Strain Fitness in Variovorax sp. OAS795 around ABID97_RS08235

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABID97_RS08225 and ABID97_RS08230 are separated by 19 nucleotidesABID97_RS08230 and ABID97_RS08235 overlap by 4 nucleotidesABID97_RS08235 and ABID97_RS08240 are separated by 63 nucleotides ABID97_RS08225: ABID97_RS08225 - hydroxymethylbilane synthase, at 1,729,744 to 1,730,649 _RS08225 ABID97_RS08230: ABID97_RS08230 - uroporphyrinogen-III synthase, at 1,730,669 to 1,731,457 _RS08230 ABID97_RS08235: ABID97_RS08235 - uroporphyrinogen-III C-methyltransferase, at 1,731,454 to 1,732,545 _RS08235 ABID97_RS08240: ABID97_RS08240 - heme biosynthesis HemY N-terminal domain-containing protein, at 1,732,609 to 1,733,892 _RS08240 Position (kb) 1731 1732 1733Strain fitness (log2 ratio) -1 0 1at 1732.574 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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1,732,574 + +0.0

Or see this region's nucleotide sequence