Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24330 and AO353_24335 are separated by 390 nucleotides AO353_24335 and AO353_24340 are separated by 106 nucleotides
AO353_24330: AO353_24330 - cystathionine beta-lyase, at 5,351,786 to 5,352,955
_24330
AO353_24335: AO353_24335 - L-asparagine permease, at 5,353,346 to 5,354,830
_24335
AO353_24340: AO353_24340 - TetR family transcriptional regulator, at 5,354,937 to 5,355,500
_24340
Position (kb)
5353
5354
5355 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5352.365 kb on + strand, within AO353_24330 at 5352.365 kb on + strand, within AO353_24330 at 5352.365 kb on + strand, within AO353_24330 at 5352.428 kb on - strand, within AO353_24330 at 5352.431 kb on + strand, within AO353_24330 at 5352.431 kb on + strand, within AO353_24330 at 5352.462 kb on - strand, within AO353_24330 at 5352.479 kb on + strand, within AO353_24330 at 5352.480 kb on - strand, within AO353_24330 at 5352.513 kb on + strand, within AO353_24330 at 5352.513 kb on + strand, within AO353_24330 at 5352.514 kb on - strand at 5352.514 kb on - strand, within AO353_24330 at 5352.524 kb on - strand, within AO353_24330 at 5352.545 kb on + strand, within AO353_24330 at 5352.546 kb on - strand, within AO353_24330 at 5352.560 kb on + strand, within AO353_24330 at 5352.560 kb on + strand, within AO353_24330 at 5352.561 kb on - strand, within AO353_24330 at 5352.561 kb on - strand, within AO353_24330 at 5352.561 kb on - strand, within AO353_24330 at 5352.573 kb on + strand, within AO353_24330 at 5352.574 kb on - strand, within AO353_24330 at 5352.636 kb on + strand, within AO353_24330 at 5352.636 kb on + strand, within AO353_24330 at 5352.637 kb on - strand, within AO353_24330 at 5352.686 kb on + strand, within AO353_24330 at 5352.686 kb on + strand, within AO353_24330 at 5352.687 kb on - strand, within AO353_24330 at 5352.697 kb on + strand, within AO353_24330 at 5352.697 kb on + strand, within AO353_24330 at 5352.697 kb on + strand, within AO353_24330 at 5352.698 kb on - strand, within AO353_24330 at 5352.698 kb on - strand, within AO353_24330 at 5352.698 kb on - strand, within AO353_24330 at 5352.698 kb on - strand, within AO353_24330 at 5352.698 kb on - strand, within AO353_24330 at 5352.801 kb on + strand, within AO353_24330 at 5352.801 kb on + strand, within AO353_24330 at 5352.801 kb on + strand, within AO353_24330 at 5352.801 kb on + strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.802 kb on - strand, within AO353_24330 at 5352.806 kb on - strand, within AO353_24330 at 5352.806 kb on - strand, within AO353_24330 at 5352.806 kb on - strand, within AO353_24330 at 5352.806 kb on - strand, within AO353_24330 at 5352.841 kb on + strand at 5352.842 kb on - strand at 5352.877 kb on + strand at 5352.878 kb on - strand at 5352.878 kb on - strand at 5352.878 kb on - strand at 5352.878 kb on - strand at 5352.878 kb on - strand at 5352.926 kb on + strand at 5352.945 kb on + strand at 5352.992 kb on + strand at 5352.997 kb on - strand at 5352.999 kb on + strand at 5353.482 kb on + strand at 5353.498 kb on + strand, within AO353_24335 at 5353.891 kb on - strand, within AO353_24335 at 5353.906 kb on - strand, within AO353_24335 at 5354.070 kb on + strand, within AO353_24335 at 5354.070 kb on + strand, within AO353_24335 at 5354.071 kb on - strand at 5354.165 kb on + strand, within AO353_24335 at 5354.213 kb on + strand, within AO353_24335 at 5354.332 kb on - strand, within AO353_24335 at 5354.420 kb on + strand, within AO353_24335 at 5354.420 kb on + strand, within AO353_24335 at 5354.420 kb on + strand, within AO353_24335 at 5354.421 kb on - strand, within AO353_24335 at 