Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02370 and ABID97_RS02375 are separated by 300 nucleotides ABID97_RS02375 and ABID97_RS02380 overlap by 19 nucleotides ABID97_RS02380 and ABID97_RS02385 are separated by 173 nucleotides ABID97_RS02385 and ABID97_RS02390 are separated by 27 nucleotides
ABID97_RS02370: ABID97_RS02370 - LysR family transcriptional regulator, at 476,759 to 477,688
_RS02370
ABID97_RS02375: ABID97_RS02375 - anti-phage dCTP deaminase, at 477,989 to 479,488
_RS02375
ABID97_RS02380: ABID97_RS02380 - hypothetical protein, at 479,470 to 479,649
_RS02380
ABID97_RS02385: ABID97_RS02385 - peptidylprolyl isomerase, at 479,823 to 480,299
_RS02385
ABID97_RS02390: ABID97_RS02390 - CYTH and CHAD domain-containing protein, at 480,327 to 481,907
_RS02390
Position (kb) 477
478
479
480 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 477.215 kb on + strand, within ABID97_RS02370 at 477.216 kb on - strand, within ABID97_RS02370 at 477.216 kb on - strand, within ABID97_RS02370 at 477.216 kb on - strand, within ABID97_RS02370 at 477.216 kb on - strand, within ABID97_RS02370 at 477.216 kb on - strand, within ABID97_RS02370 at 477.272 kb on + strand, within ABID97_RS02370 at 477.272 kb on + strand, within ABID97_RS02370 at 477.272 kb on + strand, within ABID97_RS02370 at 477.272 kb on + strand, within ABID97_RS02370 at 477.272 kb on + strand, within ABID97_RS02370 at 477.273 kb on - strand, within ABID97_RS02370 at 477.273 kb on - strand, within ABID97_RS02370 at 477.273 kb on - strand, within ABID97_RS02370 at 477.273 kb on - strand, within ABID97_RS02370 at 477.542 kb on + strand, within ABID97_RS02370 at 477.543 kb on - strand, within ABID97_RS02370 at 477.575 kb on + strand, within ABID97_RS02370 at 477.576 kb on - strand, within ABID97_RS02370 at 477.657 kb on + strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.658 kb on - strand at 477.666 kb on + strand at 477.666 kb on + strand at 477.666 kb on + strand at 477.667 kb on - strand at 477.686 kb on + strand at 477.686 kb on + strand at 477.686 kb on + strand at 477.687 kb on - strand at 477.687 kb on - strand at 477.687 kb on - strand at 477.719 kb on + strand at 477.720 kb on - strand at 477.720 kb on - strand at 477.720 kb on - strand at 477.720 kb on - strand at 477.739 kb on + strand at 477.739 kb on + strand at 477.768 kb on + strand at 477.768 kb on + strand at 477.885 kb on + strand at 477.885 kb on + strand at 477.885 kb on + strand at 477.886 kb on - strand at 477.886 kb on - strand at 477.886 kb on - strand at 477.886 kb on - strand at 477.908 kb on - strand at 477.990 kb on + strand at 477.990 kb on + strand at 477.990 kb on + strand at 477.991 kb on - strand at 477.991 kb on - strand at 477.996 kb on + strand at 478.067 kb on - strand at 478.076 kb on - strand at 478.125 kb on + strand at 478.236 kb on + strand, within ABID97_RS02375 at 478.310 kb on + strand, within ABID97_RS02375 at 478.310 kb on + strand, within ABID97_RS02375 at 478.310 kb on + strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.311 kb on - strand, within ABID97_RS02375 at 478.318 kb on - strand, within ABID97_RS02375 at 478.318 kb on - strand, within ABID97_RS02375 at 478.318 kb on - strand, within ABID97_RS02375 at 478.318 kb on - strand, within ABID97_RS02375 at 478.352 kb on + strand, within ABID97_RS02375 at 478.492 kb on - strand, within ABID97_RS02375 at 478.492 kb on - strand, within ABID97_RS02375 at 478.523 kb on - strand, within ABID97_RS02375 at 478.565 kb on + strand, within ABID97_RS02375 at 478.566 kb on - strand, within ABID97_RS02375 at 478.566 kb on - strand, within ABID97_RS02375 at 478.596 kb on + strand, within ABID97_RS02375 at 478.597 kb on - strand, within ABID97_RS02375 at 478.597 kb on - strand, within ABID97_RS02375 at 478.626 kb on + strand, within ABID97_RS02375 at 478.643 kb on + strand, within ABID97_RS02375 at 478.644 kb on - strand, within ABID97_RS02375 at 478.644 kb on - strand, within ABID97_RS02375 at 478.644 kb on - strand, within ABID97_RS02375 at 478.644 kb on - strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.645 kb on + strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.646 kb on - strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.647 kb on + strand, within ABID97_RS02375 at 478.648 kb on - strand, within ABID97_RS02375 at 478.648 kb on - strand, within ABID97_RS02375 at 478.648 kb on - strand, within ABID97_RS02375 at 478.648 kb on - strand, within ABID97_RS02375 at 478.654 kb on + strand, within ABID97_RS02375 at 478.655 kb on - strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.679 kb on + strand, within ABID97_RS02375 at 478.680 kb on - strand, within ABID97_RS02375 at 478.680 kb on - strand, within ABID97_RS02375 at 478.680 kb on - strand, within ABID97_RS02375 at 478.680 kb on - strand, within ABID97_RS02375 at 478.680 kb on - strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.707 kb on + strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.708 kb on - strand, within ABID97_RS02375 at 478.766 kb on - strand, within ABID97_RS02375 at 478.766 kb on - strand, within ABID97_RS02375 at 478.766 kb on - strand, within ABID97_RS02375 at 478.782 kb on + strand, within ABID97_RS02375 at 478.783 kb on - strand, within ABID97_RS02375 at 478.805 kb on + strand, within ABID97_RS02375 at 478.806 kb on - strand, within ABID97_RS02375 at 478.806 kb on - strand, within ABID97_RS02375 at 478.806 kb on - strand, within ABID97_RS02375 at 478.806 kb on - strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.827 kb on + strand, within ABID97_RS02375 at 478.828 kb on - strand, within ABID97_RS02375 at 478.828 kb on - strand, within ABID97_RS02375 at 478.828 kb on - strand, within ABID97_RS02375 at 478.828 kb on - strand, within ABID97_RS02375 at 478.828 kb on - strand, within ABID97_RS02375 at 478.832 kb on - strand, within ABID97_RS02375 at 478.832 kb on - strand, within ABID97_RS02375 at 478.863 kb on + strand, within ABID97_RS02375 at 478.863 kb on + strand, within