Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06967 and MPMX19_06968 are separated by 217 nucleotides MPMX19_06968 and MPMX19_06969 overlap by 4 nucleotides MPMX19_06969 and MPMX19_06970 are separated by 8 nucleotides MPMX19_06970 and MPMX19_06971 are separated by 23 nucleotides
MPMX19_06967: MPMX19_06967 - hypothetical protein, at 244,274 to 245,032
_06967
MPMX19_06968: MPMX19_06968 - hypothetical protein, at 245,250 to 246,743
_06968
MPMX19_06969: MPMX19_06969 - hypothetical protein, at 246,740 to 246,994
_06969
MPMX19_06970: MPMX19_06970 - putative ABC transporter ATP-binding protein YknY, at 247,003 to 247,695
_06970
MPMX19_06971: MPMX19_06971 - Macrolide export ATP-binding/permease protein MacB, at 247,719 to 248,921
_06971
Position (kb)
245
246
247 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 244.295 kb on + strand at 244.295 kb on + strand at 244.295 kb on + strand at 244.295 kb on + strand at 244.295 kb on + strand at 244.295 kb on + strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.296 kb on - strand at 244.297 kb on + strand at 244.297 kb on + strand at 244.298 kb on - strand at 244.516 kb on + strand, within MPMX19_06967 at 244.557 kb on + strand, within MPMX19_06967 at 244.624 kb on + strand, within MPMX19_06967 at 244.726 kb on - strand, within MPMX19_06967 at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.006 kb on + strand at 245.007 kb on - strand at 245.163 kb on + strand at 245.164 kb on - strand at 245.164 kb on - strand at 245.178 kb on + strand at 245.179 kb on - strand at 245.179 kb on - strand at 245.179 kb on - strand at 245.328 kb on + strand at 245.328 kb on + strand at 245.403 kb on + strand, within MPMX19_06968 at 245.403 kb on + strand, within MPMX19_06968 at 245.403 kb on + strand, within MPMX19_06968 at 245.403 kb on + strand, within MPMX19_06968 at 245.403 kb on + strand, within MPMX19_06968 at 245.404 kb on - strand, within MPMX19_06968 at 245.404 kb on - strand, within MPMX19_06968 at 245.423 kb on + strand, within MPMX19_06968 at 245.423 kb on + strand, within MPMX19_06968 at 245.424 kb on - strand, within MPMX19_06968 at 245.442 kb on + strand, within MPMX19_06968 at 245.442 kb on + strand, within MPMX19_06968 at 245.442 kb on + strand, within MPMX19_06968 at 245.466 kb on + strand, within MPMX19_06968 at 245.466 kb on + strand, within MPMX19_06968 at 245.466 kb on + strand, within MPMX19_06968 at 245.466 kb on + strand, within MPMX19_06968 at 245.466 kb on + strand, within MPMX19_06968 at 245.467 kb on - strand, within MPMX19_06968 at 245.467 kb on - strand, within MPMX19_06968 at 245.775 kb on + strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.776 kb on - strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.835 kb on + strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 245.836 kb on - strand, within MPMX19_06968 at 246.165 kb on + strand, within MPMX19_06968 at 246.166 kb on - strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.501 kb on + strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.502 kb on - strand, within MPMX19_06968 at 246.657 kb on + strand at 246.657 kb on + strand at 246.657 kb on + strand at 246.658 kb on - strand at 246.658 kb on - strand at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.917 kb on + strand, within MPMX19_06969 at 246.918 kb on - strand, within MPMX19_06969 at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.032 kb on + strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.033 kb on - strand at 247.284 kb on - strand, within MPMX19_06970
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 244,295 + -1.2 244,295 + -1.7 244,295 + -0.0 244,295 + +0.5 244,295 + -0.2 244,295 + -0.3 244,296 - -0.5 244,296 - -0.1 244,296 - -0.1 244,296 - +0.3 244,296 - -0.1 244,296 - +0.2 244,296 - +2.3 244,296 - -0.9 244,297 + -0.7 244,297 + -1.1 244,298 - +0.3 244,516 + MPMX19_06967 0.32 -1.4 244,557 + MPMX19_06967 0.37 -1.6 244,624 + MPMX19_06967 0.46 -0.5 244,726 - MPMX19_06967 0.60 -1.5 245,006 + -2.0 245,006 + +0.3 245,006 + +0.3 245,006 + +0.0 245,006 + -0.4 245,006 + -0.8 245,006 + +0.5 245,006 + +0.1 245,007 - -0.2 245,163 + +0.1 245,164 - -0.9 245,164 - +0.0 245,178 + +0.5 245,179 - +0.0 245,179 - -0.5 245,179 - +0.7 245,328 + +0.0 245,328 + -0.1 245,403 + MPMX19_06968 0.10 -0.2 245,403 + MPMX19_06968 0.10 -0.1 245,403 + MPMX19_06968 0.10 +0.6 245,403 + MPMX19_06968 0.10 +0.7 245,403 + MPMX19_06968 0.10 -1.4 245,404 - MPMX19_06968 0.10 -0.9 245,404 - MPMX19_06968 0.10 -0.6 245,423 + MPMX19_06968 0.12 -0.7 245,423 + MPMX19_06968 0.12 -0.8 245,424 - MPMX19_06968 0.12 -0.8 245,442 + MPMX19_06968 0.13 -0.5 245,442 + MPMX19_06968 0.13 +0.1 245,442 + MPMX19_06968 0.13 -0.2 245,466 + MPMX19_06968 0.14 +1.1 245,466 + MPMX19_06968 0.14 +0.2 245,466 + MPMX19_06968 0.14 +0.1 245,466 + MPMX19_06968 0.14 -0.6 245,466 + MPMX19_06968 0.14 -0.2 245,467 - MPMX19_06968 0.15 +0.8 245,467 - MPMX19_06968 0.15 -2.1 245,775 + MPMX19_06968 0.35 -1.1 245,776 - MPMX19_06968 0.35 +0.6 245,776 - MPMX19_06968 0.35 -1.8 245,776 - MPMX19_06968 0.35 -1.2 245,835 + MPMX19_06968 0.39 -0.3 245,835 + MPMX19_06968 0.39 -0.7 245,835 + MPMX19_06968 0.39 -1.4 245,836 - MPMX19_06968 0.39 -0.7 245,836 - MPMX19_06968 0.39 -0.2 245,836 - MPMX19_06968 0.39 +0.5 245,836 - MPMX19_06968 0.39 -0.9 246,165 + MPMX19_06968 0.61 -0.8 246,166 - MPMX19_06968 0.61 -0.9 246,501 + MPMX19_06968 0.84 -1.4 246,501 + MPMX19_06968 0.84 -1.1 246,502 - MPMX19_06968 0.84 +1.4 246,502 - MPMX19_06968 0.84 -0.7 246,502 - MPMX19_06968 0.84 -2.1 246,502 - MPMX19_06968 0.84 -0.5 246,657 + +0.6 246,657 + -0.9 246,657 + -1.8 246,658 - -1.7 246,658 - +0.9 246,917 + MPMX19_06969 0.69 -1.7 246,917 + MPMX19_06969 0.69 -0.5 246,917 + MPMX19_06969 0.69 +1.5 246,918 - MPMX19_06969 0.70 -0.4 247,032 + -0.1 247,032 + -0.4 247,032 + -1.1 247,032 + -1.7 247,033 - -1.4 247,033 - +0.6 247,033 - -0.9 247,033 - -0.1 247,033 - -0.4 247,033 - +0.0 247,033 - -0.5 247,284 - MPMX19_06970 0.41 -1.1
Or see this region's nucleotide sequence