Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_01490

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_01480 and OKGIIK_01485 are separated by 104 nucleotidesOKGIIK_01485 and OKGIIK_01490 are separated by 9 nucleotidesOKGIIK_01490 and OKGIIK_01495 are separated by 94 nucleotidesOKGIIK_01495 and cysK are separated by 185 nucleotides OKGIIK_01480: OKGIIK_01480 - Protein-glutamate O-methyltransferase, at 331,934 to 335,494 _01480 OKGIIK_01485: OKGIIK_01485 - Aminopeptidase P family protein, at 335,599 to 336,261 _01485 OKGIIK_01490: OKGIIK_01490 - hypothetical protein, at 336,271 to 336,630 _01490 OKGIIK_01495: OKGIIK_01495 - L-isoleucine-4-hydroxylase, at 336,725 to 337,444 _01495 OKGIIK_01500: cysK - cysteine synthase A, at 337,630 to 338,646 cysK Position (kb) 336 337Strain fitness (log2 ratio) -2 -1 0 1 2 3at 335.435 kb on + strandat 335.435 kb on + strandat 335.436 kb on - strandat 335.540 kb on + strandat 335.540 kb on + strandat 335.540 kb on + strandat 335.540 kb on + strandat 335.540 kb on + strandat 335.541 kb on - strandat 335.541 kb on - strandat 335.668 kb on + strand, within OKGIIK_01485at 335.669 kb on - strand, within OKGIIK_01485at 335.669 kb on - strand, within OKGIIK_01485at 335.725 kb on + strand, within OKGIIK_01485at 335.725 kb on + strand, within OKGIIK_01485at 335.726 kb on - strand, within OKGIIK_01485at 335.726 kb on - strand, within OKGIIK_01485at 335.817 kb on - strand, within OKGIIK_01485at 335.817 kb on - strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.984 kb on + strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 335.985 kb on - strand, within OKGIIK_01485at 336.032 kb on + strand, within OKGIIK_01485at 336.032 kb on + strand, within OKGIIK_01485at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.356 kb on + strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.357 kb on - strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.464 kb on + strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.465 kb on - strand, within OKGIIK_01490at 336.665 kb on + strandat 336.666 kb on - strandat 336.689 kb on + strandat 336.689 kb on + strandat 336.689 kb on + strandat 336.689 kb on + strandat 336.689 kb on + strandat 336.689 kb on + strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.690 kb on - strandat 336.901 kb on + strand, within OKGIIK_01495at 336.901 kb on + strand, within OKGIIK_01495at 336.901 kb on + strand, within OKGIIK_01495at 336.901 kb on + strand, within OKGIIK_01495at 336.901 kb on + strand, within OKGIIK_01495at 336.901 kb on + strand, within OKGIIK_01495at 336.902 kb on - strand, within OKGIIK_01495at 336.902 kb on - strand, within OKGIIK_01495at 336.902 kb on - strand, within OKGIIK_01495at 336.902 kb on - strand, within OKGIIK_01495at 336.948 kb on + strand, within OKGIIK_01495at 336.948 kb on + strand, within OKGIIK_01495at 336.948 kb on + strand, within OKGIIK_01495at 336.949 kb on - strand, within OKGIIK_01495at 336.949 kb on - strand, within OKGIIK_01495at 336.949 kb on - strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.091 kb on + strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.092 kb on - strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.176 kb on + strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.177 kb on - strand, within OKGIIK_01495at 337.191 kb on + strand, within OKGIIK_01495at 337.192 kb on - strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.284 kb on + strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.285 kb on - strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.288 kb on + strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.289 kb on - strand, within OKGIIK_01495at 337.450 kb on + strandat 337.450 kb on + strandat 337.450 kb on + strandat 337.450 kb on + strandat 337.451 kb on - strandat 337.455 kb on + strandat 337.456 kb on - strandat 337.456 kb on - strandat 337.507 kb on + strandat 337.507 kb on + strandat 337.508 kb on - strandat 337.508 kb on - strandat 337.605 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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335,435 + +0.5
335,435 + -0.1
335,436 - -1.9
335,540 + +1.8
335,540 + -0.5
335,540 + -0.9
335,540 + -0.1
335,540 + -2.7
335,541 - +0.0
335,541 - -1.0
335,668 + OKGIIK_01485 0.10 -1.7
335,669 - OKGIIK_01485 0.11 +0.2
335,669 - OKGIIK_01485 0.11 -0.3
335,725 + OKGIIK_01485 0.19 +0.1
335,725 + OKGIIK_01485 0.19 -0.3
335,726 - OKGIIK_01485 0.19 +0.7
335,726 - OKGIIK_01485 0.19 -1.3
335,817 - OKGIIK_01485 0.33 +1.5
335,817 - OKGIIK_01485 0.33 -1.3
335,984 + OKGIIK_01485 0.58 +1.1
335,984 + OKGIIK_01485 0.58 -0.9
335,984 + OKGIIK_01485 0.58 +0.8
335,984 + OKGIIK_01485 0.58 +0.7
335,984 + OKGIIK_01485 0.58 +0.7
335,984 + OKGIIK_01485 0.58 -1.3
335,984 + OKGIIK_01485 0.58 +0.2
335,984 + OKGIIK_01485 0.58 -1.2
335,984 + OKGIIK_01485 0.58 -1.6
335,984 + OKGIIK_01485 0.58 -1.2
335,984 + OKGIIK_01485 0.58 +0.9
335,984 + OKGIIK_01485 0.58 -1.1
335,984 + OKGIIK_01485 0.58 +0.8
335,984 + OKGIIK_01485 0.58 -0.7
335,984 + OKGIIK_01485 0.58 -1.6
335,984 + OKGIIK_01485 0.58 -2.2
335,984 + OKGIIK_01485 0.58 -0.8
335,984 + OKGIIK_01485 0.58 -1.6
335,985 - OKGIIK_01485 0.58 -0.5
335,985 - OKGIIK_01485 0.58 -0.3
335,985 - OKGIIK_01485 0.58 -1.1
335,985 - OKGIIK_01485 0.58 -0.3
335,985 - OKGIIK_01485 0.58 -1.5