5354.421 kb on - strand, within AO353_24335 at 5354.493 kb on + strand, within AO353_24335 at 5354.708 kb on + strand at 5354.709 kb on - strand at 5354.709 kb on - strand at 5354.834 kb on - strand at 5354.855 kb on + strand at 5354.929 kb on + strand at 5354.943 kb on - strand at 5354.995 kb on - strand, within AO353_24340 at 5355.109 kb on + strand, within AO353_24340 at 5355.160 kb on + strand, within AO353_24340 at 5355.521 kb on + strand at 5355.523 kb on + strand at 5355.682 kb on + strand at 5355.709 kb on + strand at 5355.781 kb on + strand at 5355.781 kb on + strand at 5355.781 kb on + strand at 5355.781 kb on + strand at 5355.782 kb on - strand at 5355.819 kb on + strand at 5355.820 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 5,352,365 + AO353_24330 0.49 -0.4 5,352,365 + AO353_24330 0.49 +0.3 5,352,365 + AO353_24330 0.49 +1.6 5,352,428 - AO353_24330 0.55 -0.2 5,352,431 + AO353_24330 0.55 +0.3 5,352,431 + AO353_24330 0.55 -0.6 5,352,462 - AO353_24330 0.58 +1.1 5,352,479 + AO353_24330 0.59 -0.8 5,352,480 - AO353_24330 0.59 +0.2 5,352,513 + AO353_24330 0.62 +1.1 5,352,513 + AO353_24330 0.62 -0.2 5,352,514 - -1.4 5,352,514 - AO353_24330 0.62 -1.3 5,352,524 - AO353_24330 0.63 -0.6 5,352,545 + AO353_24330 0.65 -0.7 5,352,546 - AO353_24330 0.65 +0.6 5,352,560 + AO353_24330 0.66 -0.8 5,352,560 + AO353_24330 0.66 -1.4 5,352,561 - AO353_24330 0.66 +1.1 5,352,561 - AO353_24330 0.66 +0.2 5,352,561 - AO353_24330 0.66 -1.4 5,352,573 + AO353_24330 0.67 -0.6 5,352,574 - AO353_24330 0.67 -0.6 5,352,636 + AO353_24330 0.73 +1.0 5,352,636 + AO353_24330 0.73 -1.1 5,352,637 - AO353_24330 0.73 +0.3 5,352,686 + AO353_24330 0.77 -2.1 5,352,686 + AO353_24330 0.77 +0.5 5,352,687 - AO353_24330 0.77 +0.1 5,352,697 + AO353_24330 0.78 -2.0 5,352,697 + AO353_24330 0.78 -1.0 5,352,697 + AO353_24330 0.78 +1.1 5,352,698 - AO353_24330 0.78 +0.8 5,352,698 - AO353_24330 0.78 -0.3 5,352,698 - AO353_24330 0.78 +0.3 5,352,698 - AO353_24330 0.78 +0.1 5,352,698 - AO353_24330 0.78 +0.7 5,352,801 + AO353_24330 0.87 +0.1 5,352,801 + AO353_24330 0.87 -0.4 5,352,801 + AO353_24330 0.87 +0.7 5,352,801 + AO353_24330 0.87 -1.3 5,352,802 - AO353_24330 0.87 +0.7 5,352,802 - AO353_24330 0.87 -2.2 5,352,802 - AO353_24330 0.87 +0.5 5,352,802 - AO353_24330 0.87 +0.2 5,352,802 - AO353_24330 0.87 +1.1 5,352,802 - AO353_24330 0.87 -1.2 5,352,806 - AO353_24330 0.87 -1.1 5,352,806 - AO353_24330 0.87 +1.2 5,352,806 - AO353_24330 0.87 +0.8 5,352,806 - AO353_24330 0.87 +0.5 5,352,841 + -0.7 5,352,842 - +1.1 5,352,877 + -0.2 5,352,878 - +0.9 5,352,878 - -0.6 5,352,878 - +0.6 5,352,878 - +0.8 5,352,878 - -0.4 5,352,926 + +0.7 5,352,945 + -1.4 5,352,992 + -0.8 5,352,997 - -0.2 5,352,999 + -0.6 5,353,482 + +1.3 5,353,498 + AO353_24335 0.10 -1.9 5,353,891 - AO353_24335 0.37 -0.8 5,353,906 - AO353_24335 0.38 +0.6 5,354,070 + AO353_24335 0.49 +0.6 5,354,070 + AO353_24335 0.49 -2.0 5,354,071 - +0.6 5,354,165 + AO353_24335 0.55 -1.4 5,354,213 + AO353_24335 0.58 -0.6 5,354,332 - AO353_24335 0.66 -0.6 5,354,420 + AO353_24335 0.72 -2.0 5,354,420 + AO353_24335 0.72 +0.6 5,354,420 + AO353_24335 0.72 -1.5 5,354,421 - AO353_24335 0.72 -1.2 5,354,421 - AO353_24335 0.72 -0.6 5,354,493 + AO353_24335 0.77 -0.9 5,354,708 + +0.9 5,354,709 - -1.2 5,354,709 - +0.3 5,354,834 - -0.7 5,354,855 + +0.3 5,354,929 + -0.6 5,354,943 - +0.9 5,354,995 - AO353_24340 0.10 +0.3 5,355,109 + AO353_24340 0.30 -1.0 5,355,160 + AO353_24340 0.40 -0.7 5,355,521 + -0.2 5,355,523 + +0.8 5,355,682 + +0.6 5,355,709 + +1.1 5,355,781 + -1.4 5,355,781 + -0.2 5,355,781 + -3.5 5,355,781 + -1.0 5,355,782 - -0.4 5,355,819 + -0.3 5,355,820 - -0.5
Or see this region's nucleotide sequence