Experiment: growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16430 and SGL_RS16435 are separated by 46 nucleotides SGL_RS16435 and SGL_RS16440 are separated by 21 nucleotides SGL_RS16440 and SGL_RS16445 are separated by 312 nucleotides
SGL_RS16430: SGL_RS16430 - molybdate ABC transporter permease subunit, at 3,133,291 to 3,135,138
_RS16430
SGL_RS16435: SGL_RS16435 - molybdate ABC transporter substrate-binding protein, at 3,135,185 to 3,135,997
_RS16435
SGL_RS16440: SGL_RS16440 - O-antigen ligase family protein, at 3,136,019 to 3,138,604
_RS16440
SGL_RS16445: SGL_RS16445 - diguanylate cyclase, at 3,138,917 to 3,139,855
_RS16445
Position (kb)
3136
3137
3138
3139 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3135.128 kb on - strand at 3135.128 kb on - strand at 3135.131 kb on + strand at 3135.158 kb on + strand at 3135.158 kb on - strand at 3135.226 kb on + strand at 3135.285 kb on - strand, within SGL_RS16435 at 3135.344 kb on - strand, within SGL_RS16435 at 3135.422 kb on + strand, within SGL_RS16435 at 3135.430 kb on - strand, within SGL_RS16435 at 3135.454 kb on - strand, within SGL_RS16435 at 3135.505 kb on - strand, within SGL_RS16435 at 3135.509 kb on + strand, within SGL_RS16435 at 3135.522 kb on - strand, within SGL_RS16435 at 3135.526 kb on + strand, within SGL_RS16435 at 3135.719 kb on - strand, within SGL_RS16435 at 3135.735 kb on - strand, within SGL_RS16435 at 3135.735 kb on - strand, within SGL_RS16435 at 3135.757 kb on + strand, within SGL_RS16435 at 3135.757 kb on - strand, within SGL_RS16435 at 3136.121 kb on + strand at 3136.164 kb on + strand at 3136.173 kb on - strand at 3136.189 kb on + strand at 3136.195 kb on + strand at 3136.279 kb on - strand, within SGL_RS16440 at 3136.281 kb on + strand, within SGL_RS16440 at 3136.331 kb on - strand, within SGL_RS16440 at 3136.335 kb on + strand, within SGL_RS16440 at 3136.363 kb on - strand, within SGL_RS16440 at 3136.363 kb on - strand, within SGL_RS16440 at 3136.675 kb on - strand, within SGL_RS16440 at 3136.765 kb on + strand, within SGL_RS16440 at 3136.765 kb on + strand, within SGL_RS16440 at 3136.773 kb on - strand, within SGL_RS16440 at 3136.778 kb on - strand, within SGL_RS16440 at 3136.863 kb on - strand, within SGL_RS16440 at 3136.888 kb on - strand, within SGL_RS16440 at 3136.913 kb on + strand, within SGL_RS16440 at 3136.913 kb on + strand, within SGL_RS16440 at 3136.913 kb on + strand, within SGL_RS16440 at 3136.921 kb on - strand, within SGL_RS16440 at 3136.957 kb on + strand, within SGL_RS16440 at 3136.957 kb on + strand, within SGL_RS16440 at 3136.978 kb on + strand, within SGL_RS16440 at 3137.011 kb on - strand, within SGL_RS16440 at 3137.014 kb on + strand, within SGL_RS16440 at 3137.032 kb on - strand, within SGL_RS16440 at 3137.506 kb on + strand, within SGL_RS16440 at 3137.553 kb on + strand, within SGL_RS16440 at 3137.561 kb on - strand, within SGL_RS16440 at 3137.610 kb on + strand, within SGL_RS16440 at 3137.629 kb on - strand, within SGL_RS16440 at 3137.691 kb on + strand, within SGL_RS16440 at 3137.773 kb on + strand, within SGL_RS16440 at 3137.781 kb on - strand, within SGL_RS16440 at 3137.809 kb on + strand, within SGL_RS16440 at 3137.817 kb on - strand, within SGL_RS16440 at 3137.849 kb on + strand, within SGL_RS16440 at 3138.007 kb on + strand, within SGL_RS16440 at 3138.073 kb on - strand, within SGL_RS16440 at 3138.226 kb on + strand, within SGL_RS16440 at 3138.312 kb on - strand, within SGL_RS16440 at 3138.358 kb on - strand at 3138.402 kb on + strand at 3138.446 kb on + strand at 3138.497 kb on - strand at 3138.500 kb on + strand at 3138.506 kb on + strand at 3138.506 kb on + strand at 3138.506 kb on + strand at 3138.514 kb on - strand at 3138.663 kb on - strand at 3138.814 kb on + strand at 3138.825 kb on + strand at 3138.885 kb on + strand at 3138.887 kb on - strand at 3138.890 kb on + strand at 3138.914 kb on + strand at 3138.935 kb on - strand at 3138.949 kb on + strand at 3139.020 kb on - strand, within SGL_RS16445 at 3139.037 kb on - strand, within SGL_RS16445 at 3139.057 kb on + strand, within SGL_RS16445 at 3139.095 kb on - strand, within SGL_RS16445 at 3139.104 kb on + strand, within SGL_RS16445 at 3139.236 kb on + strand, within SGL_RS16445 at 3139.425 kb on + strand, within SGL_RS16445 at 3139.438 kb on - strand, within SGL_RS16445 at 3139.443 kb on - strand, within SGL_RS16445
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 but diluted to prevent light attenuation remove 3,135,128 - -0.3 3,135,128 - +0.0 3,135,131 + +0.6 3,135,158 + -0.0 3,135,158 - +0.5 3,135,226 + -0.7 3,135,285 - SGL_RS16435 0.12 +0.1 3,135,344 - SGL_RS16435 0.20 -1.0 3,135,422 + SGL_RS16435 0.29 +0.5 3,135,430 - SGL_RS16435 0.30 -0.3 3,135,454 - SGL_RS16435 0.33 +0.2 3,135,505 - SGL_RS16435 0.39 -0.0 3,135,509 + SGL_RS16435 0.40 -0.1 3,135,522 - SGL_RS16435 0.41 +0.5 3,135,526 + SGL_RS16435 0.42 -0.5 3,135,719 - SGL_RS16435 0.66 -0.0 3,135,735 - SGL_RS16435 0.68 +0.4 3,135,735 - SGL_RS16435 0.68 +1.8 3,135,757 + SGL_RS16435 0.70 -0.2 3,135,757 - SGL_RS16435 0.70 -3.0 3,136,121 + +0.9 3,136,164 + +0.4 3,136,173 - +0.7 3,136,189 + +0.5 3,136,195 + +1.2 3,136,279 - SGL_RS16440 0.10 -0.5 3,136,281 + SGL_RS16440 0.10 +0.5 3,136,331 - SGL_RS16440 0.12 +1.2 3,136,335 + SGL_RS16440 0.12 +1.1 3,136,363 - SGL_RS16440 0.13 +0.3 3,136,363 - SGL_RS16440 0.13 +0.9 3,136,675 - SGL_RS16440 0.25 +0.6 3,136,765 + SGL_RS16440 0.29 +1.5 3,136,765 + SGL_RS16440 0.29 +0.2 3,136,773 - SGL_RS16440 0.29 +1.0 3,136,778 - SGL_RS16440 0.29 +0.0 3,136,863 - SGL_RS16440 0.33 +0.8 3,136,888 - SGL_RS16440 0.34 +0.0 3,136,913 + SGL_RS16440 0.35 +0.8 3,136,913 + SGL_RS16440 0.35 +1.4 3,136,913 + SGL_RS16440 0.35 +0.1 3,136,921 - SGL_RS16440 0.35 +0.7 3,136,957 + SGL_RS16440 0.36 +1.4 3,136,957 + SGL_RS16440 0.36 +0.7 3,136,978 + SGL_RS16440 0.37 +0.9 3,137,011 - SGL_RS16440 0.38 +0.6 3,137,014 + SGL_RS16440 0.38 +0.8 3,137,032 - SGL_RS16440 0.39 +0.4 3,137,506 + SGL_RS16440 0.58 +0.7 3,137,553 + SGL_RS16440 0.59 +1.0 3,137,561 - SGL_RS16440 0.60 +1.7 3,137,610 + SGL_RS16440 0.62 +0.8 3,137,629 - SGL_RS16440 0.62 +0.8 3,137,691 + SGL_RS16440 0.65 +0.6 3,137,773 + SGL_RS16440 0.68 +0.9 3,137,781 - SGL_RS16440 0.68 +0.2 3,137,809 + SGL_RS16440 0.69 +1.0 3,137,817 - SGL_RS16440 0.70 +1.7 3,137,849 + SGL_RS16440 0.71 +0.6 3,138,007 + SGL_RS16440 0.77 +1.1 3,138,073 - SGL_RS16440 0.79 +0.3 3,138,226 + SGL_RS16440 0.85 +0.5 3,138,312 - SGL_RS16440 0.89 +1.3 3,138,358 - +1.0 3,138,402 + +0.5 3,138,446 + +1.2 3,138,497 - -0.3 3,138,500 + +0.6 3,138,506 + +0.9 3,138,506 + +0.5 3,138,506 + +1.4 3,138,514 - +0.4 3,138,663 - +0.1 3,138,814 + +0.5 3,138,825 + -0.5 3,138,885 + -0.5 3,138,887 - -0.0 3,138,890 + -0.1 3,138,914 + -0.3 3,138,935 - +0.2 3,138,949 + +0.2 3,139,020 - SGL_RS16445 0.11 -0.2 3,139,037 - SGL_RS16445 0.13 -0.2 3,139,057 + SGL_RS16445 0.15 -0.5 3,139,095 - SGL_RS16445 0.19 +0.2 3,139,104 + SGL_RS16445 0.20 +0.2 3,139,236 + SGL_RS16445 0.34 -0.2 3,139,425 + SGL_RS16445 0.54 -0.0 3,139,438 - SGL_RS16445 0.55 -1.4 3,139,443 - SGL_RS16445 0.56 -1.3
Or see this region's nucleotide sequence