335,985 - OKGIIK_01485 0.58 -0.6
335,985 - OKGIIK_01485 0.58 -1.3
335,985 - OKGIIK_01485 0.58 -0.3
335,985 - OKGIIK_01485 0.58 -1.5
335,985 - OKGIIK_01485 0.58 -1.0
335,985 - OKGIIK_01485 0.58 -0.9
335,985 - OKGIIK_01485 0.58 -1.8
335,985 - OKGIIK_01485 0.58 -0.6
336,032 + OKGIIK_01485 0.65 +1.6
336,032 + OKGIIK_01485 0.65 -1.1
336,356 + OKGIIK_01490 0.24 -0.9
336,356 + OKGIIK_01490 0.24 -1.3
336,356 + OKGIIK_01490 0.24 +1.0
336,356 + OKGIIK_01490 0.24 -0.8
336,356 + OKGIIK_01490 0.24 -1.6
336,356 + OKGIIK_01490 0.24 -1.6
336,356 + OKGIIK_01490 0.24 -0.6
336,356 + OKGIIK_01490 0.24 -0.8
336,357 - OKGIIK_01490 0.24 -1.2
336,357 - OKGIIK_01490 0.24 -0.3
336,357 - OKGIIK_01490 0.24 -1.6
336,357 - OKGIIK_01490 0.24 -1.0
336,357 - OKGIIK_01490 0.24 -2.2
336,357 - OKGIIK_01490 0.24 +0.0
336,357 - OKGIIK_01490 0.24 +0.2
336,357 - OKGIIK_01490 0.24 -1.5
336,464 + OKGIIK_01490 0.54 -1.8
336,464 + OKGIIK_01490 0.54 +0.2
336,464 + OKGIIK_01490 0.54 +0.2
336,464 + OKGIIK_01490 0.54 -1.1
336,464 + OKGIIK_01490 0.54 -1.3
336,464 + OKGIIK_01490 0.54 -1.3
336,464 + OKGIIK_01490 0.54 -2.5
336,464 + OKGIIK_01490 0.54 -0.3
336,465 - OKGIIK_01490 0.54 +3.2
336,465 - OKGIIK_01490 0.54 -1.9
336,465 - OKGIIK_01490 0.54 -1.6
336,465 - OKGIIK_01490 0.54 +1.5
336,465 - OKGIIK_01490 0.54 -0.8
336,465 - OKGIIK_01490 0.54 -0.5
336,465 - OKGIIK_01490 0.54 -0.7
336,465 - OKGIIK_01490 0.54 -0.8
336,465 - OKGIIK_01490 0.54 -1.6
336,465 - OKGIIK_01490 0.54 -1.8
336,465 - OKGIIK_01490 0.54 +0.8
336,465 - OKGIIK_01490 0.54 -1.0
336,465 - OKGIIK_01490 0.54 +2.0
336,665 + -0.8
336,666 - -0.9
336,689 + +0.7
336,689 + -1.5
336,689 + +0.6
336,689 + +1.8
336,689 + -0.3
336,689 + +0.3
336,690 - -1.8
336,690 - -0.6
336,690 - +0.2
336,690 - +0.0
336,690 - +1.2
336,690 - -1.6
336,690 - +0.9
336,690 - +2.1
336,690 - -0.3
336,690 - -0.5
336,690 - -1.3
336,901 + OKGIIK_01495 0.24 -1.1
336,901 + OKGIIK_01495 0.24 -1.2
336,901 + OKGIIK_01495 0.24 -0.8
336,901 + OKGIIK_01495 0.24 +0.1
336,901 + OKGIIK_01495 0.24 +1.2
336,901 + OKGIIK_01495 0.24 -1.3
336,902 - OKGIIK_01495 0.25 -0.8
336,902 - OKGIIK_01495 0.25 -1.2
336,902 - OKGIIK_01495 0.25 -0.8
336,902 - OKGIIK_01495 0.25 -0.8
336,948 + OKGIIK_01495 0.31 -0.4
336,948 + OKGIIK_01495 0.31 +0.5
336,948 + OKGIIK_01495 0.31 -0.2
336,949 - OKGIIK_01495 0.31 -0.1
336,949 - OKGIIK_01495 0.31 -0.1
336,949 - OKGIIK_01495 0.31 -0.5
337,091 + OKGIIK_01495 0.51 -1.6
337,091 + OKGIIK_01495 0.51 -0.8
337,091 + OKGIIK_01495 0.51 -2.1
337,091 + OKGIIK_01495 0.51 -0.1
337,091 + OKGIIK_01495 0.51 +0.4
337,091 + OKGIIK_01495 0.51 -0.9
337,092 - OKGIIK_01495 0.51 +0.1
337,092 - OKGIIK_01495 0.51 +0.7
