Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02554 and MPMX19_02555 are separated by 381 nucleotides MPMX19_02555 and MPMX19_02556 are separated by 68 nucleotides MPMX19_02556 and MPMX19_02557 are separated by 92 nucleotides
MPMX19_02554: MPMX19_02554 - Transcription termination factor Rho, at 2,669,812 to 2,671,068
_02554
MPMX19_02555: MPMX19_02555 - hypothetical protein, at 2,671,450 to 2,671,878
_02555
MPMX19_02556: MPMX19_02556 - Ferrochelatase, at 2,671,947 to 2,673,101
_02556
MPMX19_02557: MPMX19_02557 - Uroporphyrinogen decarboxylase, at 2,673,194 to 2,674,297
_02557
Position (kb)
2671
2672
2673
2674 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2671.901 kb on - strand at 2671.901 kb on - strand at 2673.112 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,671,901 - +0.1 2,671,901 - +0.9 2,673,112 - -0.3 2,673,170 - +0.3 2,673,170 - -0.1 2,673,170 - -0.5 2,673,170 - -0.5 2,673,170 - -2.8 2,673,170 - -0.4 2,673,170 - -0.1 2,673,170 - -0.1 2,673,170 - -0.5 2,673,170 - +1.3 2,673,170 - -0.8 2,673,170 - -0.3 2,673,170 - +0.1 2,673,170 - +0.2
Or see this region's nucleotide sequence