Experiment: growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09430 and SGL_RS09435 are separated by 51 nucleotides SGL_RS09435 and SGL_RS09440 are separated by 202 nucleotides SGL_RS09440 and SGL_RS09445 are separated by 53 nucleotides SGL_RS09445 and SGL_RS09450 overlap by 4 nucleotides SGL_RS09450 and SGL_RS09455 are separated by 224 nucleotides
SGL_RS09430: SGL_RS09430 - leucyl aminopeptidase, at 1,618,127 to 1,619,710
_RS09430
SGL_RS09435: SGL_RS09435 - tRNA-Phe, at 1,619,762 to 1,619,834
_RS09435
SGL_RS09440: SGL_RS09440 - hypothetical protein, at 1,620,037 to 1,620,222
_RS09440
SGL_RS09445: SGL_RS09445 - type II toxin-antitoxin system Phd/YefM family antitoxin, at 1,620,276 to 1,620,539
_RS09445
SGL_RS09450: SGL_RS09450 - Txe/YoeB family addiction module toxin, at 1,620,536 to 1,620,796
_RS09450
SGL_RS09455: SGL_RS09455 - ABC transporter permease, at 1,621,021 to 1,621,881
_RS09455
Position (kb)
1620
1621 Strain fitness (log2 ratio)
-1
0
1 at 1619.118 kb on - strand, within SGL_RS09430 at 1619.200 kb on - strand, within SGL_RS09430 at 1619.341 kb on - strand, within SGL_RS09430 at 1619.342 kb on - strand, within SGL_RS09430 at 1619.410 kb on + strand, within SGL_RS09430 at 1619.443 kb on - strand, within SGL_RS09430 at 1619.556 kb on - strand at 1619.578 kb on - strand at 1619.635 kb on - strand at 1619.665 kb on - strand at 1619.849 kb on + strand at 1619.872 kb on + strand at 1619.991 kb on - strand at 1620.180 kb on + strand, within SGL_RS09440 at 1620.358 kb on + strand, within SGL_RS09445 at 1620.358 kb on + strand, within SGL_RS09445 at 1620.366 kb on - strand, within SGL_RS09445 at 1620.412 kb on - strand, within SGL_RS09445 at 1620.735 kb on - strand, within SGL_RS09450 at 1620.774 kb on + strand at 1620.947 kb on + strand at 1620.969 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 2mM sodum metaarsenite but diluted to prevent light attenuation remove 1,619,118 - SGL_RS09430 0.63 +0.1 1,619,200 - SGL_RS09430 0.68 -0.4 1,619,341 - SGL_RS09430 0.77 -0.5 1,619,342 - SGL_RS09430 0.77 -0.4 1,619,410 + SGL_RS09430 0.81 +0.1 1,619,443 - SGL_RS09430 0.83 -0.6 1,619,556 - +0.1 1,619,578 - +0.0 1,619,635 - -0.3 1,619,665 - +0.2 1,619,849 + +0.2 1,619,872 + -0.0 1,619,991 - +0.0 1,620,180 + SGL_RS09440 0.77 +0.4 1,620,358 + SGL_RS09445 0.31 -0.1 1,620,358 + SGL_RS09445 0.31 -0.0 1,620,366 - SGL_RS09445 0.34 -0.2 1,620,412 - SGL_RS09445 0.52 +0.2 1,620,735 - SGL_RS09450 0.76 -0.3 1,620,774 + -0.0 1,620,947 + -0.1 1,620,969 - -0.1
Or see this region's nucleotide sequence