Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06143 and MPMX19_06144 are separated by 86 nucleotides MPMX19_06144 and MPMX19_06145 are separated by 12 nucleotides MPMX19_06145 and MPMX19_06146 are separated by 246 nucleotides MPMX19_06146 and MPMX19_06147 are separated by 4 nucleotides MPMX19_06147 and MPMX19_06148 are separated by 22 nucleotides
MPMX19_06143: MPMX19_06143 - Endonuclease III, at 330,732 to 331,412
_06143
MPMX19_06144: MPMX19_06144 - hypothetical protein, at 331,499 to 331,729
_06144
MPMX19_06145: MPMX19_06145 - hypothetical protein, at 331,742 to 332,728
_06145
MPMX19_06146: MPMX19_06146 - hypothetical protein, at 332,975 to 333,265
_06146
MPMX19_06147: MPMX19_06147 - hypothetical protein, at 333,270 to 333,698
_06147
MPMX19_06148: MPMX19_06148 - Beta-glucosidase A, at 333,721 to 335,208
_06148
Position (kb) 331
332
333 Strain fitness (log2 ratio) -2
-1
0
1 at 330.849 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.221 kb on + strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.222 kb on - strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.284 kb on + strand, within MPMX19_06143 at 331.459 kb on + strand at 331.459 kb on + strand at 331.459 kb on + strand at 331.460 kb on - strand at 331.460 kb on - strand at 331.460 kb on - strand at 331.508 kb on + strand at 331.508 kb on + strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.509 kb on - strand at 331.568 kb on + strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144 at 331.569 kb on - strand, within MPMX19_06144 at 332.797 kb on + strand at 332.797 kb on + strand at 332.797 kb on + strand at 332.797 kb on + strand at 332.797 kb on + strand at 332.797 kb on + strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.798 kb on - strand at 332.808 kb on + strand at 332.808 kb on + strand at 332.808 kb on + strand at 332.809 kb on - strand at 332.935 kb on - strand at 333.122 kb on + strand, within MPMX19_06146 at 333.122 kb on + strand, within MPMX19_06146 at 333.122 kb on + strand, within MPMX19_06146 at 333.122 kb on + strand, within MPMX19_06146 at 333.122 kb on + strand, within MPMX19_06146 at 333.123 kb on - strand, within MPMX19_06146 at 333.123 kb on - strand, within MPMX19_06146 at 333.123 kb on - strand, within MPMX19_06146 at 333.251 kb on + strand at 333.251 kb on + strand at 333.251 kb on + strand at 333.252 kb on - strand at 333.252 kb on - strand at 333.252 kb on - strand at 333.252 kb on - strand at 333.271 kb on + strand at 333.271 kb on + strand at 333.271 kb on + strand at 333.271 kb on + strand at 333.271 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.295 kb on + strand at 333.296 kb on - strand at 333.296 kb on - strand at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.340 kb on + strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.341 kb on - strand, within MPMX19_06147 at 333.472 kb on + strand, within MPMX19_06147 at 333.472 kb on + strand, within MPMX19_06147 at 333.472 kb on + strand, within MPMX19_06147 at 333.472 kb on + strand, within MPMX19_06147 at 333.473 kb on - strand, within MPMX19_06147 at 333.473 kb on - strand, within MPMX19_06147 at 333.473 kb on - strand, within MPMX19_06147 at 333.511 kb on + strand, within MPMX19_06147 at 333.512 kb on - strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.529 kb on + strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.530 kb on - strand, within MPMX19_06147 at 333.553 kb on + strand, within MPMX19_06147 at 333.553 kb on + strand, within MPMX19_06147 at 333.553 kb on + strand, within MPMX19_06147 at 333.553 kb on + strand, within MPMX19_06147 at 333.554 kb on - strand, within MPMX19_06147 at 333.554 kb on - strand, within MPMX19_06147 at 333.709 kb on + strand at 333.709 kb on + strand at 333.710 kb on - strand at 333.710 kb on - strand at 333.710 kb on - strand at 333.