Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21760 and ABID97_RS21765 are separated by 3 nucleotides ABID97_RS21765 and ABID97_RS21770 overlap by 17 nucleotides ABID97_RS21770 and ABID97_RS21775 are separated by 20 nucleotides
ABID97_RS21760: ABID97_RS21760 - peptide chain release factor 2, at 4,498,068 to 4,499,172
_RS21760
ABID97_RS21765: ABID97_RS21765 - HAD family phosphatase, at 4,499,176 to 4,499,865
_RS21765
ABID97_RS21770: ABID97_RS21770 - aminopeptidase N, at 4,499,849 to 4,502,557
_RS21770
ABID97_RS21775: ABID97_RS21775 - class 1 fructose-bisphosphatase, at 4,502,578 to 4,503,594
_RS21775
Position (kb)
4499
4500
4501
4502
4503 Strain fitness (log2 ratio)
-2
-1
0
1 at 4499.809 kb on + strand at 4499.903 kb on + strand at 4500.266 kb on + strand, within ABID97_RS21770 at 4500.266 kb on + strand, within ABID97_RS21770 at 4500.266 kb on + strand, within ABID97_RS21770 at 4500.266 kb on + strand, within ABID97_RS21770 at 4500.266 kb on + strand, within ABID97_RS21770 at 4500.299 kb on + strand, within ABID97_RS21770 at 4500.431 kb on + strand, within ABID97_RS21770 at 4500.701 kb on + strand, within ABID97_RS21770 at 4500.740 kb on + strand, within ABID97_RS21770 at 4500.773 kb on + strand, within ABID97_RS21770 at 4500.995 kb on + strand, within ABID97_RS21770 at 4501.031 kb on + strand, within ABID97_RS21770 at 4501.031 kb on + strand, within ABID97_RS21770 at 4501.032 kb on - strand, within ABID97_RS21770 at 4501.109 kb on + strand, within ABID97_RS21770 at 4501.224 kb on - strand, within ABID97_RS21770 at 4501.224 kb on - strand, within ABID97_RS21770 at 4501.787 kb on + strand, within ABID97_RS21770 at 4501.787 kb on + strand, within ABID97_RS21770 at 4501.787 kb on + strand, within ABID97_RS21770 at 4501.788 kb on - strand, within ABID97_RS21770 at 4501.895 kb on + strand, within ABID97_RS21770 at 4502.304 kb on - strand at 4502.304 kb on - strand at 4502.351 kb on + strand at 4502.351 kb on + strand at 4502.568 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 4,499,809 + +0.1 4,499,903 + -1.0 4,500,266 + ABID97_RS21770 0.15 -0.2 4,500,266 + ABID97_RS21770 0.15 +0.8 4,500,266 + ABID97_RS21770 0.15 -0.8 4,500,266 + ABID97_RS21770 0.15 -0.9 4,500,266 + ABID97_RS21770 0.15 -0.6 4,500,299 + ABID97_RS21770 0.17 -2.2 4,500,431 + ABID97_RS21770 0.21 -0.6 4,500,701 + ABID97_RS21770 0.31 -1.0 4,500,740 + ABID97_RS21770 0.33 -1.3 4,500,773 + ABID97_RS21770 0.34 -0.3 4,500,995 + ABID97_RS21770 0.42 -0.7 4,501,031 + ABID97_RS21770 0.44 -0.4 4,501,031 + ABID97_RS21770 0.44 -0.5 4,501,032 - ABID97_RS21770 0.44 +0.6 4,501,109 + ABID97_RS21770 0.47 -1.1 4,501,224 - ABID97_RS21770 0.51 +1.2 4,501,224 - ABID97_RS21770 0.51 -1.7 4,501,787 + ABID97_RS21770 0.72 -0.1 4,501,787 + ABID97_RS21770 0.72 -0.4 4,501,787 + ABID97_RS21770 0.72 -0.9 4,501,788 - ABID97_RS21770 0.72 -0.4 4,501,895 + ABID97_RS21770 0.76 -0.8 4,502,304 - +0.3 4,502,304 - -0.8 4,502,351 + -0.0 4,502,351 + -0.2 4,502,568 + -0.7
Or see this region's nucleotide sequence