Strain Fitness in Pseudomonas sp. RS175 around PFR28_00083

Experiment: L-Phenylalanine carbon 5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPFR28_00082 and PFR28_00083 are separated by 8 nucleotidesPFR28_00083 and PFR28_00084 are separated by 16 nucleotides PFR28_00082: PFR28_00082 - ATP-dependent zinc metalloprotease FtsH, at 93,375 to 95,294 _00082 PFR28_00083: PFR28_00083 - Dihydropteroate synthase, at 95,303 to 96,154 _00083 PFR28_00084: PFR28_00084 - Phosphoglucosamine mutase, at 96,171 to 97,508 _00084 Position (kb) 95 96 97Strain fitness (log2 ratio) -2 -1 0 1at 95.228 kb on + strandat 95.228 kb on + strandat 95.292 kb on + strandat 95.313 kb on + strandat 95.313 kb on + strandat 96.152 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine carbon 5 mM
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95,228 + -1.6
95,228 + -0.4
95,292 + -0.0
95,313 + -2.0
95,313 + -1.4
96,152 + -0.4

Or see this region's nucleotide sequence