Experiment: R2A with Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS21690 and CA265_RS21695 are separated by 14 nucleotides CA265_RS21695 and CA265_RS21700 are separated by 470 nucleotides CA265_RS21700 and CA265_RS21705 are separated by 341 nucleotides
CA265_RS21690: CA265_RS21690 - hypothetical protein, at 5,335,562 to 5,336,620
_RS21690
CA265_RS21695: CA265_RS21695 - preprotein translocase subunit SecG, at 5,336,635 to 5,336,997
_RS21695
CA265_RS21700: CA265_RS21700 - two-component sensor histidine kinase, at 5,337,468 to 5,338,493
_RS21700
CA265_RS21705: CA265_RS21705 - phosphate transport regulator, at 5,338,835 to 5,339,482
_RS21705
Position (kb) 5337
5338
5339 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5336.469 kb on - strand, within CA265_RS21690 at 5336.536 kb on + strand at 5336.537 kb on - strand at 5336.537 kb on - strand at 5336.540 kb on + strand at 5336.995 kb on + strand at 5337.002 kb on + strand at 5337.002 kb on + strand at 5337.003 kb on - strand at 5337.017 kb on + strand at 5337.092 kb on + strand at 5337.092 kb on + strand at 5337.092 kb on + strand at 5337.128 kb on - strand at 5337.132 kb on + strand at 5337.174 kb on + strand at 5337.175 kb on - strand at 5337.175 kb on - strand at 5337.245 kb on + strand at 5337.290 kb on + strand at 5337.290 kb on + strand at 5337.339 kb on + strand at 5337.371 kb on - strand at 5337.371 kb on - strand at 5337.375 kb on + strand at 5337.376 kb on - strand at 5337.406 kb on - strand at 5337.448 kb on - strand at 5337.457 kb on + strand at 5337.555 kb on + strand at 5337.558 kb on + strand at 5337.558 kb on + strand at 5337.558 kb on + strand at 5337.558 kb on + strand at 5337.581 kb on - strand, within CA265_RS21700 at 5337.609 kb on + strand, within CA265_RS21700 at 5337.612 kb on + strand, within CA265_RS21700 at 5337.662 kb on + strand, within CA265_RS21700 at 5337.751 kb on + strand, within CA265_RS21700 at 5337.904 kb on + strand, within CA265_RS21700 at 5337.950 kb on + strand, within CA265_RS21700 at 5338.003 kb on + strand, within CA265_RS21700 at 5338.025 kb on + strand, within CA265_RS21700 at 5338.124 kb on + strand, within CA265_RS21700 at 5338.124 kb on + strand, within CA265_RS21700 at 5338.128 kb on + strand, within CA265_RS21700 at 5338.130 kb on + strand, within CA265_RS21700 at 5338.189 kb on + strand, within CA265_RS21700 at 5338.205 kb on + strand, within CA265_RS21700 at 5338.387 kb on + strand, within CA265_RS21700 at 5338.512 kb on + strand at 5338.540 kb on - strand at 5338.611 kb on + strand at 5338.672 kb on - strand at 5338.692 kb on - strand at 5338.705 kb on - strand at 5338.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Aluminum chloride 1 mM remove 5,336,469 - CA265_RS21690 0.86 -1.7 5,336,536 + +0.8 5,336,537 - -1.2 5,336,537 - -2.1 5,336,540 + -1.7 5,336,995 + +0.1 5,337,002 + -0.3 5,337,002 + -0.4 5,337,003 - +0.5 5,337,017 + +0.4 5,337,092 + +0.9 5,337,092 + -1.6 5,337,092 + +0.2 5,337,128 - -0.1 5,337,132 + -0.1 5,337,174 + +0.1 5,337,175 - -0.2 5,337,175 - +1.0 5,337,245 + +0.5 5,337,290 + -0.5 5,337,290 + -0.1 5,337,339 + -0.4 5,337,371 - +0.3 5,337,371 - +0.2 5,337,375 + -0.6 5,337,376 - +0.4 5,337,406 - -0.2 5,337,448 - +0.4 5,337,457 + +1.2 5,337,555 + -1.1 5,337,558 + -0.7 5,337,558 + -2.9 5,337,558 + -1.4 5,337,558 + -1.0 5,337,581 - CA265_RS21700 0.11 -0.9 5,337,609 + CA265_RS21700 0.14 -2.5 5,337,612 + CA265_RS21700 0.14 -1.1 5,337,662 + CA265_RS21700 0.19 -2.8 5,337,751 + CA265_RS21700 0.28 -2.5 5,337,904 + CA265_RS21700 0.42 -2.3 5,337,950 + CA265_RS21700 0.47 -1.5 5,338,003 + CA265_RS21700 0.52 +0.2 5,338,025 + CA265_RS21700 0.54 -0.8 5,338,124 + CA265_RS21700 0.64 -1.6 5,338,124 + CA265_RS21700 0.64 -0.3 5,338,128 + CA265_RS21700 0.64 -1.7 5,338,130 + CA265_RS21700 0.65 -1.9 5,338,189 + CA265_RS21700 0.70 -3.0 5,338,205 + CA265_RS21700 0.72 -2.6 5,338,387 + CA265_RS21700 0.90 -1.5 5,338,512 + -0.9 5,338,540 - -1.5 5,338,611 + -0.4 5,338,672 - -0.2 5,338,692 - +0.6 5,338,705 - -0.5 5,338,753 - +0.8
Or see this region's nucleotide sequence