Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01730 and MPMX19_01731 overlap by 4 nucleotides MPMX19_01731 and MPMX19_01732 are separated by 46 nucleotides MPMX19_01732 and MPMX19_01733 are separated by 10 nucleotides
MPMX19_01730: MPMX19_01730 - Ribonuclease J1, at 1,820,656 to 1,822,371
_01730
MPMX19_01731: MPMX19_01731 - Type III pantothenate kinase, at 1,822,368 to 1,823,141
_01731
MPMX19_01732: MPMX19_01732 - Bifunctional ligase/repressor BirA, at 1,823,188 to 1,824,000
_01732
MPMX19_01733: MPMX19_01733 - NADH-quinone oxidoreductase subunit N, at 1,824,011 to 1,825,459
_01733
Position (kb)
1823
1824
1825 Strain fitness (log2 ratio)
-2
-1
0
1 at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.241 kb on + strand at 1822.242 kb on - strand at 1822.242 kb on - strand at 1822.242 kb on - strand at 1822.242 kb on - strand at 1822.242 kb on - strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.292 kb on + strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand at 1822.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,822,241 + -1.5 1,822,241 + +0.3 1,822,241 + +0.1 1,822,241 + -1.6 1,822,241 + -0.0 1,822,241 + +0.2 1,822,241 + -0.1 1,822,241 + -0.8 1,822,241 + -0.7 1,822,242 - +0.5 1,822,242 - -0.3 1,822,242 - +0.1 1,822,242 - +0.1 1,822,242 - +0.7 1,822,292 + -1.1 1,822,292 + +0.2 1,822,292 + -0.1 1,822,292 + -0.7 1,822,292 + -0.8 1,822,292 + -2.1 1,822,292 + -0.8 1,822,292 + -0.7 1,822,292 + -1.5 1,822,292 + +0.9 1,822,292 + -0.0 1,822,292 + -0.5 1,822,292 + -1.7 1,822,293 - -0.8 1,822,293 - -1.1 1,822,293 - -0.3 1,822,293 - -1.3 1,822,293 - +0.1 1,822,293 - -0.5 1,822,293 - +1.3 1,822,293 - -0.7 1,822,293 - +0.9 1,822,293 - -2.0 1,822,293 - -0.9 1,822,293 - -0.7 1,822,293 - -0.5 1,822,293 - +1.0 1,822,293 - -1.0
Or see this region's nucleotide sequence