ABID97_RS02375 at 478.863 kb on + strand, within ABID97_RS02375 at 478.864 kb on - strand, within ABID97_RS02375 at 478.894 kb on - strand, within ABID97_RS02375 at 478.894 kb on - strand, within ABID97_RS02375 at 478.946 kb on - strand, within ABID97_RS02375 at 478.959 kb on + strand, within ABID97_RS02375 at 478.960 kb on - strand, within ABID97_RS02375 at 479.059 kb on + strand, within ABID97_RS02375 at 479.060 kb on - strand, within ABID97_RS02375 at 479.060 kb on - strand, within ABID97_RS02375 at 479.146 kb on + strand, within ABID97_RS02375 at 479.190 kb on - strand, within ABID97_RS02375 at 479.355 kb on + strand at 479.355 kb on + strand at 479.411 kb on + strand at 479.412 kb on - strand at 479.412 kb on - strand at 479.412 kb on - strand at 479.434 kb on - strand at 479.487 kb on - strand at 479.579 kb on - strand, within ABID97_RS02380 at 479.617 kb on - strand, within ABID97_RS02380 at 479.620 kb on - strand, within ABID97_RS02380 at 479.620 kb on - strand, within ABID97_RS02380 at 479.628 kb on - strand, within ABID97_RS02380 at 479.678 kb on + strand at 479.687 kb on + strand at 479.687 kb on + strand at 479.687 kb on + strand at 479.687 kb on + strand at 479.715 kb on + strand at 479.715 kb on + strand at 479.716 kb on - strand at 479.751 kb on - strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.859 kb on + strand at 479.860 kb on - strand at 479.860 kb on - strand at 479.860 kb on - strand at 479.916 kb on + strand, within ABID97_RS02385 at 479.916 kb on + strand, within ABID97_RS02385 at 479.916 kb on + strand, within ABID97_RS02385 at 479.917 kb on - strand, within ABID97_RS02385 at 479.917 kb on - strand, within ABID97_RS02385 at 479.917 kb on - strand, within ABID97_RS02385 at 480.328 kb on + strand at 480.328 kb on + strand at 480.328 kb on + strand at 480.328 kb on + strand at 480.329 kb on - strand at 480.329 kb on - strand at 480.329 kb on - strand at 480.433 kb on + strand at 480.433 kb on + strand at 480.434 kb on - strand at 480.434 kb on - strand at 480.434 kb on - strand at 480.434 kb on - strand at 480.470 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 477,215 + ABID97_RS02370 0.49 +1.1 477,216 - ABID97_RS02370 0.49 -0.2 477,216 - ABID97_RS02370 0.49 -0.9 477,216 - ABID97_RS02370 0.49 -0.2 477,216 - ABID97_RS02370 0.49 +2.1 477,216 - ABID97_RS02370 0.49 +0.0 477,272 + ABID97_RS02370 0.55 +1.6 477,272 + ABID97_RS02370 0.55 -0.9 477,272 + ABID97_RS02370 0.55 +1.1 477,272 + ABID97_RS02370 0.55 +0.1 477,272 + ABID97_RS02370 0.55 +2.7 477,273 - ABID97_RS02370 0.55 +0.5 477,273 - ABID97_RS02370 0.55 -0.9 477,273 - ABID97_RS02370 0.55 -0.4 477,273 - ABID97_RS02370 0.55 +0.1 477,542 + ABID97_RS02370 0.84 -0.1 477,543 - ABID97_RS02370 0.84 -0.0 477,575 + ABID97_RS02370 0.88 +0.5 477,576 - ABID97_RS02370 0.88 -0.4 477,657 + +1.1 477,658 - -0.1 477,658 - +2.1 477,658 - -1.6 477,658 - +0.8 477,658 - -0.7 477,658 - -0.0 477,658 - -0.9 477,666 + -0.6 477,666 + -0.1 477,666 + +0.0 477,667 - -0.2 477,686 + -0.5 477,686 + -0.2 