Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09445

Experiment: R2A with Tetracycline 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tetracycline 0.0005 mg/ml
2,339,662	-				-0.2
2,339,689	-				-0.1
2,339,689	-				+0.1
2,339,691	-				+0.0
2,339,756	+				-0.1
2,339,822	+				-1.7
2,339,858	-				+0.9
2,339,989	-				+0.1
2,340,070	+				-0.8
2,340,177	-				-0.0
2,340,211	+				-1.3
2,340,212	-				-2.9
2,340,304	-				-2.4
2,340,313	+				-2.5
2,340,314	-				-2.4
2,340,314	-				-2.1
2,340,316	-				-1.9
2,340,357	-		CA265_RS09445	0.12	-3.3
2,340,380	+		CA265_RS09445	0.14	-3.4
2,340,414	+		CA265_RS09445	0.16	-1.5
2,340,479	-		CA265_RS09445	0.22	-2.7
2,340,485	+		CA265_RS09445	0.22	-2.8
2,340,485	+		CA265_RS09445	0.22	-3.0
2,340,485	+		CA265_RS09445	0.22	-0.0
2,340,495	+		CA265_RS09445	0.23	-2.3
2,340,522	+		CA265_RS09445	0.25	-2.4
2,340,547	+		CA265_RS09445	0.27	-1.2
2,340,551	-		CA265_RS09445	0.28	-2.3
2,340,582	-		CA265_RS09445	0.30	-1.8
2,340,663	+		CA265_RS09445	0.37	-1.3
2,340,675	+		CA265_RS09445	0.38	-2.7
2,340,732	+				-0.8
2,340,738	+		CA265_RS09445	0.43	-2.2
2,340,752	+		CA265_RS09445	0.44	+0.1
2,340,753	-		CA265_RS09445	0.44	-0.9
2,340,763	+		CA265_RS09445	0.45	-2.9
2,340,764	-		CA265_RS09445	0.45	-3.0
2,340,867	+		CA265_RS09445	0.54	-0.8
2,340,896	+		CA265_RS09445	0.56	-1.3
2,340,936	-		CA265_RS09445	0.59	-1.8
2,340,984	+		CA265_RS09445	0.63	-2.2
2,341,027	-		CA265_RS09445	0.67	-3.5
2,341,087	-		CA265_RS09445	0.72	-1.5
2,341,087	-		CA265_RS09445	0.72	-1.7
2,341,212	+		CA265_RS09445	0.82	-2.9
2,341,257	+		CA265_RS09445	0.86	-2.4
2,341,358	-				-4.5
2,341,359	+				-1.9
2,341,435	+				+0.4
2,341,435	+				+0.2
2,341,435	+				+0.1
2,341,451	-				-2.3
2,341,530	+				-1.0
2,341,531	-				-1.2
2,341,555	+				-0.4
2,341,556	-				-2.1
2,341,561	-				-2.2
2,341,618	+				+0.3
2,341,618	+				+0.0
2,341,691	+				+0.1
2,341,700	+				+0.3
2,341,755	+				+0.5
2,341,755	+				+1.1
2,341,756	-				-2.5
2,341,766	+				-0.2
2,341,813	-				-1.0
2,341,829	+				+0.2
2,341,830	-				-2.1
2,341,941	+		CA265_RS09450	0.18	-0.8
2,342,183	+		CA265_RS09450	0.36	+0.2
2,342,184	-				-0.8
2,342,184	-		CA265_RS09450	0.36	+1.1
2,342,265	+		CA265_RS09450	0.42	+0.4
2,342,265	+		CA265_RS09450	0.42	+0.2
2,342,265	+		CA265_RS09450	0.42	+0.1
2,342,269	+		CA265_RS09450	0.42	-0.1
2,342,270	-		CA265_RS09450	0.42	-2.1
2,342,356	-		CA265_RS09450	0.49	-1.3
2,342,356	-		CA265_RS09450	0.49	-0.1
2,342,356	-		CA265_RS09450	0.49	-0.7
2,342,378	-		CA265_RS09450	0.50	-1.5
2,342,378	-		CA265_RS09450	0.50	-1.1
2,342,382	+		CA265_RS09450	0.50	+0.8
2,342,390	+		CA265_RS09450	0.51	-0.5
2,342,391	-		CA265_RS09450	0.51	+0.4