Strain Fitness in Pseudomonas sp. RS175 around PFR28_01533

Experiment: L-Phenylalanine carbon 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Phenylalanine carbon 5 mM
1,683,699	-		PFR28_01531	0.70	-0.2
1,683,699	-		PFR28_01531	0.70	-1.7
1,683,699	-		PFR28_01531	0.70	-0.1
1,683,699	-		PFR28_01531	0.70	-0.2
1,683,759	-		PFR28_01531	0.75	+1.2
1,683,902	+		PFR28_01531	0.89	+0.1
1,683,903	-		PFR28_01531	0.89	-0.2
1,683,903	-		PFR28_01531	0.89	+0.4
1,683,903	-		PFR28_01531	0.89	+0.5
1,683,926	+				-0.4
1,683,927	-				+0.8
1,684,032	-				+0.8
1,684,059	+				-0.5
1,684,143	+		PFR28_01532	0.19	-0.9
1,684,144	-		PFR28_01532	0.19	+0.8
1,684,144	-		PFR28_01532	0.19	+0.3
1,684,260	+		PFR28_01532	0.43	-0.9
1,684,272	-		PFR28_01532	0.45	-0.2
1,684,272	-		PFR28_01532	0.45	+0.1
1,684,404	+		PFR28_01532	0.72	-2.5
1,684,404	+		PFR28_01532	0.72	-0.9
1,684,404	+		PFR28_01532	0.72	-0.2
1,684,404	+		PFR28_01532	0.72	+0.4
1,684,405	-		PFR28_01532	0.72	-0.6
1,684,405	-		PFR28_01532	0.72	-1.4
1,684,405	-		PFR28_01532	0.72	-1.0
1,684,405	-		PFR28_01532	0.72	+0.1
1,684,405	-		PFR28_01532	0.72	+0.1
1,684,554	+				-0.7
1,684,612	+				-1.2
1,684,612	+				-1.3
1,685,177	+		PFR28_01533	0.46	-1.9
1,685,322	-		PFR28_01533	0.60	-1.7
1,685,375	+		PFR28_01533	0.65	-0.0
1,685,375	+		PFR28_01533	0.65	-0.8
1,685,375	+		PFR28_01533	0.65	-3.0
1,685,375	+		PFR28_01533	0.65	+0.9
1,685,375	+		PFR28_01533	0.65	-1.1
1,685,375	+		PFR28_01533	0.65	-1.2
1,685,376	-		PFR28_01533	0.65	-0.4
1,685,376	-		PFR28_01533	0.65	-1.0
1,685,376	-		PFR28_01533	0.65	+0.4
1,685,408	+		PFR28_01533	0.68	-1.1
1,685,409	-		PFR28_01533	0.68	+0.1
1,685,551	+		PFR28_01533	0.82	-0.5
1,685,552	-		PFR28_01533	0.82	-1.3
1,685,810	-				-0.1
1,685,882	-				-0.6
1,686,004	+		PFR28_01534	0.13	-0.6
1,686,004	+		PFR28_01534	0.13	+0.7
1,686,004	+		PFR28_01534	0.13	-2.1
1,686,004	+		PFR28_01534	0.13	+1.0
1,686,061	+		PFR28_01534	0.16	-0.3
1,686,061	+		PFR28_01534	0.16	-3.3
1,686,061	+		PFR28_01534	0.16	-0.2
1,686,061	+		PFR28_01534	0.16	+0.6
1,686,062	-		PFR28_01534	0.16	+0.6
1,686,062	-		PFR28_01534	0.16	-0.9
1,686,082	+		PFR28_01534	0.17	-0.9
1,686,082	+		PFR28_01534	0.17	-0.3
1,686,082	+		PFR28_01534	0.17	-0.0
1,686,083	-		PFR28_01534	0.17	+1.4
1,686,083	-		PFR28_01534	0.17	-0.6
1,686,083	-		PFR28_01534	0.17	+0.9
1,686,083	-		PFR28_01534	0.17	-1.5
1,686,112	+		PFR28_01534	0.19	+0.5
1,686,112	+		PFR28_01534	0.19	+1.2
1,686,112	+		PFR28_01534	0.19	+0.5
1,686,112	+		PFR28_01534	0.19	-0.2
1,686,113	-		PFR28_01534	0.19	-0.2
1,686,246	-		PFR28_01534	0.26	-1.6
1,686,247	+		PFR28_01534	0.26	+0.4
1,686,247	+		PFR28_01534	0.26	-0.2
1,686,247	+		PFR28_01534	0.26	-1.0
1,686,248	-		PFR28_01534	0.26	+0.1
1,686,248	-		PFR28_01534	0.26	-1.7
1,686,248	-		PFR28_01534	0.26	-0.6
1,686,248	-		PFR28_01534	0.26	-0.9
1,686,346	+		PFR28_01534	0.32	+0.2
1,686,358	+		PFR28_01534	0.32	+1.2
1,686,358	+		PFR28_01534	0.32	+1.4
1,686,359	-		PFR28_01534	0.32	+0.5
1,686,359	-		PFR28_01534	0.32	-3.3
1,686,511	+		PFR28_01534	0.41	-0.6
1,686,511	+		PFR28_01534	0.41	-1.8
1,686,517	+		PFR28_01534	0.41	+0.3
1,686,517	+		PFR28_01534	0.41	-0.0
1,686,517	+		PFR28_01534	0.41	+1.9
1,686,517	+		PFR28_01534	0.41	-1.2
1,686,517	+		PFR28_01534	0.41	-3.1
1,686,518	-		PFR28_01534	0.41	+0.8
1,686,518	-		PFR28_01534	0.41	+0.7
1,686,518	-		PFR28_01534	0.41	-0.2
1,686,518	-		PFR28_01534	0.41	-1.3
1,686,518	-		PFR28_01534	0.41	+0.6
1,686,518	-		PFR28_01534	0.41	+1.8
1,686,518	-		PFR28_01534	0.41	-1.0
1,686,518	-		PFR28_01534	0.41	-1.9
1,686,595	+		PFR28_01534	0.45	-0.2
1,686,715	+		PFR28_01534	0.52	+1.6