Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17170

Experiment: L-Citrulline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Citrulline (C)
3,427,189	+		ABIE40_RS17165	0.35	-0.2
3,427,189	+		ABIE40_RS17165	0.35	-0.5
3,427,189	+		ABIE40_RS17165	0.35	+0.3
3,427,189	+		ABIE40_RS17165	0.35	-0.3
3,427,189	+		ABIE40_RS17165	0.35	+1.8
3,427,190	-		ABIE40_RS17165	0.35	+0.7
3,427,190	-		ABIE40_RS17165	0.35	+0.4
3,427,190	-		ABIE40_RS17165	0.35	+1.6
3,427,390	+		ABIE40_RS17165	0.55	+1.9
3,427,391	-		ABIE40_RS17165	0.56	-1.4
3,427,391	-		ABIE40_RS17165	0.56	-1.6
3,427,391	-		ABIE40_RS17165	0.56	-2.0
3,427,498	+		ABIE40_RS17165	0.66	-0.2
3,427,499	-		ABIE40_RS17165	0.66	+1.3
3,427,499	-		ABIE40_RS17165	0.66	-0.7
3,427,504	+		ABIE40_RS17165	0.67	-0.1
3,427,505	-		ABIE40_RS17165	0.67	+0.7
3,427,505	-		ABIE40_RS17165	0.67	-1.1
3,427,935	+				+1.0
3,428,019	+				+1.9
3,428,020	-				+0.3
3,428,020	-				+0.1
3,428,020	-				+0.1
3,428,020	-				+0.7
3,428,065	+				+0.7
3,428,066	-				-1.7
3,428,083	+				-1.9
3,428,083	+				-0.9
3,428,084	-				-0.1
3,428,084	-				-1.5
3,428,084	-				+0.6
3,428,101	+				+0.6
3,428,101	+				-1.3
3,428,102	-				-0.7
3,428,227	+		ABIE40_RS17170	0.13	+0.3
3,428,227	+		ABIE40_RS17170	0.13	-2.3
3,428,228	-		ABIE40_RS17170	0.13	-2.4
3,428,228	-		ABIE40_RS17170	0.13	-0.9
3,428,228	-		ABIE40_RS17170	0.13	-4.0
3,428,344	+		ABIE40_RS17170	0.18	-1.8
3,428,344	+		ABIE40_RS17170	0.18	-0.1
3,428,345	-		ABIE40_RS17170	0.18	+0.2
3,428,345	-		ABIE40_RS17170	0.18	-2.0
3,428,353	+		ABIE40_RS17170	0.19	-0.1
3,428,353	+		ABIE40_RS17170	0.19	-0.2
3,428,353	+		ABIE40_RS17170	0.19	-1.5
3,428,353	+		ABIE40_RS17170	0.19	+0.6
3,428,353	+		ABIE40_RS17170	0.19	-0.0
3,428,353	+		ABIE40_RS17170	0.19	-1.4
3,428,353	+		ABIE40_RS17170	0.19	+1.7
3,428,353	+		ABIE40_RS17170	0.19	-1.1
3,428,353	+		ABIE40_RS17170	0.19	-0.0
3,428,353	+		ABIE40_RS17170	0.19	+1.9
3,428,353	+		ABIE40_RS17170	0.19	+1.7
3,428,354	-		ABIE40_RS17170	0.19	-1.2
3,428,354	-		ABIE40_RS17170	0.19	+1.1
3,428,354	-		ABIE40_RS17170	0.19	-0.1
3,428,354	-		ABIE40_RS17170	0.19	-3.3
3,428,354	-		ABIE40_RS17170	0.19	+0.7
3,428,354	-		ABIE40_RS17170	0.19	-0.2
3,428,354	-		ABIE40_RS17170	0.19	-2.1
3,428,354	-		ABIE40_RS17170	0.19	-2.3
3,428,366	-		ABIE40_RS17170	0.19	+0.3
3,428,412	+		ABIE40_RS17170	0.21	-0.9
3,428,413	-		ABIE40_RS17170	0.21	+0.5
3,428,413	-		ABIE40_RS17170	0.21	+1.9
3,428,413	-		ABIE40_RS17170	0.21	-0.1
3,428,413	-		ABIE40_RS17170	0.21	-2.4
