Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05336 and MPMX19_05337 are separated by 3 nucleotides MPMX19_05337 and MPMX19_05338 are separated by 39 nucleotides
MPMX19_05336: MPMX19_05336 - Ribosome-associated ATPase, at 5,733 to 8,570
_05336
MPMX19_05337: MPMX19_05337 - Inner membrane transport permease YhhJ, at 8,574 to 9,701
_05337
MPMX19_05338: MPMX19_05338 - Phosphomannomutase/phosphoglucomutase, at 9,741 to 11,141
_05338
Position (kb)
8
9
10 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.641 kb on + strand, within MPMX19_05336 at 7.642 kb on - strand, within MPMX19_05336 at 7.642 kb on - strand, within MPMX19_05336 at 7.642 kb on - strand, within MPMX19_05336 at 7.642 kb on - strand, within MPMX19_05336 at 7.642 kb on - strand, within MPMX19_05336 at 7.854 kb on + strand, within MPMX19_05336 at 7.854 kb on + strand, within MPMX19_05336 at 7.854 kb on + strand, within MPMX19_05336 at 7.854 kb on + strand, within MPMX19_05336 at 7.855 kb on - strand, within MPMX19_05336 at 7.855 kb on - strand, within MPMX19_05336 at 7.855 kb on - strand, within MPMX19_05336 at 7.954 kb on - strand, within MPMX19_05336 at 7.954 kb on - strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.085 kb on + strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.086 kb on - strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.136 kb on + strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.137 kb on - strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.247 kb on + strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.248 kb on - strand, within MPMX19_05336 at 8.664 kb on + strand at 8.664 kb on + strand at 8.664 kb on + strand at 8.664 kb on + strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.665 kb on - strand at 8.685 kb on + strand at 8.685 kb on + strand at 8.685 kb on + strand at 8.859 kb on + strand, within MPMX19_05337 at 8.859 kb on + strand, within MPMX19_05337 at 8.860 kb on - strand, within MPMX19_05337 at 8.860 kb on - strand, within MPMX19_05337 at 8.860 kb on - strand, within MPMX19_05337 at 8.860 kb on - strand, within MPMX19_05337 at 8.860 kb on - strand, within MPMX19_05337 at 9.075 kb on + strand, within MPMX19_05337 at 9.075 kb on + strand, within MPMX19_05337 at 9.075 kb on + strand, within MPMX19_05337 at 9.075 kb on + strand, within MPMX19_05337 at 9.076 kb on - strand, within MPMX19_05337 at 9.076 kb on - strand, within MPMX19_05337 at 9.092 kb on + strand, within MPMX19_05337 at 9.093 kb on - strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.297 kb on + strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.298 