Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03058 and MPMX19_03059 are separated by 238 nucleotides MPMX19_03059 and MPMX19_03060 are separated by 13 nucleotides MPMX19_03060 and MPMX19_03061 overlap by 14 nucleotides MPMX19_03061 and MPMX19_03062 are separated by 59 nucleotides
MPMX19_03058: MPMX19_03058 - hypothetical protein, at 322,374 to 324,695
_03058
MPMX19_03059: MPMX19_03059 - hypothetical protein, at 324,934 to 325,161
_03059
MPMX19_03060: MPMX19_03060 - Ferredoxin-type protein NapF, at 325,175 to 325,720
_03060
MPMX19_03061: MPMX19_03061 - Chaperone NapD, at 325,707 to 326,009
_03061
MPMX19_03062: MPMX19_03062 - Periplasmic nitrate reductase, at 326,069 to 328,561
_03062
Position (kb) 324
325
326 Strain fitness (log2 ratio) -2
-1
0
1 at 324.250 kb on + strand, within MPMX19_03058 at 324.250 kb on + strand, within MPMX19_03058 at 324.250 kb on + strand, within MPMX19_03058 at 324.250 kb on + strand, within MPMX19_03058 at 324.250 kb on + strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.251 kb on - strand, within MPMX19_03058 at 324.421 kb on + strand, within MPMX19_03058 at 324.422 kb on - strand, within MPMX19_03058 at 324.422 kb on - strand, within MPMX19_03058 at 324.422 kb on - strand, within MPMX19_03058 at 324.451 kb on + strand, within MPMX19_03058 at 324.451 kb on + strand, within MPMX19_03058 at 324.451 kb on + strand, within MPMX19_03058 at 324.452 kb on - strand, within MPMX19_03058 at 324.452 kb on - strand, within MPMX19_03058 at 324.538 kb on + strand at 324.538 kb on + strand at 324.538 kb on + strand at 324.538 kb on + strand at 324.539 kb on - strand at 324.539 kb on - strand at 324.539 kb on - strand at 324.645 kb on + strand at 324.645 kb on + strand at 324.645 kb on + strand at 324.646 kb on - strand at 324.646 kb on - strand at 324.646 kb on - strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.843 kb on + strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 324.844 kb on - strand at 325.100 kb on - strand, within MPMX19_03059 at 325.191 kb on + strand at 325.191 kb on + strand at 325.191 kb on + strand at 325.192 kb on - strand at 325.192 kb on - strand at 325.206 kb on + strand at 325.207 kb on - strand at 325.290 kb on - strand, within MPMX19_03060 at 325.723 kb on + strand at 325.723 kb on + strand at 325.723 kb on + strand at 325.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 324,250 + MPMX19_03058 0.81 -0.7 324,250 + MPMX19_03058 0.81 -0.7 324,250 + MPMX19_03058 0.81 +0.5 324,250 + MPMX19_03058 0.81 -0.3 324,250 + MPMX19_03058 0.81 -1.7 324,251 - MPMX19_03058 0.81 -2.5 324,251 - MPMX19_03058 0.81 -0.0 324,251 - MPMX19_03058 0.81 -0.6 324,251 - MPMX19_03058 0.81 -0.6 324,251 - MPMX19_03058 0.81 +0.4 324,251 - MPMX19_03058 0.81 +0.1 324,251 - MPMX19_03058 0.81 -1.4 324,421 + MPMX19_03058 0.88 -1.0 324,422 - MPMX19_03058 0.88 +1.4 324,422 - MPMX19_03058 0.88 +0.6 324,422 - MPMX19_03058 0.88 -0.5 324,451 + MPMX19_03058 0.89 +0.6 324,451 + MPMX19_03058 0.89 -1.5 324,451 + MPMX19_03058 0.89 +0.9 324,452 - MPMX19_03058 0.89 -0.9 324,452 - MPMX19_03058 0.89 -1.0 324,538 + +0.4 324,538 + -1.3 324,538 + -0.6 324,538 + +0.2 324,539 - -1.2 324,539 - +0.4 324,539 - -0.3 324,645 + -0.7 324,645 + -1.9 324,645 + -0.5 324,646 - -0.6 324,646 - +0.3 324,646 - -0.7 324,843 + -2.1 324,843 + +1.1 324,843 + -1.9 324,843 + -0.6 324,843 + -0.8 324,843 + +1.0 324,843 + -0.6 324,843 + -1.9 324,843 + -0.0 324,843 + -1.1 324,843 + -0.0 324,844 - -0.6 324,844 - -0.3 324,844 - -1.4 324,844 - -1.3 324,844 - -1.0 324,844 - +1.4 324,844 - -1.5 324,844 - +0.4 324,844 - -0.4 325,100 - MPMX19_03059 0.73 -2.3 325,191 + -0.4 325,191 + -1.6 325,191 + +0.4 325,192 - -1.4 325,192 - -0.6 325,206 + -0.4 325,207 - +0.6 325,290 - MPMX19_03060 0.21 -1.1 325,723 + -1.9 325,723 + -1.0 325,723 + -0.3 325,724 - -1.2
Or see this region's nucleotide sequence