Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS11775

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS11760 and SGL_RS11765 are separated by 80 nucleotidesSGL_RS11765 and SGL_RS11770 are separated by 221 nucleotidesSGL_RS11770 and SGL_RS11775 are separated by 47 nucleotidesSGL_RS11775 and SGL_RS11780 are separated by 120 nucleotides SGL_RS11760: SGL_RS11760 - radical SAM protein, at 2,090,026 to 2,091,630 _RS11760 SGL_RS11765: SGL_RS11765 - hypothetical protein, at 2,091,711 to 2,092,178 _RS11765 SGL_RS11770: SGL_RS11770 - tRNA-Asn, at 2,092,400 to 2,092,471 _RS11770 SGL_RS11775: SGL_RS11775 - isoaspartyl peptidase/L-asparaginase, at 2,092,519 to 2,093,508 _RS11775 SGL_RS11780: SGL_RS11780 - adenylosuccinate lyase, at 2,093,629 to 2,094,924 _RS11780 Position (kb) 2092 2093 2094Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2091.601 kb on - strandat 2091.621 kb on - strandat 2091.763 kb on + strand, within SGL_RS11765at 2091.818 kb on - strand, within SGL_RS11765at 2091.863 kb on - strand, within SGL_RS11765at 2091.980 kb on + strand, within SGL_RS11765at 2092.005 kb on + strand, within SGL_RS11765at 2092.013 kb on - strand, within SGL_RS11765at 2092.086 kb on + strand, within SGL_RS11765at 2092.263 kb on + strandat 2092.307 kb on + strandat 2092.659 kb on - strand, within SGL_RS11775at 2092.678 kb on + strand, within SGL_RS11775at 2092.790 kb on - strand, within SGL_RS11775at 2092.833 kb on + strand, within SGL_RS11775at 2092.836 kb on - strand, within SGL_RS11775at 2092.903 kb on + strand, within SGL_RS11775at 2092.918 kb on + strand, within SGL_RS11775at 2092.918 kb on + strand, within SGL_RS11775at 2092.923 kb on + strand, within SGL_RS11775at 2093.433 kb on - strandat 2093.524 kb on + strandat 2093.778 kb on + strand, within SGL_RS11780at 2093.794 kb on + strand, within SGL_RS11780at 2093.794 kb on + strand, within SGL_RS11780at 2093.802 kb on - strand, within SGL_RS11780at 2093.809 kb on + strand, within SGL_RS11780at 2094.068 kb on + strand, within SGL_RS11780at 2094.121 kb on - strand, within SGL_RS11780

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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2,091,601 - -0.5
2,091,621 - -0.1
2,091,763 + SGL_RS11765 0.11 -0.5
2,091,818 - SGL_RS11765 0.23 +0.0
2,091,863 - SGL_RS11765 0.32 +0.2
2,091,980 + SGL_RS11765 0.57 -0.0
2,092,005 + SGL_RS11765 0.63 +0.6
2,092,013 - SGL_RS11765 0.65 +0.6
2,092,086 + SGL_RS11765 0.80 +0.2
2,092,263 + +0.1
2,092,307 + -0.0
2,092,659 - SGL_RS11775 0.14 -4.9
2,092,678 + SGL_RS11775 0.16 -3.7
2,092,790 - SGL_RS11775 0.27 -5.0
2,092,833 + SGL_RS11775 0.32 -2.8
2,092,836 - SGL_RS11775 0.32 -3.2
2,092,903 + SGL_RS11775 0.39 -2.9
2,092,918 + SGL_RS11775 0.40 -3.2
2,092,918 + SGL_RS11775 0.40 -2.2
2,092,923 + SGL_RS11775 0.41 -2.4
2,093,433 - -4.3
2,093,524 + +0.1
2,093,778 + SGL_RS11780 0.11 -0.2
2,093,794 + SGL_RS11780 0.13 -0.6
2,093,794 + SGL_RS11780 0.13 +0.8
2,093,802 - SGL_RS11780 0.13 +0.8
2,093,809 + SGL_RS11780 0.14 -0.2
2,094,068 + SGL_RS11780 0.34 -2.1
2,094,121 - SGL_RS11780 0.38 -1.8

Or see this region's nucleotide sequence