 - +0.1 328,722 - -0.9 328,722 - -0.4 328,736 + -0.8 328,736 + -2.0 328,737 - -2.1 328,796 - -1.8 328,905 - -1.1 328,905 - -1.3 328,905 - -0.5 328,905 - -1.9 329,003 + -0.8 329,003 + +1.5 329,003 + +0.1 329,020 + -1.6 329,020 + -0.4 329,020 + -0.6 329,020 + +0.9 329,021 - -0.7 329,021 - +1.3 329,068 + +0.5 329,068 + +0.1 329,069 - -0.2 329,181 + MPMX19_06141 0.14 -1.6 329,224 - MPMX19_06141 0.20 -0.0 329,224 - MPMX19_06141 0.20 -0.0 329,286 + MPMX19_06141 0.28 +0.0 329,287 - MPMX19_06141 0.28 +0.8 329,481 + MPMX19_06141 0.53 -0.7 329,487 + MPMX19_06141 0.54 -0.1 329,488 - MPMX19_06141 0.54 +0.0 329,488 - MPMX19_06141 0.54 -0.7 329,616 + MPMX19_06141 0.70 -1.3 329,616 + MPMX19_06141 0.70 +0.2 329,617 - MPMX19_06141 0.70 -1.2 329,617 - MPMX19_06141 0.70 +0.2 329,617 - MPMX19_06141 0.70 -0.6 329,617 - MPMX19_06141 0.70 -0.0 329,715 + MPMX19_06141 0.83 -0.6 329,811 + -0.3 329,811 + -1.9 329,812 - -0.4 329,812 - +1.4 330,193 - MPMX19_06142 0.43 +0.2 330,505 + MPMX19_06142 0.84 +1.2 330,505 + MPMX19_06142 0.84 -1.0 330,505 + MPMX19_06142 0.84 -0.9 330,506 - MPMX19_06142 0.84 +0.2 330,506 - MPMX19_06142 0.84 -1.0 330,565 + -0.8 330,565 + -0.8 330,566 - +1.0 330,628 + -1.8
Or see this region's nucleotide sequence