Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ispE and lolB are separated by 50 nucleotides lolB and OKGIIK_10600 overlap by 4 nucleotides OKGIIK_10600 and hemA are separated by 91 nucleotides
OKGIIK_10590: ispE - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 2,271,608 to 2,273,008
ispE
OKGIIK_10595: lolB - lipoprotein insertase outer membrane protein LolB, at 2,273,059 to 2,273,670
lolB
OKGIIK_10600: OKGIIK_10600 - Beta-barrel assembly-enhancing protease, at 2,273,667 to 2,275,424
_10600
OKGIIK_10605: hemA - glutamyl-tRNA reductase, at 2,275,516 to 2,276,784
hemA
Position (kb)
2273
2274
2275
2276 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2272.738 kb on - strand, within ispE at 2272.738 kb on - strand, within ispE at 2272.738 kb on - strand, within ispE at 2272.903 kb on - strand at 2272.903 kb on - strand at 2272.903 kb on - strand at 2272.903 kb on - strand at 2272.903 kb on - strand at 2272.903 kb on - strand at 2273.052 kb on + strand at 2273.052 kb on + strand at 2273.052 kb on + strand at 2273.052 kb on + strand at 2273.053 kb on - strand at 2273.053 kb on - strand at 2273.053 kb on - strand at 2273.872 kb on + strand, within OKGIIK_10600 at 2273.873 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2273.987 kb on - strand, within OKGIIK_10600 at 2274.083 kb on - strand, within OKGIIK_10600 at 2274.083 kb on - strand, within OKGIIK_10600 at 2274.083 kb on - strand, within OKGIIK_10600 at 2274.083 kb on - strand, within OKGIIK_10600 at 2274.101 kb on - strand, within OKGIIK_10600 at 2274.101 kb on - strand, within OKGIIK_10600 at 2274.101 kb on - strand, within OKGIIK_10600 at 2274.101 kb on - strand, within OKGIIK_10600 at 2274.101 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.167 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.185 kb on - strand, within OKGIIK_10600 at 2274.239 kb on - strand, within OKGIIK_10600 at 2274.239 kb on - strand, within OKGIIK_10600 at 2274.239 kb on - strand, within OKGIIK_10600 at 2274.239 kb on - strand, within OKGIIK_10600 at 2274.362 kb on - strand, within OKGIIK_10600 at 2274.362 kb on - strand, within OKGIIK_10600 at 2274.362 kb on - strand, within OKGIIK_10600 at 2274.362 kb on - strand, within OKGIIK_10600 at 2274.362 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.419 kb on - strand, within OKGIIK_10600 at 2274.467 kb on - strand, within OKGIIK_10600 at 2274.467 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.527 kb on - strand, within OKGIIK_10600 at 2274.578 kb on - strand, within OKGIIK_10600 at 2274.578 kb on - strand, within OKGIIK_10600 at 2274.578 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.608 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.719 kb on - strand, within OKGIIK_10600 at 2274.773 kb on - strand, within OKGIIK_10600 at 2274.773 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.163 