Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18200

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
4,537,689	-				+0.4
4,537,712	+				+0.1
4,537,820	-				-0.1
4,537,820	-				+0.3
4,537,895	-		CA265_RS18195	0.13	-0.3
4,537,926	-		CA265_RS18195	0.18	-0.7
4,537,963	+		CA265_RS18195	0.24	-0.1
4,538,018	+		CA265_RS18195	0.33	-2.2
4,538,115	-		CA265_RS18195	0.49	+0.5
4,538,165	-		CA265_RS18195	0.58	+1.1
4,538,177	-		CA265_RS18195	0.60	+0.5
4,538,190	+		CA265_RS18195	0.62	-1.2
4,538,253	-		CA265_RS18195	0.72	+0.7
4,538,265	-		CA265_RS18195	0.74	+0.4
4,538,392	-				+0.5
4,538,467	-				-1.9
4,538,496	-				-0.4
4,538,499	-				+0.6
4,538,549	-				+0.6
4,538,551	-				-0.2
4,538,593	+				+1.0
4,538,595	+				-0.1
4,538,601	+				-0.2
4,538,601	+				+1.1
4,538,601	+				-0.2
4,538,602	-				-0.8
4,538,610	-				+0.2
4,538,627	+				-0.1
4,538,627	+				+0.5
4,538,648	-				+1.1
4,538,651	-				-1.4
4,538,657	+				-0.0
4,538,657	+				+0.3
4,538,757	+		CA265_RS18200	0.25	+1.0
4,538,799	-		CA265_RS18200	0.35	-0.5
4,538,856	-		CA265_RS18200	0.49	+0.2
4,538,878	+		CA265_RS18200	0.54	-0.8
4,538,899	-		CA265_RS18200	0.59	-0.7
4,538,970	-		CA265_RS18200	0.75	-0.7
4,538,991	-		CA265_RS18200	0.80	-1.5
4,538,994	+		CA265_RS18200	0.81	-1.1
4,538,995	-		CA265_RS18200	0.81	+0.3
4,539,058	-				+1.3
4,539,105	-				-0.1
4,539,116	+				+0.5
4,539,158	-				-0.2
4,539,265	-		CA265_RS18205	0.11	-0.4
4,539,292	+		CA265_RS18205	0.14	-0.4
4,539,436	+		CA265_RS18205	0.30	+0.7
4,539,441	-		CA265_RS18205	0.31	+0.8
4,539,442	+		CA265_RS18205	0.31	+1.1
4,539,449	-		CA265_RS18205	0.32	+0.2
4,539,505	+		CA265_RS18205	0.38	-0.5
4,539,527	+		CA265_RS18205	0.41	-0.0
4,539,528	-		CA265_RS18205	0.41	-0.7
4,539,645	+		CA265_RS18205	0.54	-0.4
4,539,673	+		CA265_RS18205	0.57	-0.5
4,539,673	+		CA265_RS18205	0.57	-0.6
4,539,737	-		CA265_RS18205	0.65	+1.1
4,539,776	-		CA265_RS18205	0.69	-0.3
4,539,857	+		CA265_RS18205	0.78	+0.2
4,539,858	-		CA265_RS18205	0.78	+0.3
4,539,878	-		CA265_RS18205	0.81	-0.5
4,539,924	-		CA265_RS18205	0.86	+0.2
4,539,924	-		CA265_RS18205	0.86	+0.1
4,539,950	-		CA265_RS18205	0.89	-0.1
4,539,950	-		CA265_RS18205	0.89	+0.3
4,539,958	+		CA265_RS18205	0.90	-1.4
4,539,959	-		CA265_RS18205	0.90	-0.6
4,540,014	-				-1.4
4,540,029	-				+0.7
4,540,034	-				+0.5