Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09570

Experiment: R2A with Spectinomycin 0.05 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Spectinomycin 0.05 mg/ml
2,367,057	+		CA265_RS09565	0.22	+0.6
2,367,063	-		CA265_RS09565	0.22	-0.2
2,367,063	-		CA265_RS09565	0.22	-1.5
2,367,195	-		CA265_RS09565	0.34	+0.3
2,367,216	+		CA265_RS09565	0.35	+0.6
2,367,217	-		CA265_RS09565	0.35	+0.1
2,367,220	+		CA265_RS09565	0.36	-1.2
2,367,221	-		CA265_RS09565	0.36	-0.9
2,367,225	-		CA265_RS09565	0.36	-0.3
2,367,225	-		CA265_RS09565	0.36	-0.2
2,367,230	+		CA265_RS09565	0.37	-0.6
2,367,356	+		CA265_RS09565	0.47	+0.4
2,367,372	-		CA265_RS09565	0.49	+1.1
2,367,526	+		CA265_RS09565	0.62	+0.5
2,367,593	+		CA265_RS09565	0.68	-0.6
2,367,615	+		CA265_RS09565	0.70	+0.4
2,367,616	-		CA265_RS09565	0.70	-0.5
2,367,645	+		CA265_RS09565	0.72	-1.3
2,367,646	-		CA265_RS09565	0.72	-0.8
2,367,691	+		CA265_RS09565	0.76	-0.7
2,367,692	-		CA265_RS09565	0.76	-0.2
2,367,710	+		CA265_RS09565	0.78	-0.1
2,367,719	+		CA265_RS09565	0.78	+0.5
2,367,719	+		CA265_RS09565	0.78	-0.2
2,367,719	+		CA265_RS09565	0.78	-1.4
2,367,720	-		CA265_RS09565	0.79	+0.0
2,367,721	+		CA265_RS09565	0.79	-0.5
2,367,782	+		CA265_RS09565	0.84	-1.1
2,367,782	+		CA265_RS09565	0.84	-0.6
2,367,881	-				+0.1
2,367,917	-				+0.3
2,367,971	+				-0.3
2,368,109	-		CA265_RS09570	0.15	-1.3
2,368,193	-		CA265_RS09570	0.30	-0.7
2,368,205	+		CA265_RS09570	0.33	-0.6
2,368,206	-		CA265_RS09570	0.33	-1.0
2,368,246	+		CA265_RS09570	0.40	-1.4
2,368,274	-		CA265_RS09570	0.46	+0.0
2,368,318	+		CA265_RS09570	0.54	-2.7
2,368,319	-		CA265_RS09570	0.54	-1.5
2,368,367	-		CA265_RS09570	0.63	-0.7
2,368,399	-		CA265_RS09570	0.69	+0.2
2,368,451	+		CA265_RS09570	0.79	-0.1
2,368,547	+				-0.5
2,368,560	+				-0.2
2,368,629	-				-0.6
2,368,638	-				+0.5
2,368,638	-				+0.9
2,368,685	+		CA265_RS09575	0.16	-0.8
2,368,698	+		CA265_RS09575	0.18	-0.4
2,368,772	+		CA265_RS09575	0.29	+0.5
2,368,790	+		CA265_RS09575	0.32	-0.4
2,368,790	+		CA265_RS09575	0.32	+0.3
2,368,791	-		CA265_RS09575	0.32	+0.2
2,368,791	-		CA265_RS09575	0.32	-0.3
2,368,791	-		CA265_RS09575	0.32	-0.3
2,368,822	-				+1.3
2,368,949	-		CA265_RS09575	0.56	+0.4
2,368,998	-		CA265_RS09575	0.63	+0.2
2,369,022	-		CA265_RS09575	0.67	+0.1
2,369,041	+		CA265_RS09575	0.70	+0.6
2,369,042	-		CA265_RS09575	0.70	+0.3
2,369,120	+		CA265_RS09575	0.81	-0.2
2,369,257	-				+1.3
2,369,291	+				+0.0
2,369,291	+				-0.0
2,369,322	+				-1.0
2,369,323	-				+0.4
2,369,358	-				+0.3
2,369,368	+				-0.0
2,369,369	-				-0.9
2,369,376	+				+0.9
2,369,377	-				+0.0
2,369,434	-				+0.1
2,369,441	-				-0.5
2,369,458	+				+0.3
2,369,524	+				-0.1
2,369,525	-				-0.0
2,369,530	+				+0.1
2,369,543	-				-0.3