Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20895

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
5,151,315	+		CA265_RS20890	0.37	+1.6
5,151,590	+		CA265_RS20890	0.62	+0.9
5,151,772	+		CA265_RS20890	0.79	+0.1
5,151,790	+		CA265_RS20890	0.81	+2.6
5,152,000	-				+0.9
5,152,002	+				+1.8
5,152,045	+				+0.5
5,152,046	-				-0.1
5,152,088	+				+0.4
5,152,110	-				-1.0
5,152,198	+				-2.1
5,152,216	+				-1.2
5,152,232	+				-1.0
5,152,281	-				-1.2
5,152,361	+		CA265_RS20895	0.11	-1.4
5,152,362	-		CA265_RS20895	0.11	-1.7
5,152,389	-		CA265_RS20895	0.12	-1.3
5,152,401	-		CA265_RS20895	0.13	-0.3
5,152,429	+		CA265_RS20895	0.14	-1.3
5,152,495	+		CA265_RS20895	0.17	-1.0
5,152,496	-		CA265_RS20895	0.17	-0.6
5,152,556	+		CA265_RS20895	0.20	-1.4
5,152,592	-		CA265_RS20895	0.21	-1.0
5,152,637	+		CA265_RS20895	0.24	-2.1
5,152,679	+		CA265_RS20895	0.26	-0.7
5,152,680	-		CA265_RS20895	0.26	+0.6
5,152,783	-		CA265_RS20895	0.30	-1.0
5,152,786	+		CA265_RS20895	0.30	-2.7
5,152,807	+		CA265_RS20895	0.31	-2.2
5,152,889	+		CA265_RS20895	0.35	-2.1
5,152,936	-		CA265_RS20895	0.37	-0.3
5,153,042	-		CA265_RS20895	0.42	-0.2
5,153,056	-		CA265_RS20895	0.43	-0.6
5,153,056	-		CA265_RS20895	0.43	-0.3
5,153,056	-		CA265_RS20895	0.43	-1.9
5,153,121	+		CA265_RS20895	0.46	-2.0
5,153,122	-		CA265_RS20895	0.46	+0.7
5,153,123	+		CA265_RS20895	0.46	-1.6
5,153,124	-		CA265_RS20895	0.46	-2.3
5,153,124	-		CA265_RS20895	0.46	-1.2
5,153,145	+		CA265_RS20895	0.47	-1.8
5,153,152	+		CA265_RS20895	0.47	-0.7
5,153,233	+		CA265_RS20895	0.51	-0.3
5,153,247	-		CA265_RS20895	0.52	-0.0
5,153,256	+		CA265_RS20895	0.52	-2.7
5,153,257	-		CA265_RS20895	0.52	-1.8
5,153,257	-		CA265_RS20895	0.52	-1.2
5,153,257	-		CA265_RS20895	0.52	-0.9
5,153,259	-		CA265_RS20895	0.52	-2.1
5,153,276	-		CA265_RS20895	0.53	-1.2
5,153,398	-		CA265_RS20895	0.59	+0.1
5,153,431	+		CA265_RS20895	0.60	-0.7
5,153,528	+		CA265_RS20895	0.65	-1.7
5,153,615	+		CA265_RS20895	0.69	-0.1
5,153,616	-		CA265_RS20895	0.69	+0.1
5,153,616	-		CA265_RS20895	0.69	-0.7
5,153,667	-		CA265_RS20895	0.71	-1.6
5,153,741	-		CA265_RS20895	0.75	-1.1
5,153,743	-		CA265_RS20895	0.75	-1.4
5,153,772	-		CA265_RS20895	0.76	-1.2
5,153,783	-		CA265_RS20895	0.77	-1.3
5,153,882	+		CA265_RS20895	0.81	-0.4
5,153,883	-		CA265_RS20895	0.81	-1.5
5,153,920	-		CA265_RS20895	0.83	-1.2
5,153,932	-		CA265_RS20895	0.84	-0.5
5,153,951	+		CA265_RS20895	0.84	-0.6
5,154,029	-		CA265_RS20895	0.88	-1.2
5,154,036	+		CA265_RS20895	0.88	-1.3
5,154,074	-				-1.3
5,154,134	-				-1.6
5,154,144	-				-0.7
5,154,170	+				+1.3
5,154,188	-				-1.1
5,154,188	-				+0.3
5,154,188	-				-1.7
5,154,188	-				-0.9
5,154,210	-				-0.9
5,154,226	+				-1.2
5,154,390	+				-0.4
5,154,391	-				-1.0
5,154,391	-				-0.1
5,154,391	-				-0.6
5,154,458	+		CA265_RS20900	0.11	-0.7
5,154,458	+		CA265_RS20900	0.11	-0.1
5,154,502	+		CA265_RS20900	0.19	-0.9
5,154,502	+		CA265_RS20900	0.19	+0.0
5,154,537	-		CA265_RS20900	0.25	+0.3
5,154,690	+		CA265_RS20900	0.53	+0.2
5,154,690	+		CA265_RS20900	0.53	+0.1
5,154,691	-		CA265_RS20900	0.54	+0.6
5,154,693	+		CA265_RS20900	0.54	-0.3
5,154,694	-		CA265_RS20900	0.54	-0.5
5,154,694	-		CA265_RS20900	0.54	+0.4
5,154,708	+		CA265_RS20900	0.57	+0.9
5,154,708	+		CA265_RS20900	0.57	-0.3
5,154,817	+		CA265_RS20900	0.77	-1.0
5,154,838	+		CA265_RS20900	0.81	-0.9
5,154,859	-		CA265_RS20900	0.85	+0.1
5,154,889	+				-0.4
5,154,923	-				-0.7