kb on - strand, within MPMX19_05337 at 9.372 kb on + strand, within MPMX19_05337 at 9.372 kb on + strand, within MPMX19_05337 at 9.372 kb on + strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.373 kb on - strand, within MPMX19_05337 at 9.700 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 7,641 + MPMX19_05336 0.67 -1.0 7,641 + MPMX19_05336 0.67 +0.9 7,641 + MPMX19_05336 0.67 -0.0 7,641 + MPMX19_05336 0.67 +0.5 7,641 + MPMX19_05336 0.67 +0.7 7,641 + MPMX19_05336 0.67 -0.2 7,641 + MPMX19_05336 0.67 -1.2 7,641 + MPMX19_05336 0.67 -0.6 7,641 + MPMX19_05336 0.67 -0.7 7,642 - MPMX19_05336 0.67 -1.6 7,642 - MPMX19_05336 0.67 -0.7 7,642 - MPMX19_05336 0.67 +1.1 7,642 - MPMX19_05336 0.67 +0.2 7,642 - MPMX19_05336 0.67 +1.1 7,854 + MPMX19_05336 0.75 -1.3 7,854 + MPMX19_05336 0.75 -0.4 7,854 + MPMX19_05336 0.75 -0.8 7,854 + MPMX19_05336 0.75 -1.9 7,855 - MPMX19_05336 0.75 -2.2 7,855 - MPMX19_05336 0.75 +0.0 7,855 - MPMX19_05336 0.75 -0.2 7,954 - MPMX19_05336 0.78 -0.2 7,954 - MPMX19_05336 0.78 -1.6 8,085 + MPMX19_05336 0.83 -1.7 8,085 + MPMX19_05336 0.83 -0.8 8,085 + MPMX19_05336 0.83 +1.5 8,085 + MPMX19_05336 0.83 +0.8 8,085 + MPMX19_05336 0.83 +0.9 8,085 + MPMX19_05336 0.83 +0.6 8,085 + MPMX19_05336 0.83 -0.5 8,085 + MPMX19_05336 0.83 +0.2 8,085 + MPMX19_05336 0.83 -0.1 8,085 + MPMX19_05336 0.83 -0.7 8,086 - MPMX19_05336 0.83 -2.3 8,086 - MPMX19_05336 0.83 +1.4 8,086 - MPMX19_05336 0.83 -1.5 8,086 - MPMX19_05336 0.83 -1.3 8,086 - MPMX19_05336 0.83 -0.1 8,086 - MPMX19_05336 0.83 -0.1 8,086 - MPMX19_05336 0.83 -1.1 8,086 - MPMX19_05336 0.83 -1.7 8,136 + MPMX19_05336 0.85 -0.5 8,136 + MPMX19_05336 0.85 +1.9 8,136 + MPMX19_05336 0.85 -0.6 8,136 + MPMX19_05336 0.85 +1.3 8,136 + MPMX19_05336 0.85 -1.8 8,136 + MPMX19_05336 0.85 +0.3 8,136 + MPMX19_05336 0.85 +0.8 8,136 + MPMX19_05336 0.85 +1.1 8,136 + MPMX19_05336 0.85 +0.8 8,136 + MPMX19_05336 0.85 +0.2 8,136 + MPMX19_05336 0.85 +0.8 8,137 - MPMX19_05336 0.85 -1.1 8,137 - MPMX19_05336 0.85 -0.6 8,137 - MPMX19_05336 0.85 -0.7 8,137 - MPMX19_05336 0.85 -2.3 8,137 - MPMX19_05336 0.85 +1.4 8,137 - MPMX19_05336 0.85 -1.4 8,137 - MPMX19_05336 0.85 -0.2 8,137 - MPMX19_05336 0.85 -0.5 8,137 - MPMX19_05336 0.85 -0.1 8,247 + MPMX19_05336 0.89 +0.2 8,247 + MPMX19_05336 0.89 +0.5 8,247 + MPMX19_05336 0.89 +0.0 8,247 + MPMX19_05336 0.89 +0.2 8,247 + MPMX19_05336 0.89 -0.2 8,247 + MPMX19_05336 0.89 -0.1 8,247 + MPMX19_05336 0.89 +0.1 8,247 + MPMX19_05336 0.89 +0.8 8,247 + MPMX19_05336 0.89 +0.2 8,247 + MPMX19_05336 0.89 -1.6 8,247 + MPMX19_05336 0.89 +1.6 8,247 + MPMX19_05336 0.89 -0.8 8,247 + MPMX19_05336 