Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01554 and MPMX19_01555 are separated by 294 nucleotides MPMX19_01555 and MPMX19_01556 are separated by 871 nucleotides
MPMX19_01554: MPMX19_01554 - Nitrogen regulatory protein P-II, at 1,629,442 to 1,629,780
_01554
MPMX19_01555: MPMX19_01555 - 3-hydroxylaminophenol mutase, at 1,630,075 to 1,631,484
_01555
MPMX19_01556: MPMX19_01556 - hypothetical protein, at 1,632,356 to 1,632,796
_01556
Position (kb)
1630
1631
1632 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1629.252 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.315 kb on + strand at 1629.372 kb on + strand at 1629.372 kb on + strand at 1629.372 kb on + strand at 1629.372 kb on + strand at 1629.372 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.428 kb on + strand at 1629.911 kb on + strand at 1629.911 kb on + strand at 1629.911 kb on + strand at 1629.912 kb on - strand at 1629.969 kb on + strand at 1629.969 kb on + strand at 1629.969 kb on + strand at 1629.969 kb on + strand at 1630.011 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1630.055 kb on + strand at 1631.552 kb on - strand at 1631.812 kb on - strand at 1631.812 kb on - strand at 1631.818 kb on + strand at 1631.819 kb on - strand at 1631.844 kb on - strand at 1631.855 kb on + strand at 1631.855 kb on + strand at 1631.856 kb on - strand at 1631.875 kb on - strand at 1631.911 kb on + strand at 1631.912 kb on - strand at 1631.912 kb on - strand at 1631.912 kb on - strand at 1632.013 kb on + strand at 1632.014 kb on - strand at 1632.027 kb on - strand at 1632.034 kb on - strand at 1632.034 kb on - strand at 1632.035 kb on + strand at 1632.035 kb on + strand at 1632.043 kb on + strand at 1632.099 kb on + strand at 1632.113 kb on + strand at 1632.113 kb on + strand at 1632.114 kb on - strand at 1632.170 kb on + strand at 1632.171 kb on - strand at 1632.171 kb on - strand at 1632.185 kb on + strand at 1632.185 kb on + strand at 1632.185 kb on + strand at 1632.185 kb on + strand at 1632.185 kb on + strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.186 kb on - strand at 1632.228 kb on + strand at 1632.228 kb on + strand at 1632.229 kb on - strand at 1632.229 kb on - strand at 1632.229 kb on - strand at 1632.229 kb on - strand at 1632.229 kb on - strand at 1632.229 kb on - strand at 1632.242 kb on + strand at 1632.242 kb on + strand at 1632.242 kb on + strand at 1632.242 kb on + strand at 1632.243 kb on - strand at 1632.243 kb on - strand at 1632.283 kb on + strand at 1632.284 kb on - strand at 1632.284 kb on - strand at 1632.284 kb on - strand at 1632.284 kb on - strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.365 kb on + strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.366 kb on - strand at 1632.404 kb on + strand, within MPMX19_01556 at 1632.454 kb on + strand, within MPMX19_01556 at 1632.454 kb on + strand, within MPMX19_01556 at 1632.454 kb on + strand, within MPMX19_01556 at 1632.455 kb on - strand, within MPMX19_01556 at 1632.455 kb on - strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.458 kb on + strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556 at 1632.459 kb on - strand, within MPMX19_01556