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 330,849 + MPMX19_06143 0.17 -1.0 331,221 + MPMX19_06143 0.72 -1.3 331,221 + MPMX19_06143 0.72 -1.1 331,221 + MPMX19_06143 0.72 +0.1 331,221 + MPMX19_06143 0.72 -0.4 331,221 + MPMX19_06143 0.72 -0.7 331,221 + MPMX19_06143 0.72 -0.1 331,222 - MPMX19_06143 0.72 -0.9 331,222 - MPMX19_06143 0.72 -0.1 331,222 - MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -0.7 331,222 - MPMX19_06143 0.72 +0.7 331,222 - MPMX19_06143 0.72 -0.6 331,222 - MPMX19_06143 0.72 +0.6 331,222 - MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -0.5 331,222 - MPMX19_06143 0.72 -1.4 331,222 - MPMX19_06143 0.72 -1.1 331,222 - MPMX19_06143 0.72 -2.0 331,222 - MPMX19_06143 0.72 -0.2 331,222 - MPMX19_06143 0.72 +0.0 331,222 - MPMX19_06143 0.72 +0.1 331,222 - MPMX19_06143 0.72 -2.4 331,222 - MPMX19_06143 0.72 -1.3 331,284 + MPMX19_06143 0.81 +0.9 331,284 + MPMX19_06143 0.81 -0.3 331,284 + MPMX19_06143 0.81 +0.1 331,459 + -0.9 331,459 + -0.9 331,459 + +0.9 331,460 - -0.8 331,460 - -0.4 331,460 - +0.6 331,508 + -0.0 331,508 + -0.1 331,509 - -1.0 331,509 - -0.9 331,509 - -0.6 331,509 - -0.5 331,509 - -0.1 331,568 + MPMX19_06144 0.30 -0.5 331,569 - MPMX19_06144 0.30 -0.6 331,569 - MPMX19_06144 0.30 -1.3 331,569 - MPMX19_06144 0.30 -0.7 332,797 + -0.2 332,797 + +0.4 332,797 + -0.3 332,797 + -0.9 332,797 + +0.3 332,797 + -1.8 332,798 - -1.0 332,798 - -1.3 332,798 - -1.7 332,798 - -0.7 332,798 - -0.3 332,798 - -1.0 332,798 - -0.5 332,798 - -0.3 332,798 - -1.8 332,808 + -0.6 332,808 + +0.1 332,808 + +0.9 332,809 - -0.7 332,935 - -1.6 333,122 + MPMX19_06146 0.51 -0.3 333,122 + MPMX19_06146 0.51 +0.7 333,122 + MPMX19_06146 0.51 -1.6 333,122 + MPMX19_06146 0.51 -1.0 333,122 + MPMX19_06146 0.51 -1.0 333,123 - MPMX19_06146 0.51 +0.6 333,123 - MPMX19_06146 0.51 +0.7 333,123 - MPMX19_06146 0.51 -1.9 333,251 + +0.7 333,251 + +1.0 333,251 + -0.0 333,252 - -0.7 333,252 - -0.0 333,252 - -0.4 333,252 - -0.5 333,271 + -0.5 333,271 + -0.4 333,271 + -1.3 333,271 + -0.1 333,271 + -1.0 333,295 + -1.1 333,295 + -0.9 333,295 + -0.9 333,295 + -0.0 333,295 + -0.4 333,295 + -1.2 333,295 + -0.6 333,295 + -0.2 333,295 + -0.8 333,295 + -0.6 333,296 - -0.9 333,296 - -0.4 333,340 + MPMX19_06147 0.16 +0.7 333,340 + MPMX19_06147 0.16 +0.4 333,340 + MPMX19_06147 0.16 -0.1 333,340 + MPMX19_06147 0.16 -0.7 333,340 + MPMX19_06147 0.16 -0.5 333,340 + MPMX19_06147 0.16 -1.3 333,340 + MPMX19_06147 0.16 -1.3 333,340 + MPMX19_06147 0.16 -1.6 333,340 + MPMX19_06147 0.16 -0.1 333,340 + MPMX19_06147 0.16 +0.1 333,340 + MPMX19_06147 0.16 -1.5 333,340 + MPMX19_06147 0.16 -0.9 333,341 - MPMX19_06147 0.17 -0.7 333,341 - MPMX19_06147 0.17 -1.3 333,341 - MPMX19_06147 0.17 -1.9 333,341 - MPMX19_06147 0.17 -0.7 333,341 - MPMX19_06147 0.17 -0.7 333,341 - MPMX19_06147 0.17 -1.3 333,341 - MPMX19_06147 0.17 -0.0 333,341 - MPMX19_06147 0.17 +0.9 333,341 - MPMX19_06147 0.17 +0.1 333,341 - MPMX19_06147 0.17 +0.7 333,341 - MPMX19_06147 0.17 +0.3 333,341 - MPMX19_06147 0.17 +0.4 333,341 - MPMX19_06147 0.17 +0.7 333,341 - MPMX19_06147 0.17 -2.2 333,341 - MPMX19_06147 0.17 -0.3 333,341 - MPMX19_06147 0.17 -1.0 333,341 - MPMX19_06147 0.17 +0.6 333,341 - MPMX19_06147 0.17 +0.1 333,341 - MPMX19_06147 0.17 +1.1 333,472 + MPMX19_06147 0.47 -1.0 333,472 + MPMX19_06147 0.47 +0.3 333,472 + MPMX19_06147 0.47 -1.9 333,472 + MPMX19_06147 0.47 -1.6 333,473 - MPMX19_06147 0.47 -1.1 333,473 - MPMX19_06147 0.47 -0.4 333,473 - MPMX19_06147 0.47 -1.4 333,511 + MPMX19_06147 0.56 -1.6 333,512 - MPMX19_06147 0.56 -0.6 333,529 + MPMX19_06147 0.60 +1.2 333,529 + MPMX19_06147 0.60 +0.6 333,529 + MPMX19_06147 0.60 +0.6 333,529 + MPMX19_06147 0.60 +0.2 333,529 + MPMX19_06147 0.60 -0.9 333,529 + MPMX19_06147 0.60 +0.1 333,529 + MPMX19_06147 0.60 -0.9 333,529 + MPMX19_06147 0.60 -0.3 333,530 - MPMX19_06147 0.61 -0.7 333,530 - MPMX19_06147 0.61 +1.0 333,530 - MPMX19_06147 0.61 -1.4 333,530 - MPMX19_06147 0.61 -1.4 333,530 - MPMX19_06147 0.61 +0.3 333,530 - MPMX19_06147 0.61 +1.4 333,530 - MPMX19_06147 0.61 -1.5 333,530 - MPMX19_06147 0.61 -1.0 333,553 + MPMX19_06147 0.66 -1.0 333,553 + MPMX19_06147 0.66 +0.1 333,553 + MPMX19_06147 0.66 -0.1 333,553 + MPMX19_06147 0.66 -0.1 333,554 - MPMX19_06147 0.66 -1.3 333,554 - MPMX19_06147 0.66 -0.7 333,709 + +1.1 333,709 + -0.4 333,710 - +1.0 333,710 - -0.6 333,710 - -0.7 333,710 - -2.0
Or see this region's nucleotide sequence