Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05597 and MPMX19_05598 are separated by 370 nucleotides MPMX19_05598 and MPMX19_05599 are separated by 81 nucleotides MPMX19_05599 and MPMX19_05600 are separated by 16 nucleotides MPMX19_05600 and MPMX19_05601 overlap by 4 nucleotides
MPMX19_05597: MPMX19_05597 - hypothetical protein, at 308,125 to 308,610
_05597
MPMX19_05598: MPMX19_05598 - hypothetical protein, at 308,981 to 309,343
_05598
MPMX19_05599: MPMX19_05599 - hypothetical protein, at 309,425 to 310,189
_05599
MPMX19_05600: MPMX19_05600 - hypothetical protein, at 310,206 to 311,006
_05600
MPMX19_05601: MPMX19_05601 - putative ABC transporter ATP-binding protein YejF, at 311,003 to 312,703
_05601
Position (kb) 309
310
311 Strain fitness (log2 ratio) -2
-1
0
1 at 308.643 kb on - strand at 308.643 kb on - strand at 308.643 kb on - strand at 308.692 kb on + strand at 308.692 kb on + strand at 308.692 kb on + strand at 308.692 kb on + strand at 308.692 kb on + strand at 308.693 kb on - strand at 308.693 kb on - strand at 308.728 kb on + strand at 308.728 kb on + strand at 308.728 kb on + strand at 308.729 kb on - strand at 308.845 kb on + strand at 308.875 kb on + strand at 308.875 kb on + strand at 308.875 kb on + strand at 308.875 kb on + strand at 308.875 kb on + strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.876 kb on - strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.911 kb on + strand at 308.912 kb on - strand at 308.999 kb on + strand at 308.999 kb on + strand at 308.999 kb on + strand at 308.999 kb on + strand at 308.999 kb on + strand at 308.999 kb on + strand at 309.000 kb on - strand at 309.000 kb on - strand at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.173 kb on + strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.174 kb on - strand, within MPMX19_05598 at 309.341 kb on + strand at 309.341 kb on + strand at 309.341 kb on + strand at 309.341 kb on + strand at 309.341 kb on + strand at 309.341 kb on + strand at 309.342 kb on - strand at 309.342 kb on - strand at 309.342 kb on - strand at 309.372 kb on + strand at 309.373 kb on - strand at 309.373 kb on - strand at 309.373 kb on - strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.394 kb on + strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 309.395 kb on - strand at 310.110 kb on + strand, within MPMX19_05599 at 310.110 kb on + strand, within MPMX19_05599 at 310.111 kb on - strand, within MPMX19_05599 at 310.111 kb on - strand, within MPMX19_05599 at 310.175 kb on + strand at 310.175 kb on + strand at 310.175 kb on + strand at 310.175 kb on + strand at 310.175 kb on + strand at 310.176 kb on - strand at 310.176 kb on - strand at 310.176 kb on - strand at 310.176 kb on - strand at 310.176 kb on - strand at 310.215 kb on + strand at 310.216 kb on - strand at 310.216 kb on - strand at 310.