Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02508 and MPMX19_02509 are separated by 406 nucleotides MPMX19_02509 and MPMX19_02510 are separated by 487 nucleotides
MPMX19_02508: MPMX19_02508 - GTP cyclohydrolase 1, at 2,625,388 to 2,626,062
_02508
MPMX19_02509: MPMX19_02509 - Protein ApaG, at 2,626,469 to 2,626,861
_02509
MPMX19_02510: MPMX19_02510 - hypothetical protein, at 2,627,349 to 2,628,053
_02510
Position (kb)
2626
2627 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.087 kb on - strand at 2626.177 kb on - strand at 2626.177 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.236 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.308 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.312 kb on - strand at 2626.313 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.324 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.411 kb on + strand at 2626.412 kb on - strand at 2626.416 kb on + strand at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.916 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2627.056 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,626,087 - -0.7 2,626,087 - +0.7 2,626,087 - -1.0 2,626,087 - -1.2 2,626,177 - -0.5 2,626,177 - -1.7 2,626,236 - -0.5 2,626,236 - -0.6 2,626,236 - -1.0 2,626,236 - +1.0 2,626,236 - +0.4 2,626,236 - -0.4 2,626,236 - -1.3 2,626,236 - -1.1 2,626,236 - +1.3 2,626,236 - -0.6 2,626,236 - +0.2 2,626,236 - +0.1 2,626,236 - -0.2 2,626,236 - +0.1 2,626,236 - +0.5 2,626,236 - -2.3 2,626,236 - +0.5 2,626,236 - -0.8 2,626,308 - -0.5 2,626,308 - -0.7 2,626,308 - -1.4 2,626,308 - -0.7 2,626,308 - -0.2 2,626,308 - +0.5 2,626,308 - +0.1 2,626,308 - -2.5 2,626,308 - +0.8 2,626,308 - -1.1 2,626,308 - +0.1 2,626,308 - -0.5 2,626,308 - +0.4 2,626,312 - -0.5 2,626,312 - -0.7 2,626,312 - -2.8 2,626,312 - -1.3 2,626,312 - +0.4 2,626,312 - -0.7 2,626,312 - -0.4 2,626,313 - -0.2 2,626,324 - -0.8 2,626,324 - -0.7 2,626,324 - -0.7 2,626,324 - -0.9 2,626,324 - -1.1 2,626,324 - -1.9 2,626,324 - -1.1 2,626,324 - +0.7 2,626,349 - -1.0 2,626,349 - -1.1 2,626,349 - +0.8 2,626,349 - +0.8 2,626,349 - -0.3 2,626,411 + -0.3 2,626,412 - -1.2 2,626,416 + +0.4 2,626,560 + MPMX19_02509 0.23 -0.3 2,626,560 + MPMX19_02509 0.23 -1.4 2,626,560 + MPMX19_02509 0.23 -0.1 2,626,560 + MPMX19_02509 0.23 -0.2 2,626,560 + MPMX19_02509 0.23 -0.5 2,626,560 + MPMX19_02509 0.23 -0.5 2,626,560 + MPMX19_02509 0.23 -1.0 2,626,560 + MPMX19_02509 0.23 -0.2 2,626,560 + MPMX19_02509 0.23 -0.3 2,626,560 + MPMX19_02509 0.23 -1.7 2,626,560 + MPMX19_02509 0.23 -0.5 