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.166 kb on - strand, within OKGIIK_10600 at 2275.365 kb on - strand at 2275.365 kb on - strand at 2275.365 kb on - strand at 2275.409 kb on + strand at 2275.410 kb on - strand at 2275.410 kb on - strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.471 kb on + strand at 2275.472 kb on - strand at 2275.476 kb on + strand at 2275.476 kb on + strand at 2275.476 kb on + strand at 2275.476 kb on + strand at 2275.476 kb on + strand at 2275.476 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,272,738 - ispE OKGIIK_10590 0.81 -0.0 2,272,738 - ispE OKGIIK_10590 0.81 -1.6 2,272,738 - ispE OKGIIK_10590 0.81 -0.8 2,272,903 - -1.3 2,272,903 - +0.2 2,272,903 - -1.8 2,272,903 - -1.1 2,272,903 - -0.3 2,272,903 - -1.7 2,273,052 + +0.2 2,273,052 + -2.8 2,273,052 + -1.6 2,273,052 + -0.1 2,273,053 - +0.7 2,273,053 - +0.6 2,273,053 - -0.3 2,273,872 + OKGIIK_10600 0.12 -2.1 2,273,873 - OKGIIK_10600 0.12 -1.3 2,273,987 - OKGIIK_10600 0.18 +0.2 2,273,987 - OKGIIK_10600 0.18 -2.1 2,273,987 - OKGIIK_10600 0.18 +0.5 2,273,987 - OKGIIK_10600 0.18 -1.2 2,273,987 - OKGIIK_10600 0.18 -0.8 2,273,987 - OKGIIK_10600 0.18 -1.8 2,273,987 - OKGIIK_10600 0.18 -0.9 2,273,987 - OKGIIK_10600 0.18 -1.6 2,274,083 - OKGIIK_10600 0.24 -0.3 2,274,083 - OKGIIK_10600 0.24 -1.9 2,274,083 - OKGIIK_10600 0.24 -1.1 2,274,083 - OKGIIK_10600 0.24 +0.7 2,274,101 - OKGIIK_10600 0.25 -0.8 2,274,101 - OKGIIK_10600 0.25 -1.1 2,274,101 - OKGIIK_10600 0.25 -1.2 2,274,101 - OKGIIK_10600 0.25 +1.2 2,274,101 - OKGIIK_10600 0.25 -1.0 2,274,167 - OKGIIK_10600 0.28 +1.2 2,274,167 - OKGIIK_10600 0.28 -1.1 2,274,167 - OKGIIK_10600 0.28 -0.3 2,274,167 - OKGIIK_10600 0.28 -1.6 2,274,167 - OKGIIK_10600 0.28 -2.8 2,274,167 - OKGIIK_10600 0.28 -1.3 2,274,167 - OKGIIK_10600 0.28 +0.9 2,274,167 - OKGIIK_10600 0.28 -1.9 2,274,167 - OKGIIK_10600 0.28 -1.3 2,274,167 - OKGIIK_10600 0.28 -0.6 2,274,167 - OKGIIK_10600 0.28 -0.5 2,274,167 - OKGIIK_10600 0.28 -1.1 2,274,167 - OKGIIK_10600 0.28 -0.8 2,274,167 - OKGIIK_10600 0.28 -0.8 2,274,167 - OKGIIK_10600 0.28 -0.3 2,274,167 - OKGIIK_10600 0.28 -1.3 2,274,167 - OKGIIK_10600 0.28 -1.1 2,274,167 - OKGIIK_10600 0.28 -1.3 2,274,167 - OKGIIK_10600 0.28 -1.8 2,274,185 - OKGIIK_10600 0.29 -0.3 2,274,185 - OKGIIK_10600 0.29 +0.8 2,274,185 - OKGIIK_10600 0.29 -2.3 2,274,185 - OKGIIK_10600 0.29 -0.3 2,274,185 - OKGIIK_10600 0.29 -2.6 2,274,185 - OKGIIK_10600 0.29 +1.1 2,274,185 - OKGIIK_10600 0.29 -0.8 2,274,185 - OKGIIK_10600 0.29 -0.3 2,274,239 - OKGIIK_10600 0.33 -0.3 2,274,239 - OKGIIK_10600 0.33 -0.8 2,274,239 - OKGIIK_10600 0.33 +2.6 2,274,239 - OKGIIK_10600 0.33 -0.2 2,274,362 - OKGIIK_10600 0.40 -0.1 2,274,362 - OKGIIK_10600 0.40 -1.8 2,274,362 - OKGIIK_10600 0.40 -0.0 2,274,362 - OKGIIK_10600 0.40 -1.1 2,274,362 - OKGIIK_10600 0.40 -1.4 2,274,419 - OKGIIK_10600 0.43 +0.0 2,274,419 - OKGIIK_10600 0.43 -1.0 2,274,419 - OKGIIK_10600 0.43 -1.6 2,274,419 - OKGIIK_10600 0.43 -0.7 2,274,419 - OKGIIK_10600 0.43 -1.1 2,274,419 - OKGIIK_10600 0.43 +2.2 2,274,419 - OKGIIK_10600 0.43 -1.3 2,274,419 - OKGIIK_10600 0.43 -2.2 2,274,419 - OKGIIK_10600 0.43 -2.1 2,274,467 - OKGIIK_10600 0.46 +1.2 2,274,467 - OKGIIK_10600 0.46 +0.2 2,274,527 - OKGIIK_10600 0.49 +0.6 2,274,527 - OKGIIK_10600 0.49 +1.2 2,274,527 - OKGIIK_10600 0.49 -1.6 2,274,527 - OKGIIK_10600 0.49 +0.5 2,274,527 - OKGIIK_10600 0.49 -0.6 2,274,527 - OKGIIK_10600 0.49 +0.9 2,274,527 - OKGIIK_10600 0.49 -0.3 2,274,527 - OKGIIK_10600 0.49 -0.6 2,274,527 - OKGIIK_10600 0.49 +0.0 2,274,527 - OKGIIK_10600 0.49 -1.3 2,274,527 - OKGIIK_10600 0.49 +0.8 2,274,527 - OKGIIK_10600 0.49 +0.2 2,274,527 - OKGIIK_10600 0.49 -2.8 2,274,527 - OKGIIK_10600 0.49 +0.5 2,274,527 - OKGIIK_10600 0.49 -1.8 2,274,527 - OKGIIK_10600 0.49 -0.3 2,274,527 - OKGIIK_10600 0.49 -0.8 2,274,527 - OKGIIK_10600 0.49 +0.2 2,274,527 - OKGIIK_10600 0.49 -0.6 2,274,527 - OKGIIK_10600 0.49 -0.3 2,274,578 - OKGIIK_10600 0.52 -1.8 2,274,578 - OKGIIK_10600 0.52 +0.2 2,274,578 - OKGIIK_10600 0.52 -3.3 2,274,608 - OKGIIK_10600 0.54 -1.9 2,274,608 - OKGIIK_10600 0.54 +0.2 2,274,608 - OKGIIK_10600 0.54 -1.8 2,274,608 - OKGIIK_10600 0.54 -0.8 2,274,608 - OKGIIK_10600 0.54 -3.1 2,274,608 - OKGIIK_10600 0.54 +1.8 2,274,719 - OKGIIK_10600 0.60 -0.5 2,274,719 - OKGIIK_10600 0.60 +0.6 2,274,719 - OKGIIK_10600 0.60 -1.8 2,274,719 - OKGIIK_10600 0.60 -2.1 2,274,719 - OKGIIK_10600 0.60 -1.8 2,274,719 - OKGIIK_10600 0.60 -1.6 2,274,719 - OKGIIK_10600 0.60 -0.1 2,274,719 - OKGIIK_10600 0.60 +0.9 2,274,719 - OKGIIK_10600 0.60 -1.1 2,274,719 - OKGIIK_10600 0.60 -0.1 2,274,719 - OKGIIK_10600 0.60 -0.1 2,274,719 - OKGIIK_10600 0.60 +0.7 2,274,773 - OKGIIK_10600 0.63 -0.1 2,274,773 - OKGIIK_10600 0.63 -1.1 2,275,163 - OKGIIK_10600 0.85 -2.7 2,275,163 - OKGIIK_10600 0.85 -1.3 2,275,163 - OKGIIK_10600 0.85 -2.1 2,275,163 - OKGIIK_10600 0.85 +0.1 2,275,163 - OKGIIK_10600 0.85 -0.6 2,275,163 - OKGIIK_10600 0.85 -0.3 2,275,166 - OKGIIK_10600 0.85 -0.6 2,275,166 - OKGIIK_10600 0.85 -1.6 2,275,166 - OKGIIK_10600 0.85 -1.6 2,275,166 - OKGIIK_10600 0.85 -1.1 2,275,166 - OKGIIK_10600 0.85 -0.9 2,275,166 - OKGIIK_10600 0.85 -1.3 2,275,166 - OKGIIK_10600 0.85 -0.6 2,275,166 - OKGIIK_10600 0.85 -1.6 2,275,166 - OKGIIK_10600 0.85 -0.8 2,275,365 - +1.2 2,275,365 - -0.1 2,275,365 - -0.8 2,275,409 + +1.8 2,275,410 - +0.6 2,275,410 - -0.1 2,275,471 + +0.2 2,275,471 + -1.6 2,275,471 + -2.2 2,275,471 + +0.7 2,275,471 + -0.4 2,275,471 + -0.1 2,275,471 + -0.1 2,275,471 + -2.2 2,275,471 + -0.4 2,275,471 + -0.9 2,275,471 + +1.0 2,275,472 - -1.6 2,275,476 + -0.2 2,275,476 + -0.3 2,275,476 + +0.2 2,275,476 + -1.3 2,275,476 + -1.1 2,275,476 + -1.1
Or see this region's nucleotide sequence