Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06128 and MPMX19_06129 overlap by 1 nucleotides MPMX19_06129 and MPMX19_06130 are separated by 149 nucleotides MPMX19_06130 and MPMX19_06131 are separated by 226 nucleotides
MPMX19_06128: MPMX19_06128 - hypothetical protein, at 313,872 to 316,703
_06128
MPMX19_06129: MPMX19_06129 - hypothetical protein, at 316,703 to 317,209
_06129
MPMX19_06130: MPMX19_06130 - hypothetical protein, at 317,359 to 319,071
_06130
MPMX19_06131: MPMX19_06131 - Ribose-phosphate pyrophosphokinase, at 319,298 to 320,209
_06131
Position (kb) 317
318
319
320 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.441 kb on + strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.442 kb on - strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.715 kb on + strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 316.716 kb on - strand at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.079 kb on + strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.080 kb on - strand, within MPMX19_06129 at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.203 kb on + strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.204 kb on - strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.288 kb on + strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.289 kb on - strand at 317.300 kb on + strand at 317.300 kb on + strand at 317.301 kb on - strand at 317.312 kb on + strand at 317.315 kb on + strand at 317.316 kb on - strand at 317.316 kb on - strand at 317.318 kb on + strand at 317.319 kb on - strand at 317.319 kb on - strand at 317.582 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.603 kb on + strand, within MPMX19_06130 at 317.604 kb on - strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.606 kb on + strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 317.607 kb on - strand, within MPMX19_06130 at 318.762 kb on - strand, within MPMX19_06130 at 318.803 kb on + strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 319.307 kb on - strand at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 320.051 kb on + strand, within MPMX19_06131
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 316,441 + -0.4 316,441 + -0.1 316,441 + -0.3 316,441 + +1.3 316,441 + -0.3 316,441 + -0.8 316,441 + +0.2 316,441 + -0.7 316,441 + -1.0 316,441 + -2.0 316,442 - -0.6 316,442 - -0.6 316,442 - -0.7 316,442 - +0.9 316,442 - -0.6 316,442 - -1.9 316,442 - -2.3 316,442 - -1.3 316,442 - -0.5 316,442 - +1.0 316,442 - -0.2 316,442 - -1.5 316,715 + +0.4 316,715 + -0.3 316,715 + +2.0 316,715 + +1.0 316,715 + -0.2 316,716 - -0.6 316,716 - -1.8 316,716 - +0.3 316,716 - -0.6 316,716 - +0.4 317,079 + MPMX19_06129 0.74 +0.7 317,079 + MPMX19_06129 0.74 -1.0 317,079 + MPMX19_06129 0.74 +0.3 317,079 + MPMX19_06129 0.74 -1.0 317,079 + MPMX19_06129 0.74 -0.6 317,080 - MPMX19_06129 0.74 +1.4 317,080 - MPMX19_06129 0.74 -2.0 317,080 - MPMX19_06129 0.74 +0.6 317,080 - MPMX19_06129 0.74 -2.1 317,203 + +1.6 317,203 + +0.3 317,203 + -1.7 317,203 + +0.0 317,203 + +0.3 317,203 + -1.0 317,203 + -0.3 317,203 + -0.3 317,203 + -0.9 317,203 + -1.3 317,203 + +0.1 317,203 + +0.0 317,203 + -0.1 317,203 + -0.4 317,203 + -0.4 317,203 + -0.1 317,203 + -1.3 317,204 - -1.3 317,204 - -0.5 317,204 - -0.9 317,204 - -0.6 317,204 - -1.4 317,204 - -0.2 317,204 - -0.4 317,204 - -0.3 317,204 - -0.2 317,204 - -1.1 317,288 + +1.4 317,288 + +0.2 317,288 + -0.6 317,288 + +0.0 317,288 + -0.2 317,288 + +0.0 317,289 - -0.9 317,289 - +0.4 317,289 - +0.6 317,289 - -1.2 317,300 + +0.3 317,300 + +1.0 317,301 - -2.4 317,312 + -0.7 317,315 + -1.2 317,316 - -0.2 317,316 - -0.1 317,318 + -0.4 317,319 - -1.0 317,319 - -1.2 317,582 + MPMX19_06130 0.13 +0.3 317,603 + MPMX19_06130 0.14 +1.6 317,603 + MPMX19_06130 0.14 -0.3 317,604 - MPMX19_06130 0.14 +0.8 317,606 + MPMX19_06130 0.14 +0.2 317,606 + MPMX19_06130 0.14 +1.4 317,606 + MPMX19_06130 0.14 -0.3 317,606 + MPMX19_06130 0.14 -0.1 317,606 + MPMX19_06130 0.14 +0.3 317,607 - MPMX19_06130 0.14 -1.0 317,607 - MPMX19_06130 0.14 -0.3 317,607 - MPMX19_06130 0.14 +0.1 317,607 - MPMX19_06130 0.14 -1.4 317,607 - MPMX19_06130 0.14 -0.3 317,607 - MPMX19_06130 0.14 -0.2 317,607 - MPMX19_06130 0.14 +0.7 318,762 - MPMX19_06130 0.82 -0.2 318,803 + MPMX19_06130 0.84 -0.2 318,804 - MPMX19_06130 0.84 -1.1 318,804 - MPMX19_06130 0.84 +0.9 318,804 - MPMX19_06130 0.84 -2.6 319,307 - -0.9 319,455 + MPMX19_06131 0.17 +0.9 319,455 + MPMX19_06131 0.17 +0.9 319,455 + MPMX19_06131 0.17 +0.6 319,455 + MPMX19_06131 0.17 +1.0 319,455 + MPMX19_06131 0.17 +0.6 319,455 + MPMX19_06131 0.17 -0.7 319,455 + MPMX19_06131 0.17 +0.5 319,455 + MPMX19_06131 0.17 -1.7 319,456 - MPMX19_06131 0.17 -0.4 319,456 - MPMX19_06131 0.17 -0.5 319,456 - MPMX19_06131 0.17 +0.3 319,456 - MPMX19_06131 0.17 +0.8 319,456 - MPMX19_06131 0.17 -0.7 319,456 - MPMX19_06131 0.17 -0.1 319,923 + MPMX19_06131 0.69 -1.9 319,923 + MPMX19_06131 0.69 -0.1 319,923 + MPMX19_06131 0.69 -0.2 319,923 + MPMX19_06131 0.69 -0.4 319,923 + MPMX19_06131 0.69 -0.1 319,923 + MPMX19_06131 0.69 -0.6 319,923 + MPMX19_06131 0.69 +0.3 319,923 + MPMX19_06131 0.69 +0.3 319,923 + MPMX19_06131 0.69 -1.0 319,923 + MPMX19_06131 0.69 +0.0 319,923 + MPMX19_06131 0.69 -1.6 319,923 + MPMX19_06131 0.69 -0.6 319,923 + MPMX19_06131 0.69 -0.6 319,923 + MPMX19_06131 0.69 +1.0 319,923 + MPMX19_06131 0.69 +0.4 319,923 + MPMX19_06131 0.69 -1.2 319,923 + MPMX19_06131 0.69 -0.6 319,923 + MPMX19_06131 0.69 +0.5 319,923 + MPMX19_06131 0.69 +0.2 319,923 + MPMX19_06131 0.69 +0.0 319,923 + MPMX19_06131 0.69 +0.0 319,923 + MPMX19_06131 0.69 -1.7 319,923 + MPMX19_06131 0.69 +0.7 319,923 + MPMX19_06131 0.69 -0.6 319,924 - MPMX19_06131 0.69 -0.4 319,924 - MPMX19_06131 0.69 +0.4 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 -0.4 319,924 - MPMX19_06131 0.69 +0.6 319,924 - MPMX19_06131 0.69 -0.9 319,924 - MPMX19_06131 0.69 +1.3 319,924 - MPMX19_06131 0.69 +1.0 319,924 - MPMX19_06131 0.69 -1.2 319,924 - MPMX19_06131 0.69 -0.2 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 +0.7 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 +1.4 319,924 - MPMX19_06131 0.69 -0.1 319,924 - MPMX19_06131 0.69 +0.6 319,924 - MPMX19_06131 0.69 -0.9 319,924 - MPMX19_06131 0.69 +0.7 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 -1.4 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 -0.6 319,924 - MPMX19_06131 0.69 -0.7 319,924 - MPMX19_06131 0.69 -0.3 319,932 + MPMX19_06131 0.70 -0.4 319,932 + MPMX19_06131 0.70 -0.9 319,932 + MPMX19_06131 0.70 -0.2 319,932 + MPMX19_06131 0.70 +0.6 319,932 + MPMX19_06131 0.70 -1.4 319,932 + MPMX19_06131 0.70 +0.0 319,932 + MPMX19_06131 0.70 -0.8 319,932 + MPMX19_06131 0.70 +0.8 319,932 + MPMX19_06131 0.70 -1.1 319,932 + MPMX19_06131 0.70 -2.5 319,932 + MPMX19_06131 0.70 -0.6 319,932 + MPMX19_06131 0.70 -1.4 319,932 + MPMX19_06131 0.70 -1.4 319,932 + MPMX19_06131 0.70 -2.8 319,932 + MPMX19_06131 0.70 +1.0 319,932 + MPMX19_06131 0.70 -2.6 319,932 + MPMX19_06131 0.70 +0.3 319,933 - MPMX19_06131 0.70 +0.1 319,933 - MPMX19_06131 0.70 -0.8 319,933 - MPMX19_06131 0.70 -0.3 319,933 - MPMX19_06131 0.70 -0.2 319,933 - MPMX19_06131 0.70 +1.0 319,933 - MPMX19_06131 0.70 -0.6 319,933 - MPMX19_06131 0.70 +0.4 319,933 - MPMX19_06131 0.70 -0.1 319,933 - MPMX19_06131 0.70 +1.0 319,933 - MPMX19_06131 0.70 -0.2 319,933 - MPMX19_06131 0.70 +0.3 319,933 - MPMX19_06131 0.70 -0.8 320,051 + MPMX19_06131 0.83 -0.6
Or see this region's nucleotide sequence