2,626,561 - MPMX19_02509 0.23 +0.8 2,626,561 - MPMX19_02509 0.23 -1.3 2,626,561 - MPMX19_02509 0.23 -0.7 2,626,561 - MPMX19_02509 0.23 -1.5 2,626,561 - MPMX19_02509 0.23 +0.5 2,626,611 + MPMX19_02509 0.36 -1.3 2,626,611 + MPMX19_02509 0.36 -2.4 2,626,611 + MPMX19_02509 0.36 -0.3 2,626,611 + MPMX19_02509 0.36 +0.3 2,626,611 + MPMX19_02509 0.36 -1.6 2,626,611 + MPMX19_02509 0.36 -0.1 2,626,611 + MPMX19_02509 0.36 -0.0 2,626,611 + MPMX19_02509 0.36 -0.3 2,626,611 + MPMX19_02509 0.36 -0.6 2,626,612 - MPMX19_02509 0.36 -1.2 2,626,612 - MPMX19_02509 0.36 +0.8 2,626,612 - MPMX19_02509 0.36 -0.7 2,626,612 - MPMX19_02509 0.36 -0.2 2,626,612 - MPMX19_02509 0.36 +0.1 2,626,612 - MPMX19_02509 0.36 +0.4 2,626,612 - MPMX19_02509 0.36 +1.1 2,626,764 + MPMX19_02509 0.75 -0.5 2,626,764 + MPMX19_02509 0.75 -0.6 2,626,764 + MPMX19_02509 0.75 +2.8 2,626,764 + MPMX19_02509 0.75 -0.0 2,626,764 + MPMX19_02509 0.75 -1.9 2,626,764 + MPMX19_02509 0.75 -0.2 2,626,764 + MPMX19_02509 0.75 -0.1 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 -0.3 2,626,764 + MPMX19_02509 0.75 +0.1 2,626,764 + MPMX19_02509 0.75 -1.7 2,626,764 + MPMX19_02509 0.75 -0.2 2,626,764 + MPMX19_02509 0.75 +0.1 2,626,764 + MPMX19_02509 0.75 -1.0 2,626,764 + MPMX19_02509 0.75 -1.4 2,626,764 + MPMX19_02509 0.75 -1.5 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 +0.4 2,626,764 + MPMX19_02509 0.75 -1.2 2,626,764 + MPMX19_02509 0.75 +1.1 2,626,764 + MPMX19_02509 0.75 -1.5 2,626,764 + MPMX19_02509 0.75 -0.5 2,626,764 + MPMX19_02509 0.75 -2.2 2,626,764 + MPMX19_02509 0.75 +0.8 2,626,764 + MPMX19_02509 0.75 -2.3 2,626,764 + MPMX19_02509 0.75 -1.4 2,626,765 - MPMX19_02509 0.75 -0.2 2,626,765 - MPMX19_02509 0.75 -0.0 2,626,765 - MPMX19_02509 0.75 -0.5 2,626,765 - MPMX19_02509 0.75 +0.0 2,626,765 - MPMX19_02509 0.75 -1.2 2,626,765 - MPMX19_02509 0.75 +1.3 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 -0.7 2,626,765 - MPMX19_02509 0.75 -1.0 2,626,765 - MPMX19_02509 0.75 +0.6 2,626,765 - MPMX19_02509 0.75 +0.2 2,626,765 - MPMX19_02509 0.75 +0.5 2,626,765 - MPMX19_02509 0.75 -0.5 2,626,765 - MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 -1.2 2,626,765 - MPMX19_02509 0.75 -1.0 2,626,765 - MPMX19_02509 0.75 -2.1 2,626,765 - MPMX19_02509 0.75 +0.3 2,626,765 - MPMX19_02509 0.75 -1.3 2,626,765 - MPMX19_02509 0.75 +1.0 2,626,765 - MPMX19_02509 0.75 -0.6 2,626,765 - MPMX19_02509 0.75 -0.9 2,626,765 - MPMX19_02509 0.75 -0.7 2,626,765 - MPMX19_02509 0.75 -0.5 2,626,765 - MPMX19_02509 0.75 -0.5 2,626,857 + -1.1 2,626,857 + -0.4 2,626,857 + -1.2 2,626,857 + -2.0 2,626,857 + -0.3 2,626,857 + -0.3 2,626,857 + -0.3 2,626,857 + -1.0 2,626,857 + -0.5 2,626,857 + +0.8 2,626,857 + -1.3 2,626,857 + -1.2 2,626,857 + +0.5 2,626,857 + +0.2 2,626,857 + -1.0 2,626,857 + -0.7 2,626,857 + -0.6 2,626,857 + -2.1 2,626,857 + -0.4 2,626,857 + +0.1 2,626,857 + -0.5 2,626,858 - -1.0 2,626,858 - +0.7 2,626,858 - +0.2 2,626,858 - -0.7 2,626,858 - +0.7 2,626,858 - -0.2 2,626,858 - +0.2 2,626,858 - +0.4 2,626,858 - -0.2 2,626,858 - -1.2 2,626,858 - +0.3 2,626,858 - -0.2 2,626,858 - -1.2 2,626,858 - -1.5 2,626,858 - +1.8 2,626,858 - +0.6 2,626,858 - +0.8 2,626,858 - +1.8 2,626,858 - -1.0 2,626,858 - -0.5 2,626,858 - -0.5 2,626,858 - +0.4 2,626,858 - -0.7 2,626,858 - +0.1 2,626,858 - -0.7 2,626,858 - -0.7 2,626,858 - +0.1 2,626,858 - -0.4 2,626,858 - -2.1 2,626,916 + -0.5 2,626,989 + -1.3 2,626,989 + +0.8 2,626,989 + -0.4 2,626,989 + +0.3 2,626,989 + -1.2 2,626,989 + +0.8 2,626,989 + -0.0 2,626,989 + +1.0 2,626,989 + -2.7 2,626,989 + +0.3 2,626,989 + -0.6 2,626,989 + -0.4 2,626,989 + -1.2 2,626,989 + -0.3 2,626,990 - +1.4 2,626,990 - -1.9 2,626,990 - -1.2 2,626,990 - +0.5 2,626,990 - -0.9 2,626,990 - +0.3 2,626,990 - -0.7 2,626,990 - -0.0 2,626,990 - -0.8 2,626,990 - -0.5 2,626,990 - +0.5 2,626,990 - -1.5 2,626,990 - +1.1 2,626,990 - +1.4 2,626,990 - -0.2 2,627,056 + -0.2 2,627,058 + -0.6 2,627,058 + -1.7 2,627,058 + -1.2 2,627,058 + -1.0 2,627,058 + -1.9 2,627,059 - +0.0 2,627,059 - -0.5 2,627,059 - +1.0 2,627,059 - -1.3 2,627,059 - -1.5 2,627,115 + -1.3 2,627,115 + -0.2 2,627,115 + +0.9 2,627,115 + -1.2 2,627,115 + -0.5 2,627,115 + -0.0 2,627,115 + +0.1 2,627,115 + -2.1 2,627,115 + -1.6 2,627,115 + -0.6 2,627,115 + -2.2 2,627,115 + -2.1 2,627,115 + +0.3 2,627,115 + -0.1 2,627,115 + -1.6 2,627,116 - +2.4 2,627,116 - -0.2 2,627,116 - +0.0 2,627,116 - -0.2 2,627,116 - +1.1 2,627,116 - -0.7 2,627,117 + -0.3 2,627,117 + -0.5 2,627,117 + -0.1 2,627,117 + +0.6 2,627,117 + +0.0 2,627,117 + +1.1 2,627,117 + +0.6 2,627,117 + -1.0 2,627,117 + -0.2 2,627,117 + -0.2 2,627,117 + -1.0 2,627,117 + -2.0 2,627,117 + -0.8 2,627,117 + -0.7 2,627,117 + -0.9 2,627,117 + +0.7 2,627,117 + -0.6 2,627,117 + -1.3 2,627,117 + -0.4 2,627,117 + +0.6 2,627,117 + -0.3 2,627,117 + -0.2 2,627,117 + -0.1 2,627,117 + +0.6 2,627,117 + -0.2 2,627,117 + -1.3 2,627,117 + +0.5 2,627,117 + -0.2 2,627,117 + -1.3 2,627,118 - -0.7 2,627,118 - -1.5 2,627,118 - -0.5 2,627,118 - +2.2 2,627,118 - +0.3 2,627,118 - +0.5 2,627,118 - -1.0 2,627,118 - +0.3
Or see this region's nucleotide sequence