Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02524 and MPMX19_02525 are separated by 14 nucleotides MPMX19_02525 and MPMX19_02526 are separated by 347 nucleotides MPMX19_02526 and MPMX19_02527 are separated by 84 nucleotides MPMX19_02527 and MPMX19_02528 are separated by 116 nucleotides
MPMX19_02524: MPMX19_02524 - tRNA pseudouridine synthase B, at 2,644,186 to 2,645,127
_02524
MPMX19_02525: MPMX19_02525 - 30S ribosomal protein S15, at 2,645,142 to 2,645,411
_02525
MPMX19_02526: MPMX19_02526 - Polyribonucleotide nucleotidyltransferase, at 2,645,759 to 2,647,870
_02526
MPMX19_02527: MPMX19_02527 - hypothetical protein, at 2,647,955 to 2,648,686
_02527
MPMX19_02528: MPMX19_02528 - hypothetical protein, at 2,648,803 to 2,649,240
_02528
Position (kb)
2645
2646
2647
2648 Strain fitness (log2 ratio)
-2
-1
0
1 at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.536 kb on + strand at 2645.545 kb on + strand at 2645.545 kb on + strand at 2645.629 kb on + strand at 2645.629 kb on + strand at 2645.629 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.689 kb on + strand at 2647.962 kb on + strand at 2647.962 kb on + strand at 2647.968 kb on + strand at 2647.968 kb on + strand at 2647.968 kb on + strand at 2647.969 kb on - strand at 2647.969 kb on - strand at 2648.106 kb on - strand, within MPMX19_02527 at 2648.106 kb on - strand, within MPMX19_02527 at 2648.168 kb on + strand, within MPMX19_02527 at 2648.168 kb on + strand, within MPMX19_02527 at 2648.168 kb on + strand, within MPMX19_02527 at 2648.168 kb on + strand, within MPMX19_02527 at 2648.169 kb on - strand, within MPMX19_02527 at 2648.332 kb on + strand, within MPMX19_02527 at 2648.457 kb on - strand, within MPMX19_02527 at 2648.489 kb on - strand, within MPMX19_02527 at 2648.731 kb on + strand at 2648.731 kb on + strand at 2648.731 kb on + strand at 2648.731 kb on + strand at 2648.731 kb on + strand at 2648.731 kb on + strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.732 kb on - strand at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.869 kb on + strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528 at 2648.870 kb on - strand, within MPMX19_02528
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,645,511 + +1.2 2,645,511 + -0.2 2,645,511 + -0.5 2,645,511 + -0.1 2,645,536 + +0.0 2,645,545 + +0.3 2,645,545 + -0.2 2,645,629 + -0.7 2,645,629 + -1.1 2,645,629 + -0.2 2,645,664 + +0.6 2,645,664 + -0.4 2,645,664 + -0.7 2,645,664 + +0.4 2,645,664 + -1.7 2,645,664 + -0.0 2,645,664 + +0.3 2,645,664 + +0.0 2,645,664 + -0.6 2,645,689 + +1.2 2,647,962 + +0.3 2,647,962 + -1.0 2,647,968 + -1.4 2,647,968 + -0.4 2,647,968 + +0.3 2,647,969 - -1.0 2,647,969 - -0.8 2,648,106 - MPMX19_02527 0.21 -1.1 2,648,106 - MPMX19_02527 0.21 -0.6 2,648,168 + MPMX19_02527 0.29 -1.0 2,648,168 + MPMX19_02527 0.29 -0.4 2,648,168 + MPMX19_02527 0.29 -0.4 2,648,168 + MPMX19_02527 0.29 -0.1 2,648,169 - MPMX19_02527 0.29 -1.0 2,648,332 + MPMX19_02527 0.52 -2.2 2,648,457 - MPMX19_02527 0.69 +0.6 2,648,489 - MPMX19_02527 0.73 +1.5 2,648,731 + +0.4 2,648,731 + +0.4 2,648,731 + +1.1 2,648,731 + -0.4 2,648,731 + +0.6 2,648,731 + -0.1 2,648,732 - -0.7 2,648,732 - +0.6 2,648,732 - -0.1 2,648,732 - -0.1 2,648,732 - -0.7 2,648,732 - -0.5 2,648,732 - +1.0 2,648,869 + MPMX19_02528 0.15 +0.9 2,648,869 + MPMX19_02528 0.15 -0.7 2,648,869 + MPMX19_02528 0.15 +0.5 2,648,869 + MPMX19_02528 0.15 +0.1 2,648,869 + MPMX19_02528 0.15 +0.1 2,648,869 + MPMX19_02528 0.15 -1.1 2,648,869 + MPMX19_02528 0.15 +1.3 2,648,869 + MPMX19_02528 0.15 -0.2 2,648,869 + MPMX19_02528 0.15 -0.3 2,648,869 + MPMX19_02528 0.15 +0.6 2,648,869 + MPMX19_02528 0.15 +1.5 2,648,869 + MPMX19_02528 0.15 -0.4 2,648,869 + MPMX19_02528 0.15 +0.7 2,648,869 + MPMX19_02528 0.15 -0.9 2,648,869 + MPMX19_02528 0.15 +0.9 2,648,869 + MPMX19_02528 0.15 -0.7 2,648,869 + MPMX19_02528 0.15 -1.4 2,648,869 + MPMX19_02528 0.15 -0.8 2,648,869 + MPMX19_02528 0.15 +0.4 2,648,869 + MPMX19_02528 0.15 +0.9 2,648,869 + MPMX19_02528 0.15 -0.7 2,648,870 - MPMX19_02528 0.15 +0.7 2,648,870 - MPMX19_02528 0.15 -0.7 2,648,870 - MPMX19_02528 0.15 -1.8 2,648,870 - MPMX19_02528 0.15 -0.7 2,648,870 - MPMX19_02528 0.15 -1.9 2,648,870 - MPMX19_02528 0.15 +0.1 2,648,870 - MPMX19_02528 0.15 -0.1 2,648,870 - MPMX19_02528 0.15 -1.2 2,648,870 - MPMX19_02528 0.15 -0.9 2,648,870 - MPMX19_02528 0.15 -1.0 2,648,870 - MPMX19_02528 0.15 -0.5 2,648,870 - MPMX19_02528 0.15 -0.4 2,648,870 - MPMX19_02528 0.15 -0.6 2,648,870 - MPMX19_02528 0.15 -0.4 2,648,870 - MPMX19_02528 0.15 +0.7 2,648,870 - MPMX19_02528 0.15 -0.4 2,648,870 - MPMX19_02528 0.15 +0.0 2,648,870 - MPMX19_02528 0.15 -1.7
Or see this region's nucleotide sequence