337,092 - OKGIIK_01495 0.51 -1.1
337,092 - OKGIIK_01495 0.51 -1.0
337,092 - OKGIIK_01495 0.51 -0.9
337,092 - OKGIIK_01495 0.51 +0.6
337,092 - OKGIIK_01495 0.51 -0.8
337,092 - OKGIIK_01495 0.51 -1.6
337,092 - OKGIIK_01495 0.51 -0.5
337,092 - OKGIIK_01495 0.51 +0.1
337,176 + OKGIIK_01495 0.63 -1.6
337,176 + OKGIIK_01495 0.63 -1.1
337,176 + OKGIIK_01495 0.63 -0.8
337,176 + OKGIIK_01495 0.63 +1.2
337,176 + OKGIIK_01495 0.63 +0.2
337,176 + OKGIIK_01495 0.63 -1.1
337,176 + OKGIIK_01495 0.63 -0.1
337,177 - OKGIIK_01495 0.63 -0.5
337,177 - OKGIIK_01495 0.63 +1.0
337,177 - OKGIIK_01495 0.63 +0.2
337,177 - OKGIIK_01495 0.63 -0.3
337,177 - OKGIIK_01495 0.63 -1.6
337,177 - OKGIIK_01495 0.63 -1.6
337,191 + OKGIIK_01495 0.65 +0.6
337,192 - OKGIIK_01495 0.65 +0.1
337,284 + OKGIIK_01495 0.78 +1.1
337,284 + OKGIIK_01495 0.78 +1.2
337,284 + OKGIIK_01495 0.78 -1.8
337,284 + OKGIIK_01495 0.78 +1.6
337,284 + OKGIIK_01495 0.78 +1.7
337,284 + OKGIIK_01495 0.78 -1.3
337,284 + OKGIIK_01495 0.78 -0.4
337,284 + OKGIIK_01495 0.78 +0.7
337,284 + OKGIIK_01495 0.78 +0.6
337,284 + OKGIIK_01495 0.78 -0.3
337,284 + OKGIIK_01495 0.78 -1.2
337,284 + OKGIIK_01495 0.78 -0.5
337,284 + OKGIIK_01495 0.78 +2.6
337,284 + OKGIIK_01495 0.78 -0.3
337,285 - OKGIIK_01495 0.78 -0.3
337,285 - OKGIIK_01495 0.78 -0.6
337,285 - OKGIIK_01495 0.78 -0.2
337,285 - OKGIIK_01495 0.78 -0.3
337,285 - OKGIIK_01495 0.78 -1.1
337,285 - OKGIIK_01495 0.78 -0.2
337,285 - OKGIIK_01495 0.78 +0.8
337,285 - OKGIIK_01495 0.78 -1.1
337,285 - OKGIIK_01495 0.78 -2.3
337,285 - OKGIIK_01495 0.78 -0.9
337,285 - OKGIIK_01495 0.78 -1.2
337,285 - OKGIIK_01495 0.78 +1.2
337,285 - OKGIIK_01495 0.78 -1.7
337,285 - OKGIIK_01495 0.78 +0.8
337,285 - OKGIIK_01495 0.78 +1.2
337,285 - OKGIIK_01495 0.78 +0.7
337,285 - OKGIIK_01495 0.78 -0.8
337,285 - OKGIIK_01495 0.78 -0.3
337,285 - OKGIIK_01495 0.78 -0.9
337,285 - OKGIIK_01495 0.78 -1.3
337,288 + OKGIIK_01495 0.78 -0.3
337,288 + OKGIIK_01495 0.78 -0.8
337,288 + OKGIIK_01495 0.78 -0.4
337,288 + OKGIIK_01495 0.78 +0.5
337,288 + OKGIIK_01495 0.78 -1.3
337,288 + OKGIIK_01495 0.78 -0.9
337,289 - OKGIIK_01495 0.78 -0.7
337,289 - OKGIIK_01495 0.78 +1.8
337,289 - OKGIIK_01495 0.78 +1.0
337,289 - OKGIIK_01495 0.78 -0.3
337,289 - OKGIIK_01495 0.78 +1.8
337,289 - OKGIIK_01495 0.78 +0.0
337,289 - OKGIIK_01495 0.78 -1.1
337,289 - OKGIIK_01495 0.78 +0.2
337,289 - OKGIIK_01495 0.78 -1.6
337,289 - OKGIIK_01495 0.78 -0.1
337,450 + +1.2
337,450 + +0.7
337,450 + +0.2
337,450 + +0.8
337,451 - -1.3
337,455 + +0.5
337,456 - -2.5
337,456 - -1.4
337,507 + -1.5
337,507 + +1.2
337,508 - -2.2
337,508 - +0.2
337,605 + +0.7

Or see this region's nucleotide sequence