Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20880

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
5,148,998	+				+1.1
5,149,019	-				-1.5
5,149,027	-				+0.1
5,149,027	-				-0.9
5,149,130	-				+0.2
5,149,164	+				+0.4
5,149,165	-				+0.9
5,149,168	+				+2.8
5,149,168	+				-0.7
5,149,169	-				+0.1
5,149,169	-				+0.3
5,149,747	+				-0.3
5,149,748	-				-0.3
5,149,748	-				+0.2
5,149,836	-				-0.1
5,149,845	+				+0.1
5,149,846	-				+0.6
5,149,876	-				-1.9
5,149,893	+				+0.3
5,149,994	-				+0.6
5,150,016	+		CA265_RS20880	0.10	+0.6
5,150,016	+		CA265_RS20880	0.10	-0.6
5,150,041	-		CA265_RS20880	0.14	-0.6
5,150,041	-		CA265_RS20880	0.14	-0.5
5,150,046	+		CA265_RS20880	0.15	-0.7
5,150,069	+		CA265_RS20880	0.19	-1.2
5,150,076	-		CA265_RS20880	0.20	-0.6
5,150,111	-		CA265_RS20880	0.25	-1.0
5,150,170	-		CA265_RS20880	0.34	-1.2
5,150,377	+		CA265_RS20880	0.67	-3.5
5,150,389	-		CA265_RS20880	0.69	-0.9
5,150,453	+		CA265_RS20880	0.79	-0.8
5,150,461	-		CA265_RS20880	0.80	-0.7
5,150,579	+				-1.0
5,150,580	-				+0.1
5,150,605	-				-0.3
5,150,607	+				+0.2
5,150,625	-				+0.9
5,150,866	-				+0.1
5,150,891	-				-1.2
5,150,893	-				-0.8
5,151,315	+		CA265_RS20890	0.37	+1.6