Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00627 and MPMX19_00628 are separated by 5 nucleotides MPMX19_00628 and MPMX19_00629 are separated by 19 nucleotides MPMX19_00629 and MPMX19_00630 are separated by 156 nucleotides MPMX19_00630 and MPMX19_00631 are separated by 171 nucleotides
MPMX19_00627: MPMX19_00627 - hypothetical protein, at 644,966 to 646,153
_00627
MPMX19_00628: MPMX19_00628 - hypothetical protein, at 646,159 to 646,611
_00628
MPMX19_00629: MPMX19_00629 - hypothetical protein, at 646,631 to 646,771
_00629
MPMX19_00630: MPMX19_00630 - hypothetical protein, at 646,928 to 648,427
_00630
MPMX19_00631: MPMX19_00631 - putative MFS-type transporter, at 648,599 to 649,861
_00631
Position (kb) 646
647
648
649 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 645.992 kb on - strand, within MPMX19_00627 at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.128 kb on + strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.129 kb on - strand at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.647 kb on + strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.648 kb on - strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.734 kb on + strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.735 kb on - strand, within MPMX19_00629 at 646.992 kb on + strand at 647.121 kb on + strand, within MPMX19_00630 at 647.121 kb on + strand, within MPMX19_00630 at 647.122 kb on - strand, within MPMX19_00630 at 647.122 kb on - strand, within MPMX19_00630 at 647.122 kb on - strand, within MPMX19_00630 at 647.122 kb on - strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.472 kb on + strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.473 kb on - strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.538 kb on + strand, within MPMX19_00630 at 647.539 kb on - strand, within MPMX19_00630 at 647.539 kb on - strand, within MPMX19_00630 at 647.539 kb on - strand, within MPMX19_00630 at 647.539 kb on - strand, within MPMX19_00630 at 647.539 kb on - strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.757 kb on + strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 647.758 kb on - strand, within MPMX19_00630 at 648.453 kb on + strand at 648.453 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.596 kb on + strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.597 kb on - strand at 648.671 kb on + strand at 648.672 kb on - strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.683 kb on + strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.800 kb on + strand, within MPMX19_00631 at 648.800 kb on + strand, within MPMX19_00631 at 648.801 kb on - strand, within MPMX19_00631 at 648.801 kb on - strand, within MPMX19_00631 at 648.801 kb on - strand, within MPMX19_00631 at 648.801 kb on - strand, within MPMX19_00631 at 648.801 kb on - strand, within MPMX19_00631 at 648.813 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.058 kb on + strand, within MPMX19_00631 at 649.059 kb on - strand, within MPMX19_00631 at 649.059 kb on - strand, within MPMX19_00631 at 649.059 kb on - strand, within MPMX19_00631