3,428,475	-		ABIE40_RS17170	0.24	+2.5
3,428,644	+		ABIE40_RS17170	0.32	+1.1
3,428,644	+		ABIE40_RS17170	0.32	-1.4
3,428,644	+		ABIE40_RS17170	0.32	+2.0
3,428,645	-		ABIE40_RS17170	0.32	+0.9
3,428,645	-		ABIE40_RS17170	0.32	-0.9
3,428,792	-		ABIE40_RS17170	0.38	+0.3
3,428,797	+		ABIE40_RS17170	0.38	+1.2
3,428,797	+		ABIE40_RS17170	0.38	+2.0
3,428,797	+		ABIE40_RS17170	0.38	-0.6
3,428,798	-		ABIE40_RS17170	0.38	+0.2
3,428,798	-		ABIE40_RS17170	0.38	-2.0
3,428,871	+		ABIE40_RS17170	0.42	-0.4
3,428,871	+		ABIE40_RS17170	0.42	+0.7
3,428,871	+		ABIE40_RS17170	0.42	+2.5
3,428,872	-		ABIE40_RS17170	0.42	+1.0
3,428,872	-		ABIE40_RS17170	0.42	-0.9
3,428,891	-		ABIE40_RS17170	0.43	-2.6
3,428,971	-		ABIE40_RS17170	0.46	+1.1
3,429,135	+		ABIE40_RS17170	0.53	+1.7
3,429,164	-		ABIE40_RS17170	0.55	+2.9
3,429,196	+		ABIE40_RS17170	0.56	+0.2
3,429,196	+		ABIE40_RS17170	0.56	-2.2
3,429,196	+		ABIE40_RS17170	0.56	+1.5
3,429,197	-		ABIE40_RS17170	0.56	+0.3
3,429,197	-		ABIE40_RS17170	0.56	+0.7
3,429,197	-		ABIE40_RS17170	0.56	-0.2
3,429,322	+		ABIE40_RS17170	0.62	-0.3
3,429,322	+		ABIE40_RS17170	0.62	-0.4
3,429,323	-		ABIE40_RS17170	0.62	+0.3
3,429,323	-		ABIE40_RS17170	0.62	+1.1
3,429,324	+		ABIE40_RS17170	0.62	+0.5
3,429,401	+		ABIE40_RS17170	0.65	-1.1
3,429,401	+		ABIE40_RS17170	0.65	+0.6
3,429,401	+		ABIE40_RS17170	0.65	-0.2
3,429,401	+		ABIE40_RS17170	0.65	+0.9
3,429,401	+		ABIE40_RS17170	0.65	+1.1
3,429,401	+		ABIE40_RS17170	0.65	+0.1
3,429,401	+		ABIE40_RS17170	0.65	+0.6
3,429,402	-		ABIE40_RS17170	0.65	-1.1
3,429,402	-		ABIE40_RS17170	0.65	+0.8
3,429,402	-		ABIE40_RS17170	0.65	+0.2
3,429,402	-		ABIE40_RS17170	0.65	-0.5
3,429,429	+		ABIE40_RS17170	0.67	-0.7
3,429,430	-		ABIE40_RS17170	0.67	-2.2
3,429,430	-		ABIE40_RS17170	0.67	+1.2
3,429,463	+		ABIE40_RS17170	0.68	-0.4
3,429,464	-		ABIE40_RS17170	0.68	-1.7
3,429,464	-		ABIE40_RS17170	0.68	+0.3
3,429,464	-		ABIE40_RS17170	0.68	+0.0
3,429,550	+		ABIE40_RS17170	0.72	-0.7
3,429,550	+		ABIE40_RS17170	0.72	+0.2
3,429,550	+		ABIE40_RS17170	0.72	-1.8
3,429,550	+		ABIE40_RS17170	0.72	-0.2
3,429,550	+		ABIE40_RS17170	0.72	-0.9
3,429,550	+		ABIE40_RS17170	0.72	-0.9
3,429,551	-		ABIE40_RS17170	0.72	+0.4
3,429,551	-		ABIE40_RS17170	0.72	-0.7
3,429,551	-		ABIE40_RS17170	0.72	+0.6
3,429,551	-		ABIE40_RS17170	0.72	-0.4
3,429,551	-		ABIE40_RS17170	0.72	+0.9
3,429,551	-		ABIE40_RS17170	0.72	+0.9
3,429,556	+		ABIE40_RS17170	0.72	-0.9
3,429,557	-		ABIE40_RS17170	0.72	+1.4
