Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03762

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03761 and MPMX19_03762 are separated by 191 nucleotidesMPMX19_03762 and MPMX19_03763 overlap by 11 nucleotides MPMX19_03761: MPMX19_03761 - hypothetical protein, at 1 to 945 _03761 MPMX19_03762: MPMX19_03762 - hypothetical protein, at 1,137 to 2,159 _03762 MPMX19_03763: MPMX19_03763 - Nucleoid occlusion protein, at 2,149 to 3,003 _03763 Position (kb) 1 2 3Strain fitness (log2 ratio) -3 -2 -1 0 1at 1.095 kb on + strandat 3.012 kb on - strandat 3.012 kb on - strandat 3.012 kb on - strandat 3.012 kb on - strandat 3.076 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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1,095 + -0.8
3,012 - -2.8
3,012 - -0.9
3,012 - -0.7
3,012 - -0.7
3,076 + -0.3

Or see this region's nucleotide sequence