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 308,643 - -0.5 308,643 - +0.3 308,643 - -0.5 308,692 + +0.1 308,692 + -0.6 308,692 + +1.1 308,692 + -1.2 308,692 + -1.9 308,693 - +0.2 308,693 - -0.3 308,728 + -1.5 308,728 + +0.3 308,728 + -0.6 308,729 - -2.1 308,845 + -0.8 308,875 + -0.1 308,875 + -0.7 308,875 + -0.3 308,875 + +1.4 308,875 + -0.6 308,876 - -0.7 308,876 - -0.3 308,876 - -0.7 308,876 - +0.7 308,876 - +0.8 308,876 - -0.6 308,876 - -0.8 308,911 + +1.3 308,911 + -0.1 308,911 + -1.2 308,911 + +1.1 308,911 + -1.0 308,911 + +1.6 308,911 + +0.1 308,912 - -2.2 308,999 + +0.3 308,999 + +0.0 308,999 + +1.0 308,999 + -0.3 308,999 + -1.9 308,999 + -0.2 309,000 - +0.9 309,000 - -0.2 309,173 + MPMX19_05598 0.53 +0.3 309,173 + MPMX19_05598 0.53 +1.0 309,173 + MPMX19_05598 0.53 -2.1 309,173 + MPMX19_05598 0.53 -0.5 309,173 + MPMX19_05598 0.53 -0.4 309,173 + MPMX19_05598 0.53 +0.4 309,173 + MPMX19_05598 0.53 -0.7 309,173 + MPMX19_05598 0.53 -0.8 309,173 + MPMX19_05598 0.53 -0.3 309,173 + MPMX19_05598 0.53 -0.5 309,173 + MPMX19_05598 0.53 -1.5 309,173 + MPMX19_05598 0.53 -1.3 309,173 + MPMX19_05598 0.53 +0.0 309,173 + MPMX19_05598 0.53 +0.0 309,173 + MPMX19_05598 0.53 +1.4 309,174 - MPMX19_05598 0.53 -0.8 309,174 - MPMX19_05598 0.53 +0.0 309,174 - MPMX19_05598 0.53 +0.2 309,174 - MPMX19_05598 0.53 +1.6 309,174 - MPMX19_05598 0.53 +0.4 309,174 - MPMX19_05598 0.53 +0.0 309,174 - MPMX19_05598 0.53 +0.0 309,174 - MPMX19_05598 0.53 -0.2 309,174 - MPMX19_05598 0.53 +1.6 309,174 - MPMX19_05598 0.53 +0.4 309,174 - MPMX19_05598 0.53 -0.3 309,174 - MPMX19_05598 0.53 -0.8 309,174 - MPMX19_05598 0.53 -2.3 309,341 + -0.4 309,341 + -0.6 309,341 + -1.0 309,341 + -1.0 309,341 + -0.8 309,341 + +1.3 309,342 - -0.6 309,342 - -1.0 309,342 - -1.2 309,372 + -1.0 309,373 - -0.9 309,373 - +0.9 309,373 - -0.3 309,394 + +0.0 309,394 + -1.2 309,394 + +0.4 309,394 + +0.0 309,394 + +0.6 309,394 + -0.7 309,394 + -1.5 309,394 + -0.3 309,394 + -0.2 309,394 + +1.0 309,394 + -2.3 309,394 + -0.2 309,394 + -1.1 309,394 + +0.0 309,394 + -0.2 309,394 + -0.5 309,394 + +0.6 309,394 + -0.7 309,394 + -0.5 309,394 + +0.0 309,394 + +0.0 309,394 + +1.0 309,394 + +0.3 309,394 + +0.0 309,394 + +0.5 309,394 + +0.3 309,394 + +1.1 309,394 + -0.9 309,394 + +0.3 309,394 + -0.8 309,394 + +0.7 309,394 + -0.4 309,394 + -2.6 309,394 + -0.6 309,394 + +0.8 309,394 + +0.0 309,394 + -1.2 309,394 + +0.8 309,394 + +0.0 309,395 - -1.0 309,395 - +0.4 309,395 - -0.2 309,395 - -1.6 309,395 - -0.0 309,395 - -0.7 309,395 - -0.6 309,395 - -0.8 309,395 - +0.0 309,395 - -2.0 309,395 - -1.2 309,395 - +0.3 309,395 - -1.3 309,395 - -0.7 309,395 - -1.2 309,395 - -0.3 309,395 - -0.8 309,395 - +0.0 309,395 - -0.2 309,395 - -0.6 309,395 - +1.1 309,395 - -1.7 309,395 - +1.5 309,395 - -1.5 309,395 - -1.2 309,395 - -0.8 309,395 - -0.6 309,395 - +0.1 309,395 - +0.8 309,395 - +0.0 309,395 - -0.1 309,395 - +0.1 309,395 - +0.4 309,395 - +0.4 309,395 - -0.3 309,395 - -0.6 309,395 - -0.3 309,395 - -1.2 309,395 - -1.0 310,110 + MPMX19_05599 0.90 -0.1 310,110 + MPMX19_05599 0.90 -1.8 310,111 - MPMX19_05599 0.90 -1.1 310,111 - MPMX19_05599 0.90 +0.0 310,175 + -0.1 310,175 + -0.8 310,175 + -1.2 310,175 + +0.4 310,175 + -1.1 310,176 - +0.2 310,176 - +0.8 310,176 - -2.2 310,176 - +0.6 310,176 - -0.2 310,215 + +0.6 310,216 - +0.0 310,216 - +0.0 310,216 - -2.4
Or see this region's nucleotide sequence