Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03049 and MPMX19_03050 are separated by 28 nucleotides MPMX19_03050 and MPMX19_03051 are separated by 50 nucleotides MPMX19_03051 and MPMX19_03052 are separated by 17 nucleotides
MPMX19_03049: MPMX19_03049 - putative protease YhbU, at 313,405 to 314,391
_03049
MPMX19_03050: MPMX19_03050 - hypothetical protein, at 314,420 to 315,331
_03050
MPMX19_03051: MPMX19_03051 - Sec-independent protein translocase protein TatA, at 315,382 to 315,549
_03051
MPMX19_03052: MPMX19_03052 - hypothetical protein, at 315,567 to 316,577
_03052
Position (kb) 315
316 Strain fitness (log2 ratio) -2
-1
0
1 at 314.390 kb on - strand at 314.390 kb on - strand at 314.486 kb on + strand at 314.486 kb on + strand at 314.487 kb on - strand at 314.487 kb on - strand at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.792 kb on + strand, within MPMX19_03050 at 314.793 kb on - strand, within MPMX19_03050 at 314.793 kb on - strand, within MPMX19_03050 at 314.793 kb on - strand, within MPMX19_03050 at 314.793 kb on - strand, within MPMX19_03050 at 314.967 kb on - strand, within MPMX19_03050 at 315.296 kb on + strand at 315.296 kb on + strand at 315.296 kb on + strand at 315.296 kb on + strand at 315.296 kb on + strand at 315.296 kb on + strand at 315.297 kb on - strand at 315.297 kb on - strand at 315.297 kb on - strand at 315.297 kb on - strand at 315.628 kb on + strand at 315.629 kb on - strand at 315.809 kb on - strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.006 kb on + strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.007 kb on - strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.174 kb on + strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052 at 316.175 kb on - strand, within MPMX19_03052
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 314,390 - +0.7 314,390 - +0.2 314,486 + +0.4 314,486 + -1.4 314,487 - +0.1 314,487 - +0.1 314,792 + MPMX19_03050 0.41 +0.9 314,792 + MPMX19_03050 0.41 -0.1 314,792 + MPMX19_03050 0.41 +0.9 314,792 + MPMX19_03050 0.41 -1.6 314,792 + MPMX19_03050 0.41 -1.5 314,792 + MPMX19_03050 0.41 -0.8 314,792 + MPMX19_03050 0.41 -0.2 314,792 + MPMX19_03050 0.41 +0.1 314,793 - MPMX19_03050 0.41 -0.2 314,793 - MPMX19_03050 0.41 -0.5 314,793 - MPMX19_03050 0.41 +0.1 314,793 - MPMX19_03050 0.41 +0.6 314,967 - MPMX19_03050 0.60 -1.8 315,296 + +0.3 315,296 + -1.1 315,296 + +0.1 315,296 + -1.2 315,296 + -0.2 315,296 + -0.9 315,297 - -1.1 315,297 - -1.6 315,297 - -2.4 315,297 - +0.3 315,628 + -0.4 315,629 - +0.8 315,809 - MPMX19_03052 0.24 -0.8 316,006 + MPMX19_03052 0.43 -0.5 316,006 + MPMX19_03052 0.43 +0.9 316,006 + MPMX19_03052 0.43 +0.5 316,006 + MPMX19_03052 0.43 +0.2 316,006 + MPMX19_03052 0.43 +0.2 316,006 + MPMX19_03052 0.43 +0.5 316,006 + MPMX19_03052 0.43 +0.1 316,006 + MPMX19_03052 0.43 -0.2 316,007 - MPMX19_03052 0.44 -0.2 316,007 - MPMX19_03052 0.44 +0.1 316,007 - MPMX19_03052 0.44 -0.7 316,007 - MPMX19_03052 0.44 -1.4 316,007 - MPMX19_03052 0.44 -2.5 316,007 - MPMX19_03052 0.44 +0.1 316,007 - MPMX19_03052 0.44 +0.4 316,174 + MPMX19_03052 0.60 +1.1 316,174 + MPMX19_03052 0.60 +0.6 316,174 + MPMX19_03052 0.60 -0.4 316,174 + MPMX19_03052 0.60 -0.5 316,174 + MPMX19_03052 0.60 -0.5 316,174 + MPMX19_03052 0.60 -0.2 316,174 + MPMX19_03052 0.60 +0.5 316,174 + MPMX19_03052 0.60 -0.1 316,174 + MPMX19_03052 0.60 -0.3 316,175 - MPMX19_03052 0.60 -0.7 316,175 - MPMX19_03052 0.60 -0.6 316,175 - MPMX19_03052 0.60 -0.6 316,175 - MPMX19_03052 0.60 -0.4 316,175 - MPMX19_03052 0.60 -1.2 316,175 - MPMX19_03052 0.60 -1.3
Or see this region's nucleotide sequence