3,429,557	-		ABIE40_RS17170	0.72	+0.5
3,429,557	-		ABIE40_RS17170	0.72	-2.9
3,429,688	+		ABIE40_RS17170	0.78	+0.5
3,429,688	+		ABIE40_RS17170	0.78	+0.6
3,429,730	+		ABIE40_RS17170	0.80	-1.6
3,429,730	+		ABIE40_RS17170	0.80	-2.2
3,429,731	-		ABIE40_RS17170	0.80	-0.6
3,429,731	-		ABIE40_RS17170	0.80	+1.2
3,429,731	-		ABIE40_RS17170	0.80	+0.0
3,429,731	-		ABIE40_RS17170	0.80	-0.1
3,429,829	-		ABIE40_RS17170	0.84	-0.8
3,429,837	+		ABIE40_RS17170	0.85	-2.0
3,430,011	+				+1.3
3,430,011	+				-1.4
3,430,107	+				-1.4
3,430,107	+				-1.9
3,430,108	-				+0.9
3,430,214	+				-3.1
3,430,334	-		ABIE40_RS17175	0.13	-1.1
3,430,464	+		ABIE40_RS17175	0.25	-0.4
3,430,465	-		ABIE40_RS17175	0.25	+1.1
3,430,465	-		ABIE40_RS17175	0.25	-0.9
3,430,465	-		ABIE40_RS17175	0.25	-0.0
3,430,465	-		ABIE40_RS17175	0.25	+1.7
3,430,480	+		ABIE40_RS17175	0.27	-0.3
3,430,481	-		ABIE40_RS17175	0.27	-0.3
3,430,481	-		ABIE40_RS17175	0.27	-0.9
3,430,481	-		ABIE40_RS17175	0.27	+1.4
3,430,633	+		ABIE40_RS17175	0.40	+2.2
3,430,634	-		ABIE40_RS17175	0.40	-1.8
3,430,634	-		ABIE40_RS17175	0.40	+1.2
3,430,634	-		ABIE40_RS17175	0.40	+0.4
3,430,635	+		ABIE40_RS17175	0.40	+0.8
3,430,635	+		ABIE40_RS17175	0.40	-2.2
3,430,635	+		ABIE40_RS17175	0.40	+2.4
3,430,635	+		ABIE40_RS17175	0.40	-0.9
3,430,635	+		ABIE40_RS17175	0.40	-0.6
3,430,635	+		ABIE40_RS17175	0.40	+0.2
3,430,635	+		ABIE40_RS17175	0.40	+2.5
3,430,635	+		ABIE40_RS17175	0.40	-0.7
3,430,635	+		ABIE40_RS17175	0.40	+1.1
3,430,635	+		ABIE40_RS17175	0.40	-1.7
3,430,635	+		ABIE40_RS17175	0.40	+2.3
3,430,636	-		ABIE40_RS17175	0.41	-4.6
3,430,636	-		ABIE40_RS17175	0.41	-0.0
3,430,636	-		ABIE40_RS17175	0.41	+1.9
3,430,636	-		ABIE40_RS17175	0.41	-2.6
3,430,636	-		ABIE40_RS17175	0.41	-2.7
3,430,636	-		ABIE40_RS17175	0.41	+1.0
3,430,636	-		ABIE40_RS17175	0.41	-1.6
3,430,636	-		ABIE40_RS17175	0.41	-0.3
3,430,636	-		ABIE40_RS17175	0.41	-0.4
3,430,636	-		ABIE40_RS17175	0.41	-1.7
3,430,636	-		ABIE40_RS17175	0.41	+1.2
3,430,734	+		ABIE40_RS17175	0.49	+2.3
3,430,735	-		ABIE40_RS17175	0.49	-1.1
3,431,032	+		ABIE40_RS17175	0.76	+1.3
3,431,033	-		ABIE40_RS17175	0.76	-0.2
3,431,049	+		ABIE40_RS17175	0.78	-0.3
3,431,049	+		ABIE40_RS17175	0.78	+3.1
3,431,050	-		ABIE40_RS17175	0.78	-0.8
3,431,050	-		ABIE40_RS17175	0.78	-1.3
3,431,050	-		ABIE40_RS17175	0.78	-3.8
3,431,144	+		ABIE40_RS17175	0.86	+1.0
3,431,144	+		ABIE40_RS17175	0.86	-0.1
3,431,144	+		ABIE40_RS17175	0.86	+1.5
3,431,144	+		ABIE40_RS17175	0.86	+3.1