Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS07710 and ABID97_RS07715 overlap by 4 nucleotides ABID97_RS07715 and ABID97_RS07720 are separated by 7 nucleotides ABID97_RS07720 and ABID97_RS07725 are separated by 61 nucleotides
ABID97_RS07710: ABID97_RS07710 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 1,624,826 to 1,625,794
_RS07710
ABID97_RS07715: ABID97_RS07715 - threonine/serine dehydratase, at 1,625,791 to 1,626,753
_RS07715
ABID97_RS07720: ABID97_RS07720 - VOC family protein, at 1,626,761 to 1,627,162
_RS07720
ABID97_RS07725: ABID97_RS07725 - serine--tRNA ligase, at 1,627,224 to 1,628,556
_RS07725
Position (kb)
1626
1627
1628 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1625.826 kb on - strand at 1626.190 kb on + strand, within ABID97_RS07715 at 1626.256 kb on + strand, within ABID97_RS07715 at 1626.256 kb on + strand, within ABID97_RS07715 at 1626.257 kb on - strand, within ABID97_RS07715 at 1626.362 kb on + strand, within ABID97_RS07715 at 1626.550 kb on + strand, within ABID97_RS07715 at 1626.550 kb on + strand, within ABID97_RS07715 at 1626.550 kb on + strand, within ABID97_RS07715 at 1626.550 kb on + strand, within ABID97_RS07715 at 1626.550 kb on + strand, within ABID97_RS07715 at 1626.551 kb on - strand, within ABID97_RS07715 at 1626.551 kb on - strand, within ABID97_RS07715 at 1626.679 kb on + strand at 1626.680 kb on - strand at 1626.680 kb on - strand at 1626.762 kb on + strand at 1626.763 kb on - strand at 1627.111 kb on - strand, within ABID97_RS07720 at 1627.111 kb on - strand, within ABID97_RS07720 at 1627.152 kb on + strand at 1627.153 kb on - strand at 1627.153 kb on - strand at 1627.202 kb on + strand at 1627.202 kb on + strand at 1627.202 kb on + strand at 1627.202 kb on + strand at 1627.203 kb on - strand at 1627.212 kb on + strand at 1627.213 kb on - strand at 1627.213 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 1,625,826 - -0.2 1,626,190 + ABID97_RS07715 0.41 +0.3 1,626,256 + ABID97_RS07715 0.48 -1.1 1,626,256 + ABID97_RS07715 0.48 +1.1 1,626,257 - ABID97_RS07715 0.48 -0.3 1,626,362 + ABID97_RS07715 0.59 +0.4 1,626,550 + ABID97_RS07715 0.79 -0.2 1,626,550 + ABID97_RS07715 0.79 +0.0 1,626,550 + ABID97_RS07715 0.79 +0.1 1,626,550 + ABID97_RS07715 0.79 -0.5 1,626,550 + ABID97_RS07715 0.79 -0.3 1,626,551 - ABID97_RS07715 0.79 -0.5 1,626,551 - ABID97_RS07715 0.79 -1.7 1,626,679 + +0.3 1,626,680 - -1.1 1,626,680 - -1.2 1,626,762 + +0.1 1,626,763 - -0.3 1,627,111 - ABID97_RS07720 0.87 -1.9 1,627,111 - ABID97_RS07720 0.87 -1.7 1,627,152 + +0.4 1,627,153 - +0.8 1,627,153 - +0.0 1,627,202 + +0.4 1,627,202 + -0.5 1,627,202 + -0.2 1,627,202 + +0.4 1,627,203 - -0.1 1,627,212 + -0.4 1,627,213 - +0.5 1,627,213 - -3.5
Or see this region's nucleotide sequence