Strain Fitness in Pseudomonas sp. RS175 around PFR28_04939

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
5,632,090	-				+1.2
5,632,090	-				-0.8
5,632,090	-				-0.5
5,632,154	+				-1.6
5,632,154	+				+0.0
5,632,154	+				-1.4
5,632,154	+				+1.3
5,632,155	-				+1.2
5,632,155	-				-1.3
5,632,155	-				+0.0
5,632,208	+				+0.9
5,632,208	+				+0.2
5,632,208	+				-0.7
5,632,208	+				+0.8
5,632,208	+				+0.5
5,632,208	+				-1.2
5,632,209	-				+0.2
5,632,209	-				+1.9
5,632,209	-				+1.0
5,632,209	-				-1.3
5,632,210	+				+0.2
5,632,210	+				+1.2
5,632,210	+				+1.1
5,632,211	-				-1.6
5,632,211	-				-1.7
5,632,283	+				-2.3
5,632,284	-				-0.8
5,632,333	+		PFR28_04939	0.21	-3.2
5,632,333	+		PFR28_04939	0.21	-1.1
5,632,333	+		PFR28_04939	0.21	-1.6
5,632,333	+		PFR28_04939	0.21	-0.7
5,632,334	-		PFR28_04939	0.21	-0.3
5,632,334	-		PFR28_04939	0.21	+0.6
5,632,334	-		PFR28_04939	0.21	-0.8
5,632,414	+		PFR28_04939	0.40	-0.7
5,632,492	+		PFR28_04939	0.59	+0.1
5,632,680	+				+0.5
5,632,680	+				+0.3
5,632,681	-				-0.5
5,632,693	-		PFR28_04940	0.12	-0.7
5,632,693	-		PFR28_04940	0.12	+1.2
5,632,701	+		PFR28_04940	0.15	+0.6
5,632,701	+		PFR28_04940	0.15	-0.3
5,632,702	-		PFR28_04940	0.16	-0.9
5,632,702	-		PFR28_04940	0.16	-0.3
5,632,811	+		PFR28_04940	0.58	-0.7
5,632,811	+		PFR28_04940	0.58	-0.3
5,632,811	+		PFR28_04940	0.58	+0.6
5,632,811	+		PFR28_04940	0.58	-0.3
5,632,811	+		PFR28_04940	0.58	+0.1
5,632,811	+		PFR28_04940	0.58	-2.6
5,632,811	+		PFR28_04940	0.58	-0.4
5,632,811	+		PFR28_04940	0.58	+0.4
5,632,812	-		PFR28_04940	0.59	+0.2
5,632,812	-		PFR28_04940	0.59	-1.4
5,632,812	-		PFR28_04940	0.59	+1.0
5,632,812	-		PFR28_04940	0.59	-1.1
5,632,812	-		PFR28_04940	0.59	-1.0
5,632,812	-		PFR28_04940	0.59	+0.9
5,632,812	-		PFR28_04940	0.59	-1.3
5,632,812	-		PFR28_04940	0.59	+0.3
5,632,869	+		PFR28_04940	0.81	+1.3
5,632,869	+		PFR28_04940	0.81	+0.0
5,632,870	-		PFR28_04940	0.82	-0.1
5,632,926	+				+0.9
5,632,926	+				+0.7
5,632,926	+				-0.9
5,632,926	+				-0.4
5,632,926	+				+1.5
5,632,926	+				-0.5
5,632,926	+				-0.2
5,632,926	+				-0.2
5,632,927	-				-0.1
5,632,927	-				+0.1
5,632,927	-				+1.1
5,632,927	-				+0.8
5,632,927	-				+0.2
5,632,927	-				+0.7
5,632,927	-				+0.2
5,632,927	-				-3.2
5,632,927	-				+1.3
5,632,927	-				-3.3
5,632,927	-				+0.3
5,632,927	-				-0.0
5,632,927	-				-0.5
5,632,927	-				-0.8
5,632,927	-				-1.3
5,632,927	-				-0.3
5,632,927	-				-3.2
5,633,024	+		PFR28_04941	0.14	-1.6
5,633,024	+		PFR28_04941	0.14	-1.6
5,633,024	+		PFR28_04941	0.14	-0.8
5,633,024	+		PFR28_04941	0.14	+0.5
5,633,024	+		PFR28_04941	0.14	+1.7
5,633,024	+		PFR28_04941	0.14	+0.9
5,633,024	+		PFR28_04941	0.14	-2.2
5,633,024	+		PFR28_04941	0.14	-2.0
5,633,024	+		PFR28_04941	0.14	-1.3
5,633,024	+		PFR28_04941	0.14	+1.2
5,633,025	-		PFR28_04941	0.14	-2.3
5,633,025	-		PFR28_04941	0.14	-0.6
5,633,025	-		PFR28_04941	0.14	-2.2
5,633,025	-		PFR28_04941	0.14	+0.5
5,633,025	-		PFR28_04941	0.14	+0.6
5,633,028	+		PFR28_04941	0.15	-1.4
5,633,028	+		PFR28_04941	0.15	+1.2
5,633,029	-		PFR28_04941	0.15	+0.6
5,633,029	-		PFR28_04941	0.15	+0.7
5,633,029	-		PFR28_04941	0.15	-1.8
5,633,029	-		PFR28_04941	0.15	-1.7
5,633,095	-		PFR28_04941	0.29	-1.7
5,633,263	+		PFR28_04941	0.64	+0.0
5,633,384	+		PFR28_04941	0.89	+1.2
5,633,385	-		PFR28_04941	0.89	+1.7