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,629,252 + +0.4 1,629,315 + +0.9 1,629,315 + -0.2 1,629,315 + +0.1 1,629,315 + -0.6 1,629,315 + -0.7 1,629,315 + +0.4 1,629,315 + +0.1 1,629,315 + +0.6 1,629,315 + -0.1 1,629,315 + +0.1 1,629,315 + +1.1 1,629,315 + -0.3 1,629,372 + -1.4 1,629,372 + +0.5 1,629,372 + -1.4 1,629,372 + -2.1 1,629,372 + -0.3 1,629,428 + -0.9 1,629,428 + -0.4 1,629,428 + +1.7 1,629,428 + -0.6 1,629,428 + -1.0 1,629,428 + -2.4 1,629,428 + -0.1 1,629,428 + +0.1 1,629,428 + -2.0 1,629,428 + -1.1 1,629,911 + -0.4 1,629,911 + +1.0 1,629,911 + -1.6 1,629,912 - -1.4 1,629,969 + +1.2 1,629,969 + -0.2 1,629,969 + +0.6 1,629,969 + -0.5 1,630,011 + -0.7 1,630,055 + -0.7 1,630,055 + -0.0 1,630,055 + -0.8 1,630,055 + -2.0 1,630,055 + +0.7 1,630,055 + -0.8 1,630,055 + -0.0 1,630,055 + +0.1 1,630,055 + -0.6 1,630,055 + -1.2 1,630,055 + +1.3 1,630,055 + +1.2 1,631,552 - -0.7 1,631,812 - +0.3 1,631,812 - -2.1 1,631,818 + -1.4 1,631,819 - -0.9 1,631,844 - -1.3 1,631,855 + +0.4 1,631,855 + +0.7 1,631,856 - -0.9 1,631,875 - -1.1 1,631,911 + -1.4 1,631,912 - -0.1 1,631,912 - +0.5 1,631,912 - -0.0 1,632,013 + +1.4 1,632,014 - -1.6 1,632,027 - -0.7 1,632,034 - -1.0 1,632,034 - +0.4 1,632,035 + +1.0 1,632,035 + -0.3 1,632,043 + -0.4 1,632,099 + -1.7 1,632,113 + -1.2 1,632,113 + -0.3 1,632,114 - -0.6 1,632,170 + +0.1 1,632,171 - +0.5 1,632,171 - -1.3 1,632,185 + +1.7 1,632,185 + -0.4 1,632,185 + -1.6 1,632,185 + -0.3 1,632,185 + -1.3 1,632,186 - +0.1 1,632,186 - -0.6 1,632,186 - +1.1 1,632,186 - +0.3 1,632,186 - +0.3 1,632,186 - -2.4 1,632,186 - +1.7 1,632,228 + -1.4 1,632,228 + -0.0 1,632,229 - -0.6 1,632,229 - +0.2 1,632,229 - -0.9 1,632,229 - +0.9 1,632,229 - -0.8 1,632,229 - -0.4 1,632,242 + +0.6 1,632,242 + -0.0 1,632,242 + -1.2 1,632,242 + +0.2 1,632,243 - +0.3 1,632,243 - -1.8 1,632,283 + -0.4 1,632,284 - +0.6 1,632,284 - +1.3 1,632,284 - -0.7 1,632,284 - +1.3 1,632,365 + -1.3 1,632,365 + +0.6 1,632,365 + +0.6 1,632,365 + -0.1 1,632,365 + +0.1 1,632,365 + -1.4 1,632,365 + -0.2 1,632,365 + +0.1 1,632,365 + -0.3 1,632,365 + -0.6 1,632,365 + -0.7 1,632,365 + -1.3 1,632,365 + -0.3 1,632,365 + -0.2 1,632,365 + +0.1 1,632,365 + -0.5 1,632,365 + -2.1 1,632,365 + +0.2 1,632,365 + -0.8 1,632,365 + -0.8 1,632,366 - -1.3 1,632,366 - -1.7 1,632,366 - -0.9 1,632,366 - +1.1 1,632,366 - +1.1 1,632,366 - +0.7 1,632,366 - -3.2 1,632,366 - -1.1 1,632,366 - +0.2 1,632,366 - -0.1 1,632,366 - -0.7 1,632,366 - -0.1 1,632,404 + MPMX19_01556 0.11 -1.0 1,632,454 + MPMX19_01556 0.22 +0.0 1,632,454 + MPMX19_01556 0.22 -1.0 1,632,454 + MPMX19_01556 0.22 -1.3 1,632,455 - MPMX19_01556 0.22 +0.1 1,632,455 - MPMX19_01556 0.22 +0.6 1,632,458 + MPMX19_01556 0.23 +0.3 1,632,458 + MPMX19_01556 0.23 -0.6 1,632,458 + MPMX19_01556 0.23 -1.3 1,632,458 + MPMX19_01556 0.23 -1.1 1,632,458 + MPMX19_01556 0.23 -0.2 1,632,458 + MPMX19_01556 0.23 +0.2 1,632,458 + MPMX19_01556 0.23 -0.3 1,632,458 + MPMX19_01556 0.23 -0.6 1,632,458 + MPMX19_01556 0.23 +1.2 1,632,459 - MPMX19_01556 0.23 -1.3 1,632,459 - MPMX19_01556 0.23 -0.6 1,632,459 - MPMX19_01556 0.23 +1.7 1,632,459 - MPMX19_01556 0.23 -0.7 1,632,459 - MPMX19_01556 0.23 -0.2 1,632,459 - MPMX19_01556 0.23 -0.7 1,632,459 - MPMX19_01556 0.23 +1.2
Or see this region's nucleotide sequence