477,686 + -0.0 477,687 - +0.2 477,687 - +0.3 477,687 - +0.9 477,719 + -0.3 477,720 - -0.1 477,720 - +0.4 477,720 - -0.4 477,720 - -0.5 477,739 + +1.5 477,739 + +0.6 477,768 + -0.1 477,768 + -0.4 477,885 + +0.3 477,885 + -0.5 477,885 + +0.6 477,886 - +0.4 477,886 - +0.4 477,886 - -0.1 477,886 - -0.2 477,908 - -0.5 477,990 + +0.1 477,990 + -0.5 477,990 + +1.1 477,991 - +0.1 477,991 - +0.1 477,996 + -0.7 478,067 - -2.6 478,076 - -1.5 478,125 + -0.3 478,236 + ABID97_RS02375 0.16 +0.5 478,310 + ABID97_RS02375 0.21 -0.9 478,310 + ABID97_RS02375 0.21 +0.1 478,310 + ABID97_RS02375 0.21 +0.6 478,311 - ABID97_RS02375 0.21 +0.5 478,311 - ABID97_RS02375 0.21 -0.2 478,311 - ABID97_RS02375 0.21 +0.6 478,311 - ABID97_RS02375 0.21 -0.7 478,311 - ABID97_RS02375 0.21 -0.3 478,311 - ABID97_RS02375 0.21 +0.1 478,311 - ABID97_RS02375 0.21 +0.0 478,311 - ABID97_RS02375 0.21 +1.1 478,311 - ABID97_RS02375 0.21 -0.2 478,318 - ABID97_RS02375 0.22 +0.5 478,318 - ABID97_RS02375 0.22 -0.4 478,318 - ABID97_RS02375 0.22 +0.2 478,318 - ABID97_RS02375 0.22 +0.1 478,352 + ABID97_RS02375 0.24 -0.8 478,492 - ABID97_RS02375 0.34 -0.3 478,492 - ABID97_RS02375 0.34 -0.2 478,523 - ABID97_RS02375 0.36 -0.7 478,565 + ABID97_RS02375 0.38 -1.0 478,566 - ABID97_RS02375 0.38 -0.3 478,566 - ABID97_RS02375 0.38 +0.6 478,596 + ABID97_RS02375 0.40 +0.2 478,597 - ABID97_RS02375 0.41 -0.2 478,597 - ABID97_RS02375 0.41 -0.6 478,626 + ABID97_RS02375 0.42 +0.5 478,643 + ABID97_RS02375 0.44 -0.0 478,644 - ABID97_RS02375 0.44 -0.2 478,644 - ABID97_RS02375 0.44 -1.0 478,644 - ABID97_RS02375 0.44 -0.1 478,644 - ABID97_RS02375 0.44 -0.2 478,645 + ABID97_RS02375 0.44 -1.6 478,645 + ABID97_RS02375 0.44 +0.2 478,645 + ABID97_RS02375 0.44 +0.4 478,645 + ABID97_RS02375 0.44 -1.0 478,645 + ABID97_RS02375 0.44 +0.8 478,645 + ABID97_RS02375 0.44 +0.4 478,645 + ABID97_RS02375 0.44 -0.4 478,646 - ABID97_RS02375 0.44 -0.3 478,646 - ABID97_RS02375 0.44 -0.1 478,646 - ABID97_RS02375 0.44 +0.5 478,646 - ABID97_RS02375 0.44 -0.0 478,646 - ABID97_RS02375 0.44 -0.0 478,646 - ABID97_RS02375 0.44 -0.0 478,646 - ABID97_RS02375 0.44 +0.5 478,646 - ABID97_RS02375 0.44 -0.1 478,647 + ABID97_RS02375 0.44 -0.4 478,647 + ABID97_RS02375 0.44 -0.2 478,647 + ABID97_RS02375 0.44 +0.1 478,647 + ABID97_RS02375 0.44 -0.6 478,647 + ABID97_RS02375 0.44 +0.8 478,647 + ABID97_RS02375 0.44 -0.1 478,647 + ABID97_RS02375 0.44 -0.4 478,648 - ABID97_RS02375 0.44 +0.1 478,648 - ABID97_RS02375 0.44 +0.0 478,648 - ABID97_RS02375 0.44 +0.1 478,648 - ABID97_RS02375 0.44 +1.4 478,654 + ABID97_RS02375 0.44 -0.3 478,655 - ABID97_RS02375 0.44 +1.0 478,679 + ABID97_RS02375 0.46 -0.0 478,679 + ABID97_RS02375 0.46 +0.2 478,679 + ABID97_RS02375 0.46 +0.1 478,679 + ABID97_RS02375 0.46 -0.4 478,679 + ABID97_RS02375 0.46 -0.8 478,679 + ABID97_RS02375 0.46 +0.4 478,679 + ABID97_RS02375 0.46 -0.5 478,679 + ABID97_RS02375 0.46 +0.1 478,680 - ABID97_RS02375 0.46 +0.1 478,680 - ABID97_RS02375 0.46 -0.7 478,680 - ABID97_RS02375 0.46 +0.8 478,680 - ABID97_RS02375 0.46 -1.2 478,680 - ABID97_RS02375 0.46 -0.8 478,707 + ABID97_RS02375 0.48 -0.3 478,707 + ABID97_RS02375 0.48 -0.3 478,707 + ABID97_RS02375 0.48 +0.2 478,707 + ABID97_RS02375 0.48 -0.2 478,707 + ABID97_RS02375 0.48 -2.3 478,707 + ABID97_RS02375 0.48 +0.8 478,707 + ABID97_RS02375 0.48 -0.2 478,707 + ABID97_RS02375 0.48 -0.2 478,708 - ABID97_RS02375 0.48 +0.6 478,708 - ABID97_RS02375 0.48 -1.4 478,708 - ABID97_RS02375 0.48 -0.1 478,708 - ABID97_RS02375 0.48 +0.4 478,708 - ABID97_RS02375 0.48 -1.2 478,708 - ABID97_RS02375 0.48 -0.3 478,708 - ABID97_RS02375 0.48 +0.1 478,708 - ABID97_RS02375 0.48 +0.5 478,708 - ABID97_RS02375 0.48 +1.1 478,766 - ABID97_RS02375 0.52 -0.0 478,766 - ABID97_RS02375 0.52 +0.5 478,766 - ABID97_RS02375 0.52 -0.5 478,782 + ABID97_RS02375 0.53 -0.1 478,783 - ABID97_RS02375 0.53 +0.6 478,805 + ABID97_RS02375 0.54 +0.1 478,806 - ABID97_RS02375 0.54 -1.5 478,806 - ABID97_RS02375 0.54 -0.2 478,806 - ABID97_RS02375 0.54 +0.1 478,806 - ABID97_RS02375 0.54 -1.2 478,827 + ABID97_RS02375 0.56 -0.2 478,827 + ABID97_RS02375 0.56 -0.4 478,827 + ABID97_RS02375 0.56 -0.8 478,827 + ABID97_RS02375 0.56 -0.6 478,827 + ABID97_RS02375 0.56 -0.0 478,827 + ABID97_RS02375 0.56 -0.3 478,827 + ABID97_RS02375 0.56 +0.1 478,828 - ABID97_RS02375 0.56 +0.5 478,828 - ABID97_RS02375 0.56 +0.2 478,828 - ABID97_RS02375 0.56 -0.1 478,828 - ABID97_RS02375 0.56 -0.1 478,828 - ABID97_RS02375 0.56 -0.2 478,832 - ABID97_RS02375 0.56 +0.2 478,832 - ABID97_RS02375 0.56 +0.3 478,863 + ABID97_RS02375 0.58 -0.8 478,863 + ABID97_RS02375 0.58 -0.2 478,863 + ABID97_RS02375 0.58 +0.2 478,864 - ABID97_RS02375 0.58 +0.2 478,894 - ABID97_RS02375 0.60 -0.3 478,894 - ABID97_RS02375 0.60 +0.3 478,946 - ABID97_RS02375 0.64 +0.2 478,959 + ABID97_RS02375 0.65 -0.2 478,960 - ABID97_RS02375 0.65 -0.4 479,059 + ABID97_RS02375 0.71 -1.6 479,060 - ABID97_RS02375 0.71 -1.7 479,060 - ABID97_RS02375 0.71 +0.3 479,146 + ABID97_RS02375 0.77 -0.9 479,190 - ABID97_RS02375 0.80 +0.1 479,355 + -0.4 479,355 + +0.7 479,411 + +1.8 479,412 - +0.1 479,412 - -0.6 479,412 - +0.9 479,434 - -0.5 479,487 - +0.2 479,579 - ABID97_RS02380 0.61 -0.1 479,617 - ABID97_RS02380 0.82 +0.3 479,620 - ABID97_RS02380 0.83 -0.8 479,620 - ABID97_RS02380 0.83 +0.9 479,628 - ABID97_RS02380 0.88 +3.4 479,678 + -0.5 479,687 + +0.2 479,687 + +0.0 479,687 + -0.0 479,687 + -0.3 479,715 + -0.0 479,715 + +0.2 479,716 - -0.7 479,751 - +0.0 479,859 + -0.1 479,859 + -0.1 479,859 + +0.8 479,859 + -1.3 479,859 + -0.3 479,859 + -0.5 479,859 + +0.2 479,860 - -0.3 479,860 - -0.2 479,860 - -0.0 479,916 + ABID97_RS02385 0.19 +1.0 479,916 + ABID97_RS02385 0.19 +0.5 479,916 + ABID97_RS02385 0.19 +0.6 479,917 - ABID97_RS02385 0.20 -1.1 479,917 - ABID97_RS02385 0.20 +0.4 479,917 - ABID97_RS02385 0.20 +0.7 480,328 + -0.1 480,328 + -0.5 480,328 + +0.3 480,328 + +0.6 480,329 - -1.0 480,329 - +0.2 480,329 - +0.1 480,433 + -0.5 480,433 + +0.2 480,434 - -0.5 480,434 - +0.1 480,434 - -0.6 480,434 - +0.4 480,470 - +0.1
Or see this region's nucleotide sequence