0.89 +0.0 8,247 + MPMX19_05336 0.89 +0.3 8,247 + MPMX19_05336 0.89 -0.2 8,247 + MPMX19_05336 0.89 +1.3 8,247 + MPMX19_05336 0.89 +0.4 8,247 + MPMX19_05336 0.89 -0.6 8,247 + MPMX19_05336 0.89 -0.8 8,248 - MPMX19_05336 0.89 -0.6 8,248 - MPMX19_05336 0.89 -0.3 8,248 - MPMX19_05336 0.89 -0.6 8,248 - MPMX19_05336 0.89 +1.0 8,248 - MPMX19_05336 0.89 +0.3 8,248 - MPMX19_05336 0.89 +1.2 8,248 - MPMX19_05336 0.89 -0.2 8,248 - MPMX19_05336 0.89 +0.2 8,248 - MPMX19_05336 0.89 +0.6 8,248 - MPMX19_05336 0.89 -0.3 8,248 - MPMX19_05336 0.89 -1.2 8,248 - MPMX19_05336 0.89 -0.6 8,248 - MPMX19_05336 0.89 -0.7 8,248 - MPMX19_05336 0.89 -1.4 8,248 - MPMX19_05336 0.89 -1.5 8,248 - MPMX19_05336 0.89 -1.4 8,248 - MPMX19_05336 0.89 -1.2 8,248 - MPMX19_05336 0.89 -2.6 8,248 - MPMX19_05336 0.89 -0.2 8,248 - MPMX19_05336 0.89 -1.1 8,248 - MPMX19_05336 0.89 -1.2 8,664 + -0.1 8,664 + +0.1 8,664 + -0.2 8,664 + -1.3 8,665 - -0.6 8,665 - +0.2 8,665 - -1.1 8,665 - -0.9 8,665 - -1.2 8,665 - +2.0 8,665 - +0.1 8,685 + +0.8 8,685 + -0.5 8,685 + -1.4 8,859 + MPMX19_05337 0.25 +1.5 8,859 + MPMX19_05337 0.25 -1.2 8,860 - MPMX19_05337 0.25 -1.1 8,860 - MPMX19_05337 0.25 +1.0 8,860 - MPMX19_05337 0.25 -0.8 8,860 - MPMX19_05337 0.25 -0.8 8,860 - MPMX19_05337 0.25 -0.7 9,075 + MPMX19_05337 0.44 +0.5 9,075 + MPMX19_05337 0.44 -1.8 9,075 + MPMX19_05337 0.44 -1.2 9,075 + MPMX19_05337 0.44 +0.4 9,076 - MPMX19_05337 0.45 -0.3 9,076 - MPMX19_05337 0.45 +0.3 9,092 + MPMX19_05337 0.46 -0.8 9,093 - MPMX19_05337 0.46 -1.6 9,297 + MPMX19_05337 0.64 -0.2 9,297 + MPMX19_05337 0.64 -0.1 9,297 + MPMX19_05337 0.64 -0.2 9,297 + MPMX19_05337 0.64 -1.4 9,297 + MPMX19_05337 0.64 +0.6 9,297 + MPMX19_05337 0.64 -1.5 9,297 + MPMX19_05337 0.64 +0.5 9,297 + MPMX19_05337 0.64 +0.3 9,297 + MPMX19_05337 0.64 +0.3 9,297 + MPMX19_05337 0.64 -1.6 9,297 + MPMX19_05337 0.64 -0.2 9,297 + MPMX19_05337 0.64 -1.2 9,298 - MPMX19_05337 0.64 +0.3 9,298 - MPMX19_05337 0.64 +0.2 9,298 - MPMX19_05337 0.64 +0.5 9,298 - MPMX19_05337 0.64 -1.9 9,298 - MPMX19_05337 0.64 -0.1 9,298 - MPMX19_05337 0.64 -2.4 9,298 - MPMX19_05337 0.64 -1.5 9,298 - MPMX19_05337 0.64 +0.0 9,298 - MPMX19_05337 0.64 -0.2 9,298 - MPMX19_05337 0.64 -0.1 9,298 - MPMX19_05337 0.64 +0.0 9,298 - MPMX19_05337 0.64 -0.5 9,372 + MPMX19_05337 0.71 +0.7 9,372 + MPMX19_05337 0.71 +0.4 9,372 + MPMX19_05337 0.71 -0.8 9,373 - MPMX19_05337 0.71 -0.6 9,373 - MPMX19_05337 0.71 -2.2 9,373 - MPMX19_05337 0.71 +1.3 9,373 - MPMX19_05337 0.71 -0.2 9,373 - MPMX19_05337 0.71 -0.4 9,373 - MPMX19_05337 0.71 +0.8 9,373 - MPMX19_05337 0.71 -0.7 9,700 - -1.1
Or see this region's nucleotide sequence