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 645,992 - MPMX19_00627 0.86 -0.8 646,128 + -0.9 646,128 + +0.1 646,128 + -0.6 646,128 + +0.7 646,128 + -1.7 646,128 + -1.4 646,128 + -1.3 646,128 + -0.4 646,129 - +1.2 646,129 - -0.5 646,129 - -1.6 646,129 - +1.1 646,129 - -0.5 646,129 - -0.7 646,129 - +0.0 646,129 - -0.6 646,647 + MPMX19_00629 0.11 -1.0 646,647 + MPMX19_00629 0.11 -0.0 646,647 + MPMX19_00629 0.11 -0.6 646,647 + MPMX19_00629 0.11 -2.5 646,647 + MPMX19_00629 0.11 +0.5 646,647 + MPMX19_00629 0.11 -0.3 646,647 + MPMX19_00629 0.11 -0.5 646,647 + MPMX19_00629 0.11 -0.5 646,647 + MPMX19_00629 0.11 -0.2 646,647 + MPMX19_00629 0.11 +0.2 646,648 - MPMX19_00629 0.12 +0.2 646,648 - MPMX19_00629 0.12 -2.2 646,648 - MPMX19_00629 0.12 -0.2 646,648 - MPMX19_00629 0.12 +0.1 646,648 - MPMX19_00629 0.12 -0.9 646,648 - MPMX19_00629 0.12 -0.1 646,648 - MPMX19_00629 0.12 +1.3 646,648 - MPMX19_00629 0.12 -1.2 646,648 - MPMX19_00629 0.12 -1.3 646,648 - MPMX19_00629 0.12 +0.1 646,648 - MPMX19_00629 0.12 -0.2 646,648 - MPMX19_00629 0.12 -0.1 646,734 + MPMX19_00629 0.73 +0.0 646,734 + MPMX19_00629 0.73 +1.1 646,734 + MPMX19_00629 0.73 -1.1 646,734 + MPMX19_00629 0.73 -0.5 646,734 + MPMX19_00629 0.73 -1.2 646,734 + MPMX19_00629 0.73 +0.0 646,734 + MPMX19_00629 0.73 +0.0 646,734 + MPMX19_00629 0.73 +0.4 646,734 + MPMX19_00629 0.73 -1.1 646,734 + MPMX19_00629 0.73 +0.3 646,734 + MPMX19_00629 0.73 +1.0 646,735 - MPMX19_00629 0.74 -0.5 646,735 - MPMX19_00629 0.74 -1.4 646,735 - MPMX19_00629 0.74 +0.0 646,735 - MPMX19_00629 0.74 -0.6 646,735 - MPMX19_00629 0.74 +0.7 646,735 - MPMX19_00629 0.74 -0.5 646,735 - MPMX19_00629 0.74 -0.6 646,735 - MPMX19_00629 0.74 -2.0 646,735 - MPMX19_00629 0.74 +0.5 646,735 - MPMX19_00629 0.74 -0.0 646,735 - MPMX19_00629 0.74 -0.7 646,735 - MPMX19_00629 0.74 -0.0 646,735 - MPMX19_00629 0.74 -0.6 646,735 - MPMX19_00629 0.74 +1.7 646,735 - MPMX19_00629 0.74 -0.6 646,992 + -0.4 647,121 + MPMX19_00630 0.13 -0.6 647,121 + MPMX19_00630 0.13 -1.9 647,122 - MPMX19_00630 0.13 +0.3 647,122 - MPMX19_00630 0.13 +0.1 647,122 - MPMX19_00630 0.13 -0.9 647,122 - MPMX19_00630 0.13 +0.1 647,472 + MPMX19_00630 0.36 +0.6 647,472 + MPMX19_00630 0.36 -0.8 647,472 + MPMX19_00630 0.36 -0.1 647,472 + MPMX19_00630 0.36 -1.2 647,472 + MPMX19_00630 0.36 -1.7 647,472 + MPMX19_00630 0.36 -1.0 647,472 + MPMX19_00630 0.36 -2.3 647,473 - MPMX19_00630 0.36 -0.2 647,473 - MPMX19_00630 0.36 -1.1 647,473 - MPMX19_00630 0.36 -1.5 647,473 - MPMX19_00630 0.36 -0.6 647,473 - MPMX19_00630 0.36 -0.6 647,473 - MPMX19_00630 0.36 -0.1 647,538 + MPMX19_00630 0.41 -0.2 647,538 + MPMX19_00630 0.41 +0.4 647,538 + MPMX19_00630 0.41 +0.2 647,538 + MPMX19_00630 0.41 +1.0 647,538 + MPMX19_00630 0.41 -1.0 647,538 + MPMX19_00630 0.41 -0.7 647,538 + MPMX19_00630 0.41 -0.8 647,538 + MPMX19_00630 0.41 -0.6 647,538 + MPMX19_00630 0.41 +0.0 647,539 - MPMX19_00630 0.41 -0.9 647,539 - MPMX19_00630 0.41 -0.1 647,539 - MPMX19_00630 0.41 -0.6 647,539 - MPMX19_00630 0.41 -1.7 647,539 - MPMX19_00630 0.41 +0.2 647,757 + MPMX19_00630 0.55 +1.1 647,757 + MPMX19_00630 0.55 -0.2 647,757 + MPMX19_00630 0.55 +0.1 647,757 + MPMX19_00630 0.55 +0.7 647,757 + MPMX19_00630 0.55 +0.7 647,757 + MPMX19_00630 0.55 +0.4 647,757 + MPMX19_00630 0.55 -0.5 647,757 + MPMX19_00630 0.55 -0.7 647,757 + MPMX19_00630 0.55 +0.9 647,757 + MPMX19_00630 0.55 +0.0 647,758 - MPMX19_00630 0.55 -1.8 647,758 - MPMX19_00630 0.55 +0.9 647,758 - MPMX19_00630 0.55 -2.3 647,758 - MPMX19_00630 0.55 -0.4 647,758 - MPMX19_00630 0.55 +0.9 647,758 - MPMX19_00630 0.55 -0.1 647,758 - MPMX19_00630 0.55 -0.6 647,758 - MPMX19_00630 0.55 -0.3 647,758 - MPMX19_00630 0.55 -0.0 647,758 - MPMX19_00630 0.55 +0.1 648,453 + -0.1 648,453 + -0.2 648,596 + -1.1 648,596 + -0.5 648,596 + -1.5 648,596 + -0.2 648,596 + +0.3 648,596 + -1.3 648,596 + -0.4 648,596 + -1.7 648,596 + -0.3 648,596 + -1.7 648,596 + +0.2 648,596 + -1.5 648,596 + +0.1 648,596 + -0.1 648,596 + -0.6 648,596 + -0.1 648,596 + -1.3 648,596 + -1.1 648,596 + -1.1 648,596 + -0.0 648,596 + +0.1 648,596 + +0.9 648,596 + -1.2 648,596 + -0.4 648,597 - -0.5 648,597 - -0.4 648,597 - -0.5 648,597 - +1.2 648,597 - -0.1 648,597 - -0.0 648,597 - -0.2 648,597 - -1.2 648,597 - -1.3 648,597 - -0.7 648,597 - +0.1 648,597 - -0.9 648,597 - -0.7 648,597 - -0.3 648,597 - +0.7 648,597 - -0.3 648,671 + +1.2 648,672 - +1.3 648,683 + -0.9 648,683 + -0.1 648,683 + -0.9 648,683 + -1.1 648,683 + -0.4 648,683 + -1.1 648,683 + -0.6 648,683 + +0.3 648,683 + -1.6 648,683 + -1.1 648,683 + -2.8 648,683 + -0.8 648,684 - -2.1 648,684 - +1.1 648,684 - +0.3 648,684 - -0.3 648,684 - -1.1 648,684 - -0.5 648,684 - +0.3 648,684 - -0.8 648,684 - +0.1 648,684 - -0.6 648,684 - -0.7 648,684 - +0.3 648,684 - -0.5 648,684 - -0.3 648,684 - -1.0 648,800 + MPMX19_00631 0.16 +1.7 648,800 + MPMX19_00631 0.16 -1.5 648,801 - MPMX19_00631 0.16 -1.0 648,801 - MPMX19_00631 0.16 +0.1 648,801 - MPMX19_00631 0.16 -0.3 648,801 - MPMX19_00631 0.16 -0.0 648,801 - MPMX19_00631 0.16 +0.2 648,813 + MPMX19_00631 0.17 -0.1 649,058 + MPMX19_00631 0.36 -1.1 649,058 + MPMX19_00631 0.36 -0.5 649,058 + MPMX19_00631 0.36 +0.5 649,058 + MPMX19_00631 0.36 -1.3 649,058 + MPMX19_00631 0.36 -0.9 649,058 + MPMX19_00631 0.36 -2.2 649,058 + MPMX19_00631 0.36 +0.7 649,058 + MPMX19_00631 0.36 -0.3 649,058 + MPMX19_00631 0.36 +0.3 649,059 - MPMX19_00631 0.36 -0.1 649,059 - MPMX19_00631 0.36 +0.5 649,059 - MPMX19_00631 0.36 -0.1
Or